Association of MicroRNAs with Antibody Response to Mycoplasma bovis in Beef Cattle
The objective of this study was to identify microRNAs associated with a serum antibody response to Mycoplasma bovis in beef cattle. Serum from sixteen beef calves was collected at three points: in summer after calves were born, in fall at weaning, and in the following spring. All sera collected in t...
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description | The objective of this study was to identify microRNAs associated with a serum antibody response to Mycoplasma bovis in beef cattle. Serum from sixteen beef calves was collected at three points: in summer after calves were born, in fall at weaning, and in the following spring. All sera collected in the summer were ELISA-negative for anti-M. bovis. By the fall, eight animals were seropositive for IgG (positive group), while eight remained negative (negative group). By spring, all animals in both groups were seropositive. MicroRNAs were extracted from sera and sequenced on the Illumina HiSeq next-generation sequencer. A total of 1,374,697 sequences mapped to microRNAs in the bovine genome. Of these, 82% of the sequences corresponded to 27 microRNAs, each represented by a minimum of 10,000 sequences. There was a statistically significant interaction between ELISA response and season for bta-miR-24-3p (P = 0.0268). All sera collected at the initial summer had a similar number of copies of this microRNA (P = 0.773). In the fall, the positive group had an increased number of copies when compared to the negative group (P = 0.021), and this grew more significant by the following spring (P = 0.0001). There were 21 microRNAs associated (P< 0.05) with season. These microRNAs could be evaluated further as candidates to potentially improve productivity in cattle. The microRNAs bta-let-7b, bta-miR- 24-3p, bta-miR- 92a, and bta-miR-423-5p, were significatly associated with ELISA status (P< 0.05). These microRNAs have been recognized as playing a role in the host defense against bacteria in humans, mice, and dairy cattle. Further studies are needed to establish if these microRNAs could be used as diagnostic marker or indicator of exposure, or whether intervention strategies could be developed as an alternative to antibiotics for controlling disease due to M. bovis. |
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Serum from sixteen beef calves was collected at three points: in summer after calves were born, in fall at weaning, and in the following spring. All sera collected in the summer were ELISA-negative for anti-M. bovis. By the fall, eight animals were seropositive for IgG (positive group), while eight remained negative (negative group). By spring, all animals in both groups were seropositive. MicroRNAs were extracted from sera and sequenced on the Illumina HiSeq next-generation sequencer. A total of 1,374,697 sequences mapped to microRNAs in the bovine genome. Of these, 82% of the sequences corresponded to 27 microRNAs, each represented by a minimum of 10,000 sequences. There was a statistically significant interaction between ELISA response and season for bta-miR-24-3p (P = 0.0268). All sera collected at the initial summer had a similar number of copies of this microRNA (P = 0.773). In the fall, the positive group had an increased number of copies when compared to the negative group (P = 0.021), and this grew more significant by the following spring (P = 0.0001). There were 21 microRNAs associated (P< 0.05) with season. These microRNAs could be evaluated further as candidates to potentially improve productivity in cattle. The microRNAs bta-let-7b, bta-miR- 24-3p, bta-miR- 92a, and bta-miR-423-5p, were significatly associated with ELISA status (P< 0.05). These microRNAs have been recognized as playing a role in the host defense against bacteria in humans, mice, and dairy cattle. Further studies are needed to establish if these microRNAs could be used as diagnostic marker or indicator of exposure, or whether intervention strategies could be developed as an alternative to antibiotics for controlling disease due to M. bovis.