In silico analysis to identify vaccine candidates common to multiple serotypes of Shigella and evaluation of their immunogenicity
Shigellosis or bacillary dysentery is an important cause of diarrhea, with the majority of the cases occurring in developing countries. Considering the high disease burden, increasing antibiotic resistance, serotype-specific immunity and the post-infectious sequelae associated with shigellosis, ther...
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description | Shigellosis or bacillary dysentery is an important cause of diarrhea, with the majority of the cases occurring in developing countries. Considering the high disease burden, increasing antibiotic resistance, serotype-specific immunity and the post-infectious sequelae associated with shigellosis, there is a pressing need of an effective vaccine against multiple serotypes of the pathogen. In the present study, we used bio-informatics approach to identify antigens shared among multiple serotypes of Shigella spp. This approach led to the identification of many immunogenic peptides. The five most promising peptides based on MHC binding efficiency were a putative lipoprotein (EL PGI I), a putative heat shock protein (EL PGI II), Spa32 (EL PGI III), IcsB (EL PGI IV) and a hypothetical protein (EL PGI V). These peptides were synthesized and the immunogenicity was evaluated in BALB/c mice by ELISA and cytokine assays. The putative heat shock protein (HSP) and the hypothetical protein elicited good humoral response, whereas putative lipoprotein, Spa32 and IcsB elicited good T-cell response as revealed by increased IFN-γ and TNF-α cytokine levels. The patient sera from confirmed cases of shigellosis were also evaluated for the presence of peptide specific antibodies with significant IgG and IgA antibodies against the HSP and the hypothetical protein, bestowing them as potential future vaccine candidates. The antigens reported in this study are novel and have not been tested as vaccine candidates against Shigella. This study offers time and cost-effective way of identifying unprecedented immunogenic antigens to be used as potential vaccine candidates. Moreover, this approach should easily be extendable to find new potential vaccine candidates for other pathogenic bacteria. |
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Considering the high disease burden, increasing antibiotic resistance, serotype-specific immunity and the post-infectious sequelae associated with shigellosis, there is a pressing need of an effective vaccine against multiple serotypes of the pathogen. In the present study, we used bio-informatics approach to identify antigens shared among multiple serotypes of Shigella spp. This approach led to the identification of many immunogenic peptides. The five most promising peptides based on MHC binding efficiency were a putative lipoprotein (EL PGI I), a putative heat shock protein (EL PGI II), Spa32 (EL PGI III), IcsB (EL PGI IV) and a hypothetical protein (EL PGI V). These peptides were synthesized and the immunogenicity was evaluated in BALB/c mice by ELISA and cytokine assays. The putative heat shock protein (HSP) and the hypothetical protein elicited good humoral response, whereas putative lipoprotein, Spa32 and IcsB elicited good T-cell response as revealed by increased IFN-γ and TNF-α cytokine levels. The patient sera from confirmed cases of shigellosis were also evaluated for the presence of peptide specific antibodies with significant IgG and IgA antibodies against the HSP and the hypothetical protein, bestowing them as potential future vaccine candidates. The antigens reported in this study are novel and have not been tested as vaccine candidates against Shigella. This study offers time and cost-effective way of identifying unprecedented immunogenic antigens to be used as potential vaccine candidates. Moreover, this approach should easily be extendable to find new potential vaccine candidates for other pathogenic bacteria.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0180505</identifier><identifier>PMID: 28767653</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Algorithms ; Analysis ; Animals ; Antibiotic resistance ; Antibiotics ; Antibodies ; Antibodies, Bacterial - blood ; Antigens ; Bacillary dysentery ; Bacteria ; Bioinformatics ; Biology and Life Sciences ; Care and treatment ; Complications ; Cytokines ; Cytokines - analysis ; Databases, Protein ; Developing countries ; Diagnosis ; Diarrhea ; Disease resistance ; Dysentery ; Dysentery, Bacillary - immunology ; Dysentery, Bacillary - microbiology ; Enzyme-Linked Immunosorbent Assay ; Epidemics ; Epitopes - immunology ; Health education ; Heat shock proteins ; Heat-Shock Proteins - immunology ; Immune response (humoral) ; Immunity ; Immunogenetics ; Immunogenicity ; Immunoglobulin A ; Immunoglobulin A - blood ; Immunoglobulin G ; Immunoglobulin G - blood ; Informatics ; Interferon-gamma - analysis ; LDCs ; Lymphocytes T ; Major histocompatibility complex ; Medicine and Health Sciences ; Mice ; Mice, Inbred BALB C ; Pathogens ; Peptides ; Peptides - immunology ; Process controls ; Proteins ; Research and Analysis Methods ; Rodents ; Serogroup ; Serotypes ; Shigella - classification ; Shigella - immunology ; Shigella Vaccines - immunology ; Shigellosis ; Streptococcus infections ; Studies ; Tumor necrosis factor ; Tumor Necrosis Factor-alpha - analysis ; Vaccines ; Waterborne diseases ; γ-Interferon</subject><ispartof>PloS one, 2017-08, Vol.12 (8), p.e0180505-e0180505</ispartof><rights>COPYRIGHT 2017 Public Library of Science</rights><rights>2017 Pahil et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 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Considering the high disease burden, increasing antibiotic resistance, serotype-specific immunity and the post-infectious sequelae associated with shigellosis, there is a pressing need of an effective vaccine against multiple serotypes of the pathogen. In the present study, we used bio-informatics approach to identify antigens shared among multiple serotypes of Shigella spp. This approach led to the identification of many immunogenic peptides. The five most promising peptides based on MHC binding efficiency were a putative lipoprotein (EL PGI I), a putative heat shock protein (EL PGI II), Spa32 (EL PGI III), IcsB (EL PGI IV) and a hypothetical protein (EL PGI V). These peptides were synthesized and the immunogenicity was evaluated in BALB/c mice by ELISA and cytokine assays. 