The infection staging and profile of genotypic distribution and drug resistance mutation among the human immunodeficiency virus-1 infected blood donors from five Chinese blood centers, 2012-2014

The increasing complexity and diversity of the human immunodeficiency virus-1 (HIV-1) infections challenge the disease control and anti-retrovirus treatment in China. The infection stages and molecular characteristics of HIV-1 from infected Chinese blood donors were examined to shed light on the HIV...

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Veröffentlicht in:PloS one 2017-06, Vol.12 (6), p.e0179328-e0179328
Hauptverfasser: Zeng, Peibin, Liu, Yu, He, Miao, Wang, Jingxing, Keating, Sheila, Mao, Wei, Huang, Mei, Ma, Hongli, He, Weilan, Bi, Xinhong, Liao, Dan, Busch, Michael, Ness, Paul, Liu, Jing, Shan, Hua
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container_start_page e0179328
container_title PloS one
container_volume 12
creator Zeng, Peibin
Liu, Yu
He, Miao
Wang, Jingxing
Keating, Sheila
Mao, Wei
Huang, Mei
Ma, Hongli
He, Weilan
Bi, Xinhong
Liao, Dan
Busch, Michael
Ness, Paul
Liu, Jing
Shan, Hua
description The increasing complexity and diversity of the human immunodeficiency virus-1 (HIV-1) infections challenge the disease control and anti-retrovirus treatment in China. The infection stages and molecular characteristics of HIV-1 from infected Chinese blood donors were examined to shed light on the HIV genotype distribution and the status of drug resistance mutations (DRMs) in the changing HIV epidemic in China. Western blot (WB) confirmed HIV-1 positive plasma samples were collected from blood donors at five Chinese blood centers from April 16, 2012, through June 30, 2014. The HIV infection stages were determined using the Lag-avidity assay. HIV Pol regions including whole protease and partial reverse transcriptase (RT) were amplified and sequenced to establish the profile of genotype distribution and drug resistance mutations (DRMs). Viral loads were determined using the ROCHE COBAS system. Of the 259 HIV-1 positive samples tested by the Lag-avidity assay, 23.6% (61/259) were identified as recent infections. A total of 205 amplified sequences displayed the following genotype distributions: circulating recombinant form (CRF) 07_BC (61.5%), CRF08_BC (8.3%), CRF01_AE (20%), B (6.3%), and 01B (3.9%). There was no significant difference in genotype distribution between recent and long-term infections. 31 DRMs were identified from 27 samples including four protease inhibitors (PIs) accessory DRMs, two PIs major DRMs (M46I), two nucleoside RT inhibitors DRMs (K219R and K70Q), and 23 nonnucleoside RT inhibitors DRMs. 27 samples had DRMs, yielding a drug resistance prevalence of 13.2% (27/205). Our findings provide important information for developing strategies for comprehensive HIV control and improving anti-retroviral treatment in China.
doi_str_mv 10.1371/journal.pone.0179328
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The infection stages and molecular characteristics of HIV-1 from infected Chinese blood donors were examined to shed light on the HIV genotype distribution and the status of drug resistance mutations (DRMs) in the changing HIV epidemic in China. Western blot (WB) confirmed HIV-1 positive plasma samples were collected from blood donors at five Chinese blood centers from April 16, 2012, through June 30, 2014. The HIV infection stages were determined using the Lag-avidity assay. HIV Pol regions including whole protease and partial reverse transcriptase (RT) were amplified and sequenced to establish the profile of genotype distribution and drug resistance mutations (DRMs). Viral loads were determined using the ROCHE COBAS system. Of the 259 HIV-1 positive samples tested by the Lag-avidity assay, 23.6% (61/259) were identified as recent infections. A total of 205 amplified sequences displayed the following genotype distributions: circulating recombinant form (CRF) 07_BC (61.5%), CRF08_BC (8.3%), CRF01_AE (20%), B (6.3%), and 01B (3.9%). There was no significant difference in genotype distribution between recent and long-term infections. 31 DRMs were identified from 27 samples including four protease inhibitors (PIs) accessory DRMs, two PIs major DRMs (M46I), two nucleoside RT inhibitors DRMs (K219R and K70Q), and 23 nonnucleoside RT inhibitors DRMs. 27 samples had DRMs, yielding a drug resistance prevalence of 13.2% (27/205). Our findings provide important information for developing strategies for comprehensive HIV control and improving anti-retroviral treatment in China.