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0161651</identifier><identifier>PMID: 27537842</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Analysis ; Animal diseases ; Animals ; Antibiotics ; Antibodies, Bacterial - immunology ; Antibody Formation - physiology ; Antibody response ; Antigens ; Bacteria ; Bacterial infections ; Beef ; Beef cattle ; Biology and life sciences ; Biomarkers ; Bovidae ; Calves ; Care and treatment ; Cattle ; Cattle Diseases - immunology ; Cattle Diseases - microbiology ; Cattle industry ; Dairy cattle ; Diagnosis ; Diagnostic systems ; Disease control ; Diseases ; DNA methylation ; Enzyme-linked immunosorbent assay ; Enzyme-Linked Immunosorbent Assay - veterinary ; Gene Library ; Gene sequencing ; Genomes ; Immunoglobulin G ; Male ; Medicine and Health Sciences ; MicroRNA ; MicroRNAs ; MicroRNAs - physiology ; miRNA ; Mycoplasma ; Mycoplasma bovis ; Mycoplasma bovis - immunology ; Mycoplasma diseases in animals ; Mycoplasma Infections - immunology ; Mycoplasma Infections - veterinary ; Pathogens ; Research and Analysis Methods ; Respiratory diseases ; Ribonucleic acid ; RNA ; Statistical analysis ; Summer ; Weaning</subject><ispartof>PloS one, 2016-08, Vol.11 (8), p.e0161651-e0161651</ispartof><rights>COPYRIGHT 2016 Public Library of Science</rights><rights>This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication: https://creativecommons.org/publicdomain/zero/1.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c725t-50185467205aea2b66aff349b1bbb7f8d17a6d86f3a0ba9139458bf04b4226243</citedby><cites>FETCH-LOGICAL-c725t-50185467205aea2b66aff349b1bbb7f8d17a6d86f3a0ba9139458bf04b4226243</cites><orcidid>0000-0003-3773-4035</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4990326/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4990326/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2100,2926,23865,27923,27924,53790,53792,79371,79372</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27537842$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Calin, George</contributor><creatorcontrib>Casas, Eduardo</creatorcontrib><creatorcontrib>Cai, Guohong</creatorcontrib><creatorcontrib>Kuehn, Larry A</creatorcontrib><creatorcontrib>Register, Karen B</creatorcontrib><creatorcontrib>McDaneld, Tara G</creatorcontrib><creatorcontrib>Neill, John D</creatorcontrib><title>Association of MicroRNAs with Antibody Response to Mycoplasma bovis in Beef Cattle</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>The objective of this study was to identify microRNAs associated with a serum antibody response to Mycoplasma bovis in beef cattle. Serum from sixteen beef calves was collected at three points: in summer after calves were born, in fall at weaning, and in the following spring. All sera collected in the summer were ELISA-negative for anti-M. bovis. By the fall, eight animals were seropositive for IgG (positive group), while eight remained negative (negative group). By spring, all animals in both groups were seropositive. MicroRNAs were extracted from sera and sequenced on the Illumina HiSeq next-generation sequencer. A total of 1,374,697 sequences mapped to microRNAs in the bovine genome. Of these, 82% of the sequences corresponded to 27 microRNAs, each represented by a minimum of 10,000 sequences. There was a statistically significant interaction between ELISA response and season for bta-miR-24-3p (P = 0.0268). All sera collected at the initial summer had a similar number of copies of this microRNA (P = 0.773). In the fall, the positive group had an increased number of copies when compared to the negative group (P = 0.021), and this grew more significant by the following spring (P = 0.0001). There were 21 microRNAs associated (P< 0.05) with season. These microRNAs could be evaluated further as candidates to potentially improve productivity in cattle. The microRNAs bta-let-7b, bta-miR- 24-3p, bta-miR- 92a, and bta-miR-423-5p, were significatly associated with ELISA status (P< 0.05). These microRNAs have been recognized as playing a role in the host defense against bacteria in humans, mice, and dairy cattle. Further studies are needed to establish if these microRNAs could be used as diagnostic marker or indicator of exposure, or whether intervention strategies could be developed as an alternative to antibiotics for controlling disease due to M. bovis.