Climate, Demography, and Zoogeography Predict Introgression Thresholds in Salmonid Hybrid Zones in Rocky Mountain Streams

Among the many threats posed by invasions of nonnative species is introgressive hybridization, which can lead to the genomic extinction of native taxa. This phenomenon is regarded as common and perhaps inevitable among native cutthroat trout and introduced rainbow trout in western North America, des...

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Veröffentlicht in:PloS one 2016-11, Vol.11 (11), p.e0163563-e0163563
Hauptverfasser: Young, Michael K, Isaak, Daniel J, McKelvey, Kevin S, Wilcox, Taylor M, Bingham, Daniel M, Pilgrim, Kristine L, Carim, Kellie J, Campbell, Matthew R, Corsi, Matthew P, Horan, Dona L, Nagel, David E, Schwartz, Michael K
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container_issue 11
container_start_page e0163563
container_title PloS one
container_volume 11
creator Young, Michael K
Isaak, Daniel J
McKelvey, Kevin S
Wilcox, Taylor M
Bingham, Daniel M
Pilgrim, Kristine L
Carim, Kellie J
Campbell, Matthew R
Corsi, Matthew P
Horan, Dona L
Nagel, David E
Schwartz, Michael K
description Among the many threats posed by invasions of nonnative species is introgressive hybridization, which can lead to the genomic extinction of native taxa. This phenomenon is regarded as common and perhaps inevitable among native cutthroat trout and introduced rainbow trout in western North America, despite that these taxa naturally co-occur in some locations. We conducted a synthetic analysis of 13,315 genotyped fish from 558 sites by building logistic regression models using data from geospatial stream databases and from 12 published studies of hybridization to assess whether environmental covariates could explain levels of introgression between westslope cutthroat trout and rainbow trout in the U.S. northern Rocky Mountains. A consensus model performed well (AUC, 0.78-0.86; classification success, 72-82%; 10-fold cross validation, 70-82%) and predicted that rainbow trout introgression was significantly associated with warmer water temperatures, larger streams, proximity to warmer habitats and to recent sources of rainbow trout propagules, presence within the historical range of rainbow trout, and locations further east. Assuming that water temperatures will continue to rise in response to climate change and that levels of introgression outside the historical range of rainbow trout will equilibrate with those inside that range, we applied six scenarios across a 55,234-km stream network that forecast 9.5-74.7% declines in the amount of habitat occupied by westslope cutthroat trout populations of conservation value, but not the wholesale loss of such populations. We conclude that introgression between these taxa is predictably related to environmental conditions, many of which can be manipulated to foster largely genetically intact populations of westslope cutthroat trout and help managers prioritize conservation activities.
doi_str_mv 10.1371/journal.pone.0163563
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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Young, Michael K</au><au>Isaak, Daniel J</au><au>McKelvey, Kevin S</au><au>Wilcox, Taylor M</au><au>Bingham, Daniel M</au><au>Pilgrim, Kristine L</au><au>Carim, Kellie J</au><au>Campbell, Matthew R</au><au>Corsi, Matthew P</au><au>Horan, Dona L</au><au>Nagel, David E</au><au>Schwartz, Michael K</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Climate, Demography, and Zoogeography Predict Introgression Thresholds in Salmonid Hybrid Zones in Rocky Mountain Streams</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2016-11-09</date><risdate>2016</risdate><volume>11</volume><issue>11</issue><spage>e0163563</spage><epage>e0163563</epage><pages>e0163563-e0163563</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Among the many threats posed by invasions of nonnative species is introgressive hybridization, which can lead to the genomic extinction of native taxa. This phenomenon is regarded as common and perhaps inevitable among native cutthroat trout and introduced rainbow trout in western North America, despite that these taxa naturally co-occur in some locations. We conducted a synthetic analysis of 13,315 genotyped fish from 558 sites by building logistic regression models using data from geospatial stream databases and from 12 published studies of hybridization to assess whether environmental covariates could explain levels of introgression between westslope cutthroat trout and rainbow trout in the U.S. northern Rocky Mountains. A consensus model performed well (AUC, 0.78-0.86; classification success, 72-82%; 10-fold cross validation, 70-82%) and predicted that rainbow trout introgression was significantly associated with warmer water temperatures, larger streams, proximity to warmer habitats and to recent sources of rainbow trout propagules, presence within the historical range of rainbow trout, and locations further east. Assuming that water temperatures will continue to rise in response to climate change and that levels of introgression outside the historical range of rainbow trout will equilibrate with those inside that range, we applied six scenarios across a 55,234-km stream network that forecast 9.5-74.7% declines in the amount of habitat occupied by westslope cutthroat trout populations of conservation value, but not the wholesale loss of such populations. We conclude that introgression between these taxa is predictably related to environmental conditions, many of which can be manipulated to foster largely genetically intact populations of westslope cutthroat trout and help managers prioritize conservation activities.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>27828980</pmid><doi>10.1371/journal.pone.0163563</doi><tpages>e0163563</tpages><oa>free_for_read</oa></addata></record>
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identifier ISSN: 1932-6203
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1932-6203
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source Public Library of Science (PLoS) Journals Open Access; MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; Free Full-Text Journals in Chemistry
subjects Analysis
Animals
Biology and Life Sciences
Climate
Climate Change
Conservation
Conservation of Natural Resources - methods
Creeks & streams
Cyprinodon pecosensis
Cyprinodon variegatus
Demography
Earth Sciences
Ecology and Environmental Sciences
Ecosystem
Endangered & extinct species
Environmental conditions
Environmental protection
Extinction
Fish populations
Fish stocking
Fishes
Fishing
Genetics, Population
Genomes
Genomics
Genotype
Geography
Geospatial data
Global temperature changes
Greenhouse effect
Hybrid zones
Hybridization
Hybridization, Genetic
Idaho
Invasive species
Logistic Models
Montana
Mountain streams
Mountains
Nonnative species
Oncorhynchus - classification
Oncorhynchus - genetics
Oncorhynchus - physiology
Oncorhynchus clarkii
Oncorhynchus clarkii clarkii
Oncorhynchus clarkii lewisi
Oncorhynchus mykiss
Oncorhynchus mykiss - genetics
Oncorhynchus mykiss - physiology
Population genetics
Populations
Propagules
Protection and preservation
Regression analysis
Regression models
Rivers
Salmonidae
Salvelinus confluentus
Salvelinus fontinalis
Species extinction
Streams
Taxa
Trout
Water temperature
title Climate, Demography, and Zoogeography Predict Introgression Thresholds in Salmonid Hybrid Zones in Rocky Mountain Streams
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