Alarm Variables for Dengue Outbreaks: A Multi-Centre Study in Asia and Latin America
Worldwide, dengue is an unrelenting economic and health burden. Dengue outbreaks have become increasingly common, which place great strain on health infrastructure and services. Early warning models could allow health systems and vector control programmes to respond more cost-effectively and efficie...
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creator | Bowman, Leigh R Tejeda, Gustavo S Coelho, Giovanini E Sulaiman, Lokman H Gill, Balvinder S McCall, Philip J Olliaro, Piero L Ranzinger, Silvia R Quang, Luong C Ramm, Ronald S Kroeger, Axel Petzold, Max G |
description | Worldwide, dengue is an unrelenting economic and health burden. Dengue outbreaks have become increasingly common, which place great strain on health infrastructure and services. Early warning models could allow health systems and vector control programmes to respond more cost-effectively and efficiently.
The Shewhart method and Endemic Channel were used to identify alarm variables that may predict dengue outbreaks. Five country datasets were compiled by epidemiological week over the years 2007-2013. These data were split between the years 2007-2011 (historic period) and 2012-2013 (evaluation period). Associations between alarm/ outbreak variables were analysed using logistic regression during the historic period while alarm and outbreak signals were captured during the evaluation period. These signals were combined to form alarm/ outbreak periods, where 2 signals were equal to 1 period. Alarm periods were quantified and used to predict subsequent outbreak periods. Across Mexico and Dominican Republic, an increase in probable cases predicted outbreaks of hospitalised cases with sensitivities and positive predictive values (PPV) of 93%/ 83% and 97%/ 86% respectively, at a lag of 1-12 weeks. An increase in mean temperature ably predicted outbreaks of hospitalised cases in Mexico and Brazil, with sensitivities and PPVs of 79%/ 73% and 81%/ 46% respectively, also at a lag of 1-12 weeks. Mean age was predictive of hospitalised cases at sensitivities and PPVs of 72%/ 74% and 96%/ 45% in Mexico and Malaysia respectively, at a lag of 4-16 weeks.
An increase in probable cases was predictive of outbreaks, while meteorological variables, particularly mean temperature, demonstrated predictive potential in some countries, but not all. While it is difficult to define uniform variables applicable in every country context, the use of probable cases and meteorological variables in tailored early warning systems could be used to highlight the occurrence of dengue outbreaks or indicate increased risk of dengue transmission. |
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The Shewhart method and Endemic Channel were used to identify alarm variables that may predict dengue outbreaks. Five country datasets were compiled by epidemiological week over the years 2007-2013. These data were split between the years 2007-2011 (historic period) and 2012-2013 (evaluation period). Associations between alarm/ outbreak variables were analysed using logistic regression during the historic period while alarm and outbreak signals were captured during the evaluation period. These signals were combined to form alarm/ outbreak periods, where 2 signals were equal to 1 period. Alarm periods were quantified and used to predict subsequent outbreak periods. Across Mexico and Dominican Republic, an increase in probable cases predicted outbreaks of hospitalised cases with sensitivities and positive predictive values (PPV) of 93%/ 83% and 97%/ 86% respectively, at a lag of 1-12 weeks. An increase in mean temperature ably predicted outbreaks of hospitalised cases in Mexico and Brazil, with sensitivities and PPVs of 79%/ 73% and 81%/ 46% respectively, also at a lag of 1-12 weeks. Mean age was predictive of hospitalised cases at sensitivities and PPVs of 72%/ 74% and 96%/ 45% in Mexico and Malaysia respectively, at a lag of 4-16 weeks.