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0179328</identifier><identifier>PMID: 28622345</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Accessories ; Acquired immune deficiency syndrome ; Adolescent ; Adult ; AIDS ; Amplification ; Antimicrobial agents ; Antiretroviral drugs ; Asian People ; Assaying ; Avidity ; Biodiversity ; Biology and Life Sciences ; Blood ; Blood Banks ; Blood Donors ; China - epidemiology ; Complexity ; Disease control ; Disease resistance ; Distribution ; Drug resistance ; Drug Resistance, Viral - genetics ; Epidemics ; Female ; Genetic aspects ; Genotype ; HIV ; HIV Infections - drug therapy ; HIV Infections - epidemiology ; HIV Infections - genetics ; HIV Protease - genetics ; HIV Protease Inhibitors - administration &amp; dosage ; HIV Reverse Transcriptase - genetics ; HIV-1 - genetics ; Human immunodeficiency virus ; Humans ; Infections ; Information dissemination ; Load resistance ; Loads (forces) ; Male ; Medicine and health sciences ; Microbial drug resistance ; Middle Aged ; Mutation ; People and Places ; Protease ; Protease inhibitors ; Proteinase ; Proteinase inhibitors ; Reverse Transcriptase Inhibitors - administration &amp; dosage ; RNA-directed DNA polymerase ; Stress concentration ; Viral Load - methods ; Viruses</subject><ispartof>PloS one, 2017-06, Vol.12 (6), p.e0179328-e0179328</ispartof><rights>COPYRIGHT 2017 Public Library of Science</rights><rights>2017 Zeng et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 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The infection stages and molecular characteristics of HIV-1 from infected Chinese blood donors were examined to shed light on the HIV genotype distribution and the status of drug resistance mutations (DRMs) in the changing HIV epidemic in China. Western blot (WB) confirmed HIV-1 positive plasma samples were collected from blood donors at five Chinese blood centers from April 16, 2012, through June 30, 2014. The HIV infection stages were determined using the Lag-avidity assay. HIV Pol regions including whole protease and partial reverse transcriptase (RT) were amplified and sequenced to establish the profile of genotype distribution and drug resistance mutations (DRMs). Viral loads were determined using the ROCHE COBAS system. Of the 259 HIV-1 positive samples tested by the Lag-avidity assay, 23.6% (61/259) were identified as recent infections. 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Our findings provide important information for developing strategies for comprehensive HIV control and improving anti-retroviral treatment in China.</description><subject>Accessories</subject><subject>Acquired immune deficiency syndrome</subject><subject>Adolescent</subject><subject>Adult</subject><subject>AIDS</subject><subject>Amplification</subject><subject>Antimicrobial agents</subject><subject>Antiretroviral drugs</subject><subject>Asian People</subject><subject>Assaying</subject><subject>Avidity</subject><subject>Biodiversity</subject><subject>Biology and Life Sciences</subject><subject>Blood</subject><subject>Blood Banks</subject><subject>Blood Donors</subject><subject>China - epidemiology</subject><subject>Complexity</subject><subject>Disease control</subject><subject>Disease resistance</subject><subject>Distribution</subject><subject>Drug resistance</subject><subject>Drug Resistance, Viral - genetics</subject><subject>Epidemics</subject><subject>Female</subject><subject>Genetic aspects</subject><subject>Genotype</subject><subject>HIV</subject><subject>HIV Infections - drug therapy</subject><subject>HIV Infections - epidemiology</subject><subject>HIV Infections - genetics</subject><subject>HIV Protease - genetics</subject><subject>HIV Protease Inhibitors - administration &amp; dosage</subject><subject>HIV Reverse Transcriptase - genetics</subject><subject>HIV-1 - genetics</subject><subject>Human immunodeficiency virus</subject><subject>Humans</subject><subject>Infections</subject><subject>Information dissemination</subject><subject>Load resistance</subject><subject>Loads (forces)</subject><subject>Male</subject><subject>Medicine and health sciences</subject><subject>Microbial drug resistance</subject><subject>Middle Aged</subject><subject>Mutation</subject><subject>People and Places</subject><subject>Protease</subject><subject>Protease inhibitors</subject><subject>Proteinase</subject><subject>Proteinase inhibitors</subject><subject>Reverse Transcriptase Inhibitors - administration &amp; dosage</subject><subject>RNA-directed DNA polymerase</subject><subject>Stress concentration</subject><subject>Viral Load - methods</subject><subject>Viruses</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNqNk21rFDEQxxdRbK1-A9GAIAremWweNvtGKIcPhUJBq29DLjvZS9lNrslusV_PT2a2ty096QtZ2ITMb_6TmcwUxUuCl4RW5ONFGKPX3XIbPCwxqWpaykfFIcnrQpSYPr63PyiepXSBMadSiKfFQSlFWVLGD4s_5xtAzlswgwsepUG3zrdI-wZtY7CuAxQsasGH4XrrDGpcGqJbjzf0RDVxbFGElM-1N4D6cdA7Yx-y0JDlN2OvPXJ9P_rQgHXGgTfX6MrFMS3IHB0atO5CyILBh5iQjaFH1l0BWm2chwSz2YAfIKYPqMSkXOQfe148sbpL8GJej4qfXz6fr74tTs--nqyOTxdG1OWwaFhlOYbG6gZTTqu11BVUvGFCcwJrIWvBpagxCBAV0NpogQnhABIEW2tMj4rXO91tF5Kay58UqQlmEnNWZeJkRzRBX6htdL2O1ypop24OQmyVjoMzHSjDpLSyYpQzyyita10aa2sKWlotS561Ps3RxnUPzZR21N2e6L7Fu41qw5WaLsIpywLvZoEYLkdIg-pdMtB12kMYd_euallLkdE3_6APZzdTrc4J5FcLOa6ZRNUxq3mFBeYyU8sHqPw10DuTe3XqqX2H93sOmRng99DqMSV18uP7_7Nnv_bZt_fYDehu2KTQ3XRu2gfZDjQxpBTB3hWZYDWN2m011DRqah617Pbq_gPdOd3OFv0L7wkmlg</recordid><startdate>20170616</startdate><enddate>20170616</enddate><creator>Zeng, Peibin</creator><creator>Liu, Yu</creator><creator>He, Miao</creator><creator>Wang, Jingxing</creator><creator>Keating, Sheila</creator><creator>Mao, Wei</creator><creator>Huang, Mei</creator><creator>Ma, Hongli</creator><creator>He, Weilan</creator><creator>Bi, Xinhong</creator><creator>Liao, Dan</creator><creator>Busch, Michael</creator><creator>Ness, Paul</creator><creator>Liu, Jing</creator><creator>Shan, Hua</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20170616</creationdate><title>The infection staging and profile of genotypic distribution and drug resistance mutation among the human immunodeficiency virus-1 infected blood donors from five Chinese blood centers, 2012-2014</title><author>Zeng, Peibin ; 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The infection stages and molecular characteristics of HIV-1 from infected Chinese blood donors were examined to shed light on the HIV genotype distribution and the status of drug resistance mutations (DRMs) in the changing HIV epidemic in China. Western blot (WB) confirmed HIV-1 positive plasma samples were collected from blood donors at five Chinese blood centers from April 16, 2012, through June 30, 2014. The HIV infection stages were determined using the Lag-avidity assay. HIV Pol regions including whole protease and partial reverse transcriptase (RT) were amplified and sequenced to establish the profile of genotype distribution and drug resistance mutations (DRMs). Viral loads were determined using the ROCHE COBAS system. Of the 259 HIV-1 positive samples tested by the Lag-avidity assay, 23.6% (61/259) were identified as recent infections. A total of 205 amplified sequences displayed the following genotype distributions: circulating recombinant form (CRF) 07_BC (61.5%), CRF08_BC (8.3%), CRF01_AE (20%), B (6.3%), and 01B (3.9%). There was no significant difference in genotype distribution between recent and long-term infections. 31 DRMs were identified from 27 samples including four protease inhibitors (PIs) accessory DRMs, two PIs major DRMs (M46I), two nucleoside RT inhibitors DRMs (K219R and K70Q), and 23 nonnucleoside RT inhibitors DRMs. 27 samples had DRMs, yielding a drug resistance prevalence of 13.2% (27/205). Our findings provide important information for developing strategies for comprehensive HIV control and improving anti-retroviral treatment in China.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>28622345</pmid><doi>10.1371/journal.pone.0179328</doi><tpages>e0179328</tpages><oa>free_for_read</oa></addata></record>
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identifier ISSN: 1932-6203
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1932-6203
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source MEDLINE; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry; Public Library of Science (PLoS)
subjects Accessories
Acquired immune deficiency syndrome
Adolescent
Adult
AIDS
Amplification
Antimicrobial agents
Antiretroviral drugs
Asian People
Assaying
Avidity
Biodiversity
Biology and Life Sciences
Blood
Blood Banks
Blood Donors
China - epidemiology
Complexity
Disease control
Disease resistance
Distribution
Drug resistance
Drug Resistance, Viral - genetics
Epidemics
Female
Genetic aspects
Genotype
HIV
HIV Infections - drug therapy
HIV Infections - epidemiology
HIV Infections - genetics
HIV Protease - genetics
HIV Protease Inhibitors - administration & dosage
HIV Reverse Transcriptase - genetics
HIV-1 - genetics
Human immunodeficiency virus
Humans
Infections
Information dissemination
Load resistance
Loads (forces)
Male
Medicine and health sciences
Microbial drug resistance
Middle Aged
Mutation
People and Places
Protease
Protease inhibitors
Proteinase
Proteinase inhibitors
Reverse Transcriptase Inhibitors - administration & dosage
RNA-directed DNA polymerase
Stress concentration
Viral Load - methods
Viruses
title The infection staging and profile of genotypic distribution and drug resistance mutation among the human immunodeficiency virus-1 infected blood donors from five Chinese blood centers, 2012-2014
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