Feasibility of MR-Based Body Composition Analysis in Large Scale Population Studies

Quantitative and accurate measurements of fat and muscle in the body are important for prevention and diagnosis of diseases related to obesity and muscle degeneration. Manually segmenting muscle and fat compartments in MR body-images is laborious and time-consuming, hindering implementation in large...

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Veröffentlicht in:PloS one 2016-09, Vol.11 (9), p.e0163332-e0163332
Hauptverfasser: West, Janne, Dahlqvist Leinhard, Olof, Romu, Thobias, Collins, Rory, Garratt, Steve, Bell, Jimmy D, Borga, Magnus, Thomas, Louise
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container_issue 9
container_start_page e0163332
container_title PloS one
container_volume 11
creator West, Janne
Dahlqvist Leinhard, Olof
Romu, Thobias
Collins, Rory
Garratt, Steve
Bell, Jimmy D
Borga, Magnus
Thomas, Louise
description Quantitative and accurate measurements of fat and muscle in the body are important for prevention and diagnosis of diseases related to obesity and muscle degeneration. Manually segmenting muscle and fat compartments in MR body-images is laborious and time-consuming, hindering implementation in large cohorts. In the present study, the feasibility and success-rate of a Dixon-based MR scan followed by an intensity-normalised, non-rigid, multi-atlas based segmentation was investigated in a cohort of 3,000 subjects. 3,000 participants in the in-depth phenotyping arm of the UK Biobank imaging study underwent a comprehensive MR examination. All subjects were scanned using a 1.5 T MR-scanner with the dual-echo Dixon Vibe protocol, covering neck to knees. Subjects were scanned with six slabs in supine position, without localizer. Automated body composition analysis was performed using the AMRA Profiler™ system, to segment and quantify visceral adipose tissue (VAT), abdominal subcutaneous adipose tissue (ASAT) and thigh muscles. Technical quality assurance was performed and a standard set of acceptance/rejection criteria was established. Descriptive statistics were calculated for all volume measurements and quality assurance metrics. Of the 3,000 subjects, 2,995 (99.83%) were analysable for body fat, 2,828 (94.27%) were analysable when body fat and one thigh was included, and 2,775 (92.50%) were fully analysable for body fat and both thigh muscles. Reasons for not being able to analyse datasets were mainly due to missing slabs in the acquisition, or patient positioned so that large parts of the volume was outside of the field-of-view. In conclusion, this study showed that the rapid UK Biobank MR-protocol was well tolerated by most subjects and sufficiently robust to achieve very high success-rate for body composition analysis. This research has been conducted using the UK Biobank Resource.
doi_str_mv 10.1371/journal.pone.0163332
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Manually segmenting muscle and fat compartments in MR body-images is laborious and time-consuming, hindering implementation in large cohorts. In the present study, the feasibility and success-rate of a Dixon-based MR scan followed by an intensity-normalised, non-rigid, multi-atlas based segmentation was investigated in a cohort of 3,000 subjects. 3,000 participants in the in-depth phenotyping arm of the UK Biobank imaging study underwent a comprehensive MR examination. All subjects were scanned using a 1.5 T MR-scanner with the dual-echo Dixon Vibe protocol, covering neck to knees. Subjects were scanned with six slabs in supine position, without localizer. Automated body composition analysis was performed using the AMRA Profiler™ system, to segment and quantify visceral adipose tissue (VAT), abdominal subcutaneous adipose tissue (ASAT) and thigh muscles. Technical quality assurance was performed and a standard set of acceptance/rejection criteria was established. 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Manually segmenting muscle and fat compartments in MR body-images is laborious and time-consuming, hindering implementation in large cohorts. In the present study, the feasibility and success-rate of a Dixon-based MR scan followed by an intensity-normalised, non-rigid, multi-atlas based segmentation was investigated in a cohort of 3,000 subjects. 3,000 participants in the in-depth phenotyping arm of the UK Biobank imaging study underwent a comprehensive MR examination. All subjects were scanned using a 1.5 T MR-scanner with the dual-echo Dixon Vibe protocol, covering neck to knees. Subjects were scanned with six slabs in supine position, without localizer. Automated body composition analysis was performed using the AMRA Profiler™ system, to segment and quantify visceral adipose tissue (VAT), abdominal subcutaneous adipose tissue (ASAT) and thigh muscles. Technical quality assurance was performed and a standard set of acceptance/rejection criteria was established. 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subjects Abdomen
Acceptance criteria
Adipose tissue
Automation
Biology and Life Sciences
Biomedical engineering
Body composition
Body Composition Analysis
Body fat
Degeneration
Dixon protocol
Engineering and Technology
Feasibility studies
Health sciences
Image processing
Image segmentation
International conferences
Knee
Life sciences
Magnetic Resonance
Medicine and Health Sciences
Muscles
Musculoskeletal system
Neck
NMR
Nuclear magnetic resonance
Obesity
Phenotyping
Physiological aspects
Population
Population studies
Population Study
Quality assurance
Quality Control
Quality of life
Quantitative MRI
Research and Analysis Methods
Sarcopenia
Slabs
Statistical analysis
Supine position
Thigh
title Feasibility of MR-Based Body Composition Analysis in Large Scale Population Studies
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