An increase in probable cases was predictive of outbreaks, while meteorological variables, particularly mean temperature, demonstrated predictive potential in some countries, but not all. While it is difficult to define uniform variables applicable in every country context, the use of probable cases and meteorological variables in tailored early warning systems could be used to highlight the occurrence of dengue outbreaks or indicate increased risk of dengue transmission.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0157971</identifier><identifier>PMID: 27348752</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Aedes aegypti ; Alarm systems ; Asia ; Biology and Life Sciences ; climate ; Dengue ; Dengue - epidemiology ; Dengue fever ; Diagnosis ; Disease Outbreaks ; Disease transmission ; Distribution ; Early warning systems ; Earth Sciences ; Epidemics ; Epidemiology ; Evaluation ; Folkhälsovetenskap, global hälsa och socialmedicin ; Health ; Hospitalization - statistics & numerical data ; human movement ; Humans ; Latin America ; Mean temperatures ; Models, Statistical ; Outbreaks ; People and places ; Physical Sciences ; Public Health, Global Health and Social Medicine ; puerto-rico ; query data ; Regression analysis ; Research and Analysis Methods ; Seasons ; surveillance ; System effectiveness ; Systematic review ; Temperature ; transmission dynamics ; Tropical diseases ; Vector-borne diseases ; virus transmission ; Warning systems</subject><ispartof>PloS one, 2016-06, Vol.11 (6), p.e0157971-e0157971</ispartof><rights>COPYRIGHT 2016 Public Library of Science</rights><rights>2016 Bowman et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2016 Bowman et al 2016 Bowman et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c763t-a7051371b4b863cd3229f3493729e5c6dfd9db76b253e088c6b40282b332781e3</citedby><cites>FETCH-LOGICAL-c763t-a7051371b4b863cd3229f3493729e5c6dfd9db76b253e088c6b40282b332781e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4922573/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4922573/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79343,79344</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27348752$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://gup.ub.gu.se/publication/239468$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><contributor>Hsieh, Ying-Hen</contributor><creatorcontrib>Bowman, Leigh R</creatorcontrib><creatorcontrib>Tejeda, Gustavo S</creatorcontrib><creatorcontrib>Coelho, Giovanini E</creatorcontrib><creatorcontrib>Sulaiman, Lokman H</creatorcontrib><creatorcontrib>Gill, Balvinder S</creatorcontrib><creatorcontrib>McCall, Philip J</creatorcontrib><creatorcontrib>Olliaro, Piero L</creatorcontrib><creatorcontrib>Ranzinger, Silvia R</creatorcontrib><creatorcontrib>Quang, Luong C</creatorcontrib><creatorcontrib>Ramm, Ronald S</creatorcontrib><creatorcontrib>Kroeger, Axel</creatorcontrib><creatorcontrib>Petzold, Max G</creatorcontrib><title>Alarm Variables for Dengue Outbreaks: A Multi-Centre Study in Asia and Latin America</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Worldwide, dengue is an unrelenting economic and health burden. Dengue outbreaks have become increasingly common, which place great strain on health infrastructure and services. Early warning models could allow health systems and vector control programmes to respond more cost-effectively and efficiently.
The Shewhart method and Endemic Channel were used to identify alarm variables that may predict dengue outbreaks. Five country datasets were compiled by epidemiological week over the years 2007-2013. These data were split between the years 2007-2011 (historic period) and 2012-2013 (evaluation period). Associations between alarm/ outbreak variables were analysed using logistic regression during the historic period while alarm and outbreak signals were captured during the evaluation period. These signals were combined to form alarm/ outbreak periods, where 2 signals were equal to 1 period. Alarm periods were quantified and used to predict subsequent outbreak periods. Across Mexico and Dominican Republic, an increase in probable cases predicted outbreaks of hospitalised cases with sensitivities and positive predictive values (PPV) of 93%/ 83% and 97%/ 86% respectively, at a lag of 1-12 weeks. An increase in mean temperature ably predicted outbreaks of hospitalised cases in Mexico and Brazil, with sensitivities and PPVs of 79%/ 73% and 81%/ 46% respectively, also at a lag of 1-12 weeks. Mean age was predictive of hospitalised cases at sensitivities and PPVs of 72%/ 74% and 96%/ 45% in Mexico and Malaysia respectively, at a lag of 4-16 weeks.