</description><subject>Analysis</subject><subject>Animal diseases</subject><subject>Animals</subject><subject>Antibiotics</subject><subject>Antibodies, Bacterial - immunology</subject><subject>Antibody Formation - physiology</subject><subject>Antibody response</subject><subject>Antigens</subject><subject>Bacteria</subject><subject>Bacterial infections</subject><subject>Beef</subject><subject>Beef cattle</subject><subject>Biology and life sciences</subject><subject>Biomarkers</subject><subject>Bovidae</subject><subject>Calves</subject><subject>Care and treatment</subject><subject>Cattle</subject><subject>Cattle Diseases - immunology</subject><subject>Cattle Diseases - microbiology</subject><subject>Cattle industry</subject><subject>Dairy cattle</subject><subject>Diagnosis</subject><subject>Diagnostic systems</subject><subject>Disease control</subject><subject>Diseases</subject><subject>DNA methylation</subject><subject>Enzyme-linked immunosorbent assay</subject><subject>Enzyme-Linked Immunosorbent Assay - veterinary</subject><subject>Gene Library</subject><subject>Gene sequencing</subject><subject>Genomes</subject><subject>Immunoglobulin G</subject><subject>Male</subject><subject>Medicine and Health Sciences</subject><subject>MicroRNA</subject><subject>MicroRNAs</subject><subject>MicroRNAs - physiology</subject><subject>miRNA</subject><subject>Mycoplasma</subject><subject>Mycoplasma bovis</subject><subject>Mycoplasma bovis - immunology</subject><subject>Mycoplasma diseases in animals</subject><subject>Mycoplasma Infections - immunology</subject><subject>Mycoplasma Infections - veterinary</subject><subject>Pathogens</subject><subject>Research and Analysis Methods</subject><subject>Respiratory diseases</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>Statistical analysis</subject><subject>Summer</subject><subject>Weaning</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>DOA</sourceid><recordid>eNqNk99v0zAQxyMEYmPwHyCIhITgocW_47wghYoflTYmlR-v1iWxW1dp3MXOoP897ppNDdrD5Adb589973y-S5KXGE0xzfCHteu7Fprp1rV6irDAguNHySnOKZkIgujjo_NJ8sz7NUKcSiGeJick4zSTjJwmi8J7V1kI1rWpM-mFrTq3-F749I8Nq7Rogy1dvUsX2sdAXqfBpRe7ym0b8BtIS3dtfWrb9JPWJp1BCI1-njwx0Hj9YtjPkl9fPv-cfZucX36dz4rzSZURHiYcYcmZyAjioIGUQoAxlOUlLssyM7LGGYhaCkMBlZBjmjMuS4NYyQgRhNGz5PVBd9s4r4ZyeIUlJpJQJmkk5geidrBW285uoNspB1bdGFy3VNAFWzVaQdTXUtYVrnMmRMzBYJxz4JRn-8yi1schWl9udF3pNnTQjETHN61dqaW7VizPESUiCrwbBDp31Wsf1Mb6SjcNtNr1N3lzkXMq6ENQIqVEOIvom__Q-wsxUEuIb7WtcTHFai-qCiYwokzQPFLTe6i4ar2xVWwzY6N95PB-5BCZoP-GJfTeq_mPxcPZy99j9u0Ru9LQhJV3Tb9vUj8G2QGMTet9p83df2Ck9lNyWw21nxI1TEl0e3X8l3dOt2NB_wF5uwoi</recordid><startdate>20160818</startdate><enddate>20160818</enddate><creator>Casas, Eduardo</creator><creator>Cai, Guohong</creator><creator>Kuehn, Larry A</creator><creator>Register, Karen B</creator><creator>McDaneld, Tara G</creator><creator>Neill, John D</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-3773-4035</orcidid></search><sort><creationdate>20160818</creationdate><title>Association of MicroRNAs with Antibody Response to Mycoplasma bovis in Beef Cattle</title><author>Casas, Eduardo ; Cai, Guohong ; Kuehn, Larry A ; Register, Karen B ; McDaneld, Tara G ; Neill, John D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c725t-50185467205aea2b66aff349b1bbb7f8d17a6d86f3a0ba9139458bf04b4226243</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Analysis</topic><topic>Animal diseases</topic><topic>Animals</topic><topic>Antibiotics</topic><topic>Antibodies, Bacterial - immunology</topic><topic>Antibody Formation - physiology</topic><topic>Antibody response</topic><topic>Antigens</topic><topic>Bacteria</topic><topic>Bacterial infections</topic><topic>Beef</topic><topic>Beef cattle</topic><topic>Biology and life sciences</topic><topic>Biomarkers</topic><topic>Bovidae</topic><topic>Calves</topic><topic>Care and treatment</topic><topic>Cattle</topic><topic>Cattle Diseases - immunology</topic><topic>Cattle Diseases - microbiology</topic><topic>Cattle industry</topic><topic>Dairy cattle</topic><topic>Diagnosis</topic><topic>Diagnostic systems</topic><topic>Disease control</topic><topic>Diseases</topic><topic>DNA methylation</topic><topic>Enzyme-linked immunosorbent assay</topic><topic>Enzyme-Linked Immunosorbent Assay - veterinary</topic><topic>Gene Library</topic><topic>Gene sequencing</topic><topic>Genomes</topic><topic>Immunoglobulin G</topic><topic>Male</topic><topic>Medicine and Health Sciences</topic><topic>MicroRNA</topic><topic>MicroRNAs</topic><topic>MicroRNAs - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Casas, Eduardo</au><au>Cai, Guohong</au><au>Kuehn, Larry A</au><au>Register, Karen B</au><au>McDaneld, Tara G</au><au>Neill, John D</au><au>Calin, George</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Association