Different adaptation strategies of two citrus scion/rootstock combinations in response to drought stress

Scion/rootstock interaction is important for plant development and for breeding programs. In this context, polyploid rootstocks presented several advantages, mainly in relation to biotic and abiotic stresses. Here we analyzed the response to drought of two different scion/rootstock combinations pres...

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Veröffentlicht in:PloS one 2017-05, Vol.12 (5), p.e0177993-e0177993
Hauptverfasser: Dutra de Souza, Joadson, de Andrade Silva, Edson Mario, Coelho Filho, Mauricio Antônio, Morillon, Raphaël, Bonatto, Diego, Micheli, Fabienne, da Silva Gesteira, Abelmon
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container_issue 5
container_start_page e0177993
container_title PloS one
container_volume 12
creator Dutra de Souza, Joadson
de Andrade Silva, Edson Mario
Coelho Filho, Mauricio Antônio
Morillon, Raphaël
Bonatto, Diego
Micheli, Fabienne
da Silva Gesteira, Abelmon
description Scion/rootstock interaction is important for plant development and for breeding programs. In this context, polyploid rootstocks presented several advantages, mainly in relation to biotic and abiotic stresses. Here we analyzed the response to drought of two different scion/rootstock combinations presenting different polyploidy: the diploid (2x) and autotetraploid (4x) Rangpur lime (Citrus limonia, Osbeck) rootstocks grafted with 2x Valencia Delta sweet orange (Citrus sinensis) scions, named V/2xRL and V/4xRL, respectively. Based on previous gene expression data, we developed an interactomic approach to identify proteins involved in V/2xRL and V/4xRL response to drought. A main interactomic network containing 3,830 nodes and 97,652 edges was built from V/2xRL and V/4xRL data. Exclusive proteins of the V/2xRL and V/4xRL networks (2,056 and 1,001, respectively), as well as common to both networks (773) were identified. Functional clusters were obtained and two models of drought stress response for the V/2xRL and V/4xRL genotypes were designed. Even if the V/2xRL plant implement some tolerance mechanisms, the global plant response to drought was rapid and quickly exhaustive resulting in a general tendency to dehydration avoidance, which presented some advantage in short and strong drought stress conditions, but which, in long terms, does not allow the plant survival. At the contrary, the V/4xRL plants presented a response which strong impacts on development but that present some advantages in case of prolonged drought. Finally, some specific proteins, which presented high centrality on interactomic analysis were identified as good candidates for subsequent functional analysis of citrus genes related to drought response, as well as be good markers of one or another physiological mechanism implemented by the plants.
doi_str_mv 10.1371/journal.pone.0177993
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development</subject><subject>Citrus - metabolism</subject><subject>Citrus fruits</subject><subject>Citrus sinensis</subject><subject>Competition</subject><subject>Computer and Information Sciences</subject><subject>Conductance</subject><subject>Corn</subject><subject>Cultivars</subject><subject>Defensive behavior</subject><subject>Degradation</subject><subject>Dehydration</subject><subject>Drought</subject><subject>Droughts</subject><subject>Ecology and Environmental Sciences</subject><subject>Engineering</subject><subject>Enzymes</subject><subject>Exposure</subject><subject>Flavonoids</subject><subject>Gene expression</subject><subject>Gene Expression Profiling</subject><subject>Gene Expression Regulation, Plant</subject><subject>Genotypes</subject><subject>Homeostasis</subject><subject>Hormones</subject><subject>Inhibition</subject><subject>Ion channels</subject><subject>Irrigation</subject><subject>Leaves</subject><subject>Lime</subject><subject>Metabolism</subject><subject>Metabolites</subject><subject>Multiplication</subject><subject>Photosynthesis</subject><subject>Physiology</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Plant Roots - genetics</subject><subject>Plant Roots - growth &amp; development</subject><subject>Plant Roots - metabolism</subject><subject>Plant sciences</subject><subject>Plant stress</subject><subject>Plants</subject><subject>Pollen</subject><subject>Polyamines</subject><subject>Polyploidy</subject><subject>Protein Interaction Maps</subject><subject>Proteins</subject><subject>Regulators</subject><subject>Research and Analysis Methods</subject><subject>Respiration</subject><subject>Senescence</subject><subject>Sensors</subject><subject>Signal transduction</subject><subject>Transpiration</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>DOA</sourceid><recordid>eNqNk0uL2zAUhU1p6Uyn_QelFRRKu0hGD9uSNoVh-goMDPS1FTey5Ch1rFSS-_j3VRLPEJdZFC0spO8cXR3rFsVTgueEcXK-9kPooZtvfW_mmHAuJbtXnBLJ6KymmN0_mp8Uj2JcY1wxUdcPixMqqrIipDwtVm-dtSaYPiFoYJsgOd-jmAIk0zoTkbco_fJIuxSGiKLO2-fB-xST19-R9pul6_eiiFyPgom5nmhQ8qgJfmhXaWdmYnxcPLDQRfNk_J4VX9-_-3L5cXZ1_WFxeXE107WkaZaLrWVNTcU5JroxldRMY0ppZYEsm1ISIAJ0jemS8KYkQK21WBgKVmDKgZ0Vzw--285HNYYUFRFSciEEZ5lYHIjGw1ptg9tA-KM8OLVf8KFVEJLTnVEMiBZgcyWYllxiKYixnFGd02uapc5eb8bThuXGNDrnGKCbmE53erdSrf-pqpJVrMLZ4NVoEPyPwcSkNi5q03XQGz_kuiVmpKakrjL64h_07tuNVAv5Aq63Pp-rd6bqIqeXmVKKTM3voPJozMbp_KKsy-sTweuJIDPJ_E4tDDGqxedP_89ef5uyL4_YlYEuraLvhv2LmoLlAdTBxxiMvQ2ZYLVriJs01K4h1NgQWfbs-Afdim46gP0FEUIHkA</recordid><startdate>20170517</startdate><enddate>20170517</enddate><creator>Dutra