Optimisation of a machine learning algorithm in human locomotion using principal component and discriminant function analyses
Assessment methods in human locomotion often involve the description of normalised graphical profiles and/or the extraction of discrete variables. Whilst useful, these approaches may not represent the full complexity of gait data. Multivariate statistical methods, such as Principal Component Analysi...
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description | Assessment methods in human locomotion often involve the description of normalised graphical profiles and/or the extraction of discrete variables. Whilst useful, these approaches may not represent the full complexity of gait data. Multivariate statistical methods, such as Principal Component Analysis (PCA) and Discriminant Function Analysis (DFA), have been adopted since they have the potential to overcome these data handling issues. The aim of the current study was to develop and optimise a specific machine learning algorithm for processing human locomotion data. Twenty participants ran at a self-selected speed across a 15m runway in barefoot and shod conditions. Ground reaction forces (BW) and kinematics were measured at 1000 Hz and 100 Hz, respectively from which joint angles (°), joint moments (N.m.kg-1) and joint powers (W.kg-1) for the hip, knee and ankle joints were calculated in all three anatomical planes. Using PCA and DFA, power spectra of the kinematic and kinetic variables were used as a training database for the development of a machine learning algorithm. All possible combinations of 10 out of 20 participants were explored to find the iteration of individuals that would optimise the machine learning algorithm. The results showed that the algorithm was able to successfully predict whether a participant ran shod or barefoot in 93.5% of cases. To the authors' knowledge, this is the first study to optimise the development of a machine learning algorithm. |
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Whilst useful, these approaches may not represent the full complexity of gait data. Multivariate statistical methods, such as Principal Component Analysis (PCA) and Discriminant Function Analysis (DFA), have been adopted since they have the potential to overcome these data handling issues. The aim of the current study was to develop and optimise a specific machine learning algorithm for processing human locomotion data. Twenty participants ran at a self-selected speed across a 15m runway in barefoot and shod conditions. Ground reaction forces (BW) and kinematics were measured at 1000 Hz and 100 Hz, respectively from which joint angles (°), joint moments (N.m.kg-1) and joint powers (W.kg-1) for the hip, knee and ankle joints were calculated in all three anatomical planes. Using PCA and DFA, power spectra of the kinematic and kinetic variables were used as a training database for the development of a machine learning algorithm. All possible combinations of 10 out of 20 participants were explored to find the iteration of individuals that would optimise the machine learning algorithm. The results showed that the algorithm was able to successfully predict whether a participant ran shod or barefoot in 93.5% of cases. To the authors' knowledge, this is the first study to optimise the development of a machine learning algorithm.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0183990</identifier><identifier>PMID: 28886059</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Adult ; Algorithms ; Amputation ; Ankle ; Arthritis ; Artificial intelligence ; Biology and Life Sciences ; Biomechanics ; Classification ; Computer and Information Sciences ; Data processing ; Discriminant Analysis ; Female ; Function analysis ; Gait ; Hip ; Humans ; Kinematics ; Knee ; Learning algorithms ; Locomotion ; Machine Learning ; Male ; Medicine and Health Sciences ; Methods ; Multivariate analysis ; Physical Sciences ; Planes ; Power spectra ; Principal Component Analysis ; Principal components analysis ; Reproducibility of Results ; Research and Analysis Methods ; Researchers ; Statistical analysis ; Statistical methods ; Studies ; Variables ; Workflow ; Young Adult</subject><ispartof>PloS one, 2017-09, Vol.12 (9), p.e0183990-e0183990</ispartof><rights>2017 Bisele et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 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Whilst useful, these approaches may not represent the full complexity of gait data. Multivariate statistical methods, such as Principal Component Analysis (PCA) and Discriminant Function Analysis (DFA), have been adopted since they have the potential to overcome these data handling issues. The aim of the current study was to develop and optimise a specific machine learning algorithm for processing human locomotion data. Twenty participants ran at a self-selected speed across a 15m runway in barefoot and shod conditions. Ground reaction forces (BW) and kinematics were measured at 1000 Hz and 100 Hz, respectively from which joint angles (°), joint moments (N.m.kg-1) and joint powers (W.kg-1) for the hip, knee and ankle joints were calculated in all three anatomical planes. Using PCA and DFA, power spectra of the kinematic and kinetic variables were used as a training database for the development of a machine learning algorithm. All possible combinations of 10 out of 20 participants were explored to find the iteration of individuals that would optimise the machine learning algorithm. The results showed that the algorithm was able to successfully predict whether a participant ran shod or barefoot in 93.5% of cases. 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locomotion using principal component and discriminant function analyses</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2017-09-08</date><risdate>2017</risdate><volume>12</volume><issue>9</issue><spage>e0183990</spage><epage>e0183990</epage><pages>e0183990-e0183990</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Assessment methods in human locomotion often involve the description of normalised graphical profiles and/or the extraction of discrete variables. Whilst useful, these approaches may not represent the full complexity of gait data. Multivariate statistical methods, such as Principal Component Analysis (PCA) and Discriminant Function Analysis (DFA), have been adopted since they have the potential to overcome these data handling issues. The aim of the current study was to develop and optimise a specific machine learning algorithm for processing human locomotion data. Twenty participants ran at a self-selected speed across a 15m runway in barefoot and shod conditions. Ground reaction forces (BW) and kinematics were measured at 1000 Hz and 100 Hz, respectively from which joint angles (°), joint moments (N.m.kg-1) and joint powers (W.kg-1) for the hip, knee and ankle joints were calculated in all three anatomical planes. Using PCA and DFA, power spectra of the kinematic and kinetic variables were used as a training database for the development of a machine learning algorithm. All possible combinations of 10 out of 20 participants were explored to find the iteration of individuals that would optimise the machine learning algorithm. The results showed that the algorithm was able to successfully predict whether a participant ran shod or barefoot in 93.5% of cases. To the authors' knowledge, this is the first study to optimise the development of a machine learning algorithm.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>28886059</pmid><doi>10.1371/journal.pone.0183990</doi><orcidid>https://orcid.org/0000-0001-6898-9095</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Adult Algorithms Amputation Ankle Arthritis Artificial intelligence Biology and Life Sciences Biomechanics Classification Computer and Information Sciences Data processing Discriminant Analysis Female Function analysis Gait Hip Humans Kinematics Knee Learning algorithms Locomotion Machine Learning Male Medicine and Health Sciences Methods Multivariate analysis Physical Sciences Planes Power spectra Principal Component Analysis Principal components analysis Reproducibility of Results Research and Analysis Methods Researchers Statistical analysis Statistical methods Studies Variables Workflow Young Adult |
title | Optimisation of a machine learning algorithm in human locomotion using principal component and discriminant function analyses |
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