of MicroRNAs with Antibody Response to Mycoplasma bovis in Beef Cattle</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2016-08-18</date><risdate>2016</risdate><volume>11</volume><issue>8</issue><spage>e0161651</spage><epage>e0161651</epage><pages>e0161651-e0161651</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>The objective of this study was to identify microRNAs associated with a serum antibody response to Mycoplasma bovis in beef cattle. Serum from sixteen beef calves was collected at three points: in summer after calves were born, in fall at weaning, and in the following spring. All sera collected in the summer were ELISA-negative for anti-M. bovis. By the fall, eight animals were seropositive for IgG (positive group), while eight remained negative (negative group). By spring, all animals in both groups were seropositive. MicroRNAs were extracted from sera and sequenced on the Illumina HiSeq next-generation sequencer. A total of 1,374,697 sequences mapped to microRNAs in the bovine genome. Of these, 82% of the sequences corresponded to 27 microRNAs, each represented by a minimum of 10,000 sequences. There was a statistically significant interaction between ELISA response and season for bta-miR-24-3p (P = 0.0268). All sera collected at the initial summer had a similar number of copies of this microRNA (P = 0.773). In the fall, the positive group had an increased number of copies when compared to the negative group (P = 0.021), and this grew more significant by the following spring (P = 0.0001). There were 21 microRNAs associated (P< 0.05) with season. These microRNAs could be evaluated further as candidates to potentially improve productivity in cattle. The microRNAs bta-let-7b, bta-miR- 24-3p, bta-miR- 92a, and bta-miR-423-5p, were significatly associated with ELISA status (P< 0.05). These microRNAs have been recognized as playing a role in the host defense against bacteria in humans, mice, and dairy cattle. Further studies are needed to establish if these microRNAs could be used as diagnostic marker or indicator of exposure, or whether intervention strategies could be developed as an alternative to antibiotics for controlling disease due to M. bovis.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>27537842</pmid><doi>10.1371/journal.pone.0161651</doi><tpages>e0161651</tpages><orcidid>https://orcid.org/0000-0003-3773-4035</orcidid><oa>free_for_read</oa></addata></record> |
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recordid | cdi_plos_journals_1812823483 |
source | MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Public Library of Science (PLoS); PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Analysis Animal diseases Animals Antibiotics Antibodies, Bacterial - immunology Antibody Formation - physiology Antibody response Antigens Bacteria Bacterial infections Beef Beef cattle Biology and life sciences Biomarkers Bovidae Calves Care and treatment Cattle Cattle Diseases - immunology Cattle Diseases - microbiology Cattle industry Dairy cattle Diagnosis Diagnostic systems Disease control Diseases DNA methylation Enzyme-linked immunosorbent assay Enzyme-Linked Immunosorbent Assay - veterinary Gene Library Gene sequencing Genomes Immunoglobulin G Male Medicine and Health Sciences MicroRNA MicroRNAs MicroRNAs - physiology miRNA Mycoplasma Mycoplasma bovis Mycoplasma bovis - immunology Mycoplasma diseases in animals Mycoplasma Infections - immunology Mycoplasma Infections - veterinary Pathogens Research and Analysis Methods Respiratory diseases Ribonucleic acid RNA Statistical analysis Summer Weaning |
title | Association of MicroRNAs with Antibody Response to Mycoplasma bovis in Beef Cattle |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-11T15%3A42%3A19IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Association%20of%20MicroRNAs%20with%20Antibody%20Response%20to%20Mycoplasma%20bovis%20in%20Beef%20Cattle&rft.jtitle=PloS%20one&rft.au=Casas,%20Eduardo&rft.date=2016-08-18&rft.volume=11&rft.issue=8&rft.spage=e0161651&rft.epage=e0161651&rft.pages=e0161651-e0161651&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0161651&rft_dat=%3Cgale_plos_%3EA461034639%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1812823483&rft_id=info:pmid/27537842&rft_galeid=A461034639&rft_doaj_id=oai_doaj_org_article_a139e88dc1d94661bbf1195a535766af&rfr_iscdi=true |