de Souza, Joadson</creator><creator>de Andrade Silva, Edson Mario</creator><creator>Coelho Filho, Mauricio Antônio</creator><creator>Morillon, Raphaël</creator><creator>Bonatto, Diego</creator><creator>Micheli, Fabienne</creator><creator>da Silva Gesteira, Abelmon</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-9031-362X</orcidid></search><sort><creationdate>20170517</creationdate><title>Different adaptation strategies of two citrus scion/rootstock combinations in response to drought stress</title><author>Dutra de Souza, Joadson ; 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Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>Nursing &amp; Allied Health Database (Alumni Edition)</collection><collection>Meteorological &amp; Geoastrophysical Abstracts - Academic</collection><collection>ProQuest Engineering Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Engineering Database</collection><collection>Nursing &amp; Allied Health Premium</collection><collection>Advanced Technologies &amp; Aerospace Database</collection><collection>ProQuest Advanced Technologies &amp; Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>Materials Science Collection</collection><collection>Access via ProQuest (Open Access)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Engineering Collection</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dutra de Souza, Joadson</au><au>de Andrade Silva, Edson Mario</au><au>Coelho Filho, Mauricio Antônio</au><au>Morillon, Raphaël</au><au>Bonatto, Diego</au><au>Micheli, Fabienne</au><au>da Silva Gesteira, Abelmon</au><au>Aroca, Ricardo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Different adaptation strategies of two citrus scion/rootstock combinations in response to drought stress</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2017-05-17</date><risdate>2017</risdate><volume>12</volume><issue>5</issue><spage>e0177993</spage><epage>e0177993</epage><pages>e0177993-e0177993</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Scion/rootstock interaction is important for plant development and for breeding programs. In this context, polyploid rootstocks presented several advantages, mainly in relation to biotic and abiotic stresses. Here we analyzed the response to drought of two different scion/rootstock combinations presenting different polyploidy: the diploid (2x) and autotetraploid (4x) Rangpur lime (Citrus limonia, Osbeck) rootstocks grafted with 2x Valencia Delta sweet orange (Citrus sinensis) scions, named V/2xRL and V/4xRL, respectively. Based on previous gene expression data, we developed an interactomic approach to identify proteins involved in V/2xRL and V/4xRL response to drought. A main interactomic network containing 3,830 nodes and 97,652 edges was built from V/2xRL and V/4xRL data. Exclusive proteins of the V/2xRL and V/4xRL networks (2,056 and 1,001, respectively), as well as common to both networks (773) were identified. Functional clusters were obtained and two models of drought stress response for the V/2xRL and V/4xRL genotypes were designed. Even if the V/2xRL plant implement some tolerance mechanisms, the global plant response to drought was rapid and quickly exhaustive resulting in a general tendency to dehydration avoidance, which presented some advantage in short and strong drought stress conditions, but which, in long terms, does not allow the plant survival. At the contrary, the V/4xRL plants presented a response which strong impacts on development but that present some advantages in case of prolonged drought. Finally, some specific proteins, which presented high centrality on interactomic analysis were identified as good candidates for subsequent functional analysis of citrus genes related to drought response, as well as be good markers of one or another physiological mechanism implemented by the plants.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>28545114</pmid><doi>10.1371/journal.pone.0177993</doi><tpages>e0177993</tpages><orcidid>https://orcid.org/0000-0002-9031-362X</orcidid><oa>free_for_read</oa></addata></record>
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subjects Abscisic acid
Acclimation
Acclimatization
Acid production
Adaptation, Physiological
Adaptations
Age
Alternative oxidase
Analysis
Autotetraploid
Biochemistry
Biodegradation
Bioinformatics
Biology and Life Sciences
Botany
Breeding
Calcium
Calcium channels
Calcium signalling
Cell culture
Chlorophyll
Citrus
Citrus - genetics
Citrus - growth & development
Citrus - metabolism
Citrus fruits
Citrus sinensis
Competition
Computer and Information Sciences
Conductance
Corn
Cultivars
Defensive behavior
Degradation
Dehydration
Drought
Droughts
Ecology and Environmental Sciences
Engineering
Enzymes
Exposure
Flavonoids
Gene expression
Gene Expression Profiling
Gene Expression Regulation, Plant
Genotypes
Homeostasis
Hormones
Inhibition
Ion channels
Irrigation
Leaves
Lime
Metabolism
Metabolites
Multiplication
Photosynthesis
Physiology
Plant Proteins - genetics
Plant Proteins - metabolism
Plant Roots - genetics
Plant Roots - growth & development
Plant Roots - metabolism
Plant sciences
Plant stress
Plants
Pollen
Polyamines
Polyploidy
Protein Interaction Maps
Proteins
Regulators
Research and Analysis Methods
Respiration
Senescence
Sensors
Signal transduction
Transpiration
title Different adaptation strategies of two citrus scion/rootstock combinations in response to drought stress
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