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pahil, Sapna</au><au>Taneja, Neelam</au><au>Ansari, Hifzur Rahman</au><au>Raghava, G P S</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>In silico analysis to identify vaccine candidates common to multiple serotypes of Shigella and evaluation of their immunogenicity</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2017-08-02</date><risdate>2017</risdate><volume>12</volume><issue>8</issue><spage>e0180505</spage><epage>e0180505</epage><pages>e0180505-e0180505</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Shigellosis or bacillary dysentery is an important cause of diarrhea, with the majority of the cases occurring in developing countries. Considering the high disease burden, increasing antibiotic resistance, serotype-specific immunity and the post-infectious sequelae associated with shigellosis, there is a pressing need of an effective vaccine against multiple serotypes of the pathogen. In the present study, we used bio-informatics approach to identify antigens shared among multiple serotypes of Shigella spp. This approach led to the identification of many immunogenic peptides. The five most promising peptides based on MHC binding efficiency were a putative lipoprotein (EL PGI I), a putative heat shock protein (EL PGI II), Spa32 (EL PGI III), IcsB (EL PGI IV) and a hypothetical protein (EL PGI V). These peptides were synthesized and the immunogenicity was evaluated in BALB/c mice by ELISA and cytokine assays. The putative heat shock protein (HSP) and the hypothetical protein elicited good humoral response, whereas putative lipoprotein, Spa32 and IcsB elicited good T-cell response as revealed by increased IFN-γ and TNF-α cytokine levels. The patient sera from confirmed cases of shigellosis were also evaluated for the presence of peptide specific antibodies with significant IgG and IgA antibodies against the HSP and the hypothetical protein, bestowing them as potential future vaccine candidates. The antigens reported in this study are novel and have not been tested as vaccine candidates against Shigella. This study offers time and cost-effective way of identifying unprecedented immunogenic antigens to be used as potential vaccine candidates. Moreover, this approach should easily be extendable to find new potential vaccine candidates for other pathogenic bacteria.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>28767653</pmid><doi>10.1371/journal.pone.0180505</doi><tpages>e0180505</tpages><orcidid>https://orcid.org/0000-0003-1198-6138</orcidid><oa>free_for_read</oa></addata></record> |
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recordid | cdi_plos_journals_1926447660 |
source | MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; Free Full-Text Journals in Chemistry; Public Library of Science (PLoS) |
subjects | Algorithms Analysis Animals Antibiotic resistance Antibiotics Antibodies Antibodies, Bacterial - blood Antigens Bacillary dysentery Bacteria Bioinformatics Biology and Life Sciences Care and treatment Complications Cytokines Cytokines - analysis Databases, Protein Developing countries Diagnosis Diarrhea Disease resistance Dysentery Dysentery, Bacillary - immunology Dysentery, Bacillary - microbiology Enzyme-Linked Immunosorbent Assay Epidemics Epitopes - immunology Health education Heat shock proteins Heat-Shock Proteins - immunology Immune response (humoral) Immunity Immunogenetics Immunogenicity Immunoglobulin A Immunoglobulin A - blood Immunoglobulin G Immunoglobulin G - blood Informatics Interferon-gamma - analysis LDCs Lymphocytes T Major histocompatibility complex Medicine and Health Sciences Mice Mice, Inbred BALB C Pathogens Peptides Peptides - immunology Process controls Proteins Research and Analysis Methods Rodents Serogroup Serotypes Shigella - classification Shigella - immunology Shigella Vaccines - immunology Shigellosis Streptococcus infections Studies Tumor necrosis factor Tumor Necrosis Factor-alpha - analysis Vaccines Waterborne diseases γ-Interferon |
title | In silico analysis to identify vaccine candidates common to multiple serotypes of Shigella and evaluation of their immunogenicity |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-01T18%3A53%3A59IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=In%20silico%20analysis%20to%20identify%20vaccine%20candidates%20common%20to%20multiple%20serotypes%20of%20Shigella%20and%20evaluation%20of%20their%20immunogenicity&rft.jtitle=PloS%20one&rft.au=Pahil,%20Sapna&rft.date=2017-08-02&rft.volume=12&rft.issue=8&rft.spage=e0180505&rft.epage=e0180505&rft.pages=e0180505-e0180505&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0180505&rft_dat=%3Cgale_plos_%3EA499765819%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1926447660&rft_id=info:pmid/28767653&rft_galeid=A499765819&rft_doaj_id=oai_doaj_org_article_40b9151aaf714364a87e5333c6ca0318&rfr_iscdi=true |