An increase in probable cases was predictive of outbreaks, while meteorological variables, particularly mean temperature, demonstrated predictive potential in some countries, but not all. While it is difficult to define uniform variables applicable in every country context, the use of probable cases and meteorological variables in tailored early warning systems could be used to highlight the occurrence of dengue outbreaks or indicate increased risk of dengue transmission.</description><subject>Aedes aegypti</subject><subject>Alarm systems</subject><subject>Asia</subject><subject>Biology and Life Sciences</subject><subject>climate</subject><subject>Dengue</subject><subject>Dengue - epidemiology</subject><subject>Dengue fever</subject><subject>Diagnosis</subject><subject>Disease Outbreaks</subject><subject>Disease transmission</subject><subject>Distribution</subject><subject>Early warning systems</subject><subject>Earth Sciences</subject><subject>Epidemics</subject><subject>Epidemiology</subject><subject>Evaluation</subject><subject>Folkhälsovetenskap, global hälsa och socialmedicin</subject><subject>Health</subject><subject>Hospitalization - statistics & numerical data</subject><subject>human movement</subject><subject>Humans</subject><subject>Latin America</subject><subject>Mean temperatures</subject><subject>Models, Statistical</subject><subject>Outbreaks</subject><subject>People and places</subject><subject>Physical Sciences</subject><subject>Public Health, Global Health and Social Medicine</subject><subject>puerto-rico</subject><subject>query data</subject><subject>Regression analysis</subject><subject>Research and Analysis Methods</subject><subject>Seasons</subject><subject>surveillance</subject><subject>System effectiveness</subject><subject>Systematic review</subject><subject>Temperature</subject><subject>transmission dynamics</subject><subject>Tropical diseases</subject><subject>Vector-borne diseases</subject><subject>virus transmission</subject><subject>Warning 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Variables for Dengue Outbreaks: A Multi-Centre Study in Asia and Latin America</title><author>Bowman, Leigh R ; Tejeda, Gustavo S ; Coelho, Giovanini E ; Sulaiman, Lokman H ; Gill, Balvinder S ; McCall, Philip J ; Olliaro, Piero L ; Ranzinger, Silvia R ; Quang, Luong C ; Ramm, Ronald S ; Kroeger, Axel ; Petzold, Max G</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c763t-a7051371b4b863cd3229f3493729e5c6dfd9db76b253e088c6b40282b332781e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Aedes aegypti</topic><topic>Alarm systems</topic><topic>Asia</topic><topic>Biology and Life Sciences</topic><topic>climate</topic><topic>Dengue</topic><topic>Dengue - epidemiology</topic><topic>Dengue fever</topic><topic>Diagnosis</topic><topic>Disease Outbreaks</topic><topic>Disease transmission</topic><topic>Distribution</topic><topic>Early warning systems</topic><topic>Earth 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R</au><au>Tejeda, Gustavo S</au><au>Coelho, Giovanini E</au><au>Sulaiman, Lokman H</au><au>Gill, Balvinder S</au><au>McCall, Philip J</au><au>Olliaro, Piero L</au><au>Ranzinger, Silvia R</au><au>Quang, Luong C</au><au>Ramm, Ronald S</au><au>Kroeger, Axel</au><au>Petzold, Max G</au><au>Hsieh, Ying-Hen</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Alarm Variables for Dengue Outbreaks: A Multi-Centre Study in Asia and Latin America</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2016-06-27</date><risdate>2016</risdate><volume>11</volume><issue>6</issue><spage>e0157971</spage><epage>e0157971</epage><pages>e0157971-e0157971</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Worldwide, dengue is an unrelenting economic and health burden. Dengue outbreaks have become increasingly common, which place great strain on health infrastructure and services. Early warning models could allow health systems and vector control programmes to respond more cost-effectively and efficiently.
The Shewhart method and Endemic Channel were used to identify alarm variables that may predict dengue outbreaks. Five country datasets were compiled by epidemiological week over the years 2007-2013. These data were split between the years 2007-2011 (historic period) and 2012-2013 (evaluation period). Associations between alarm/ outbreak variables were analysed using logistic regression during the historic period while alarm and outbreak signals were captured during the evaluation period. These signals were combined to form alarm/ outbreak periods, where 2 signals were equal to 1 period. Alarm periods were quantified and used to predict subsequent outbreak periods. Across Mexico and Dominican Republic, an increase in probable cases predicted outbreaks of hospitalised cases with sensitivities and positive predictive values (PPV) of 93%/ 83% and 97%/ 86% respectively, at a lag of 1-12 weeks. An increase in mean temperature ably predicted outbreaks of hospitalised cases in Mexico and Brazil, with sensitivities and PPVs of 79%/ 73% and 81%/ 46% respectively, also at a lag of 1-12 weeks. Mean age was predictive of hospitalised cases at sensitivities and PPVs of 72%/ 74% and 96%/ 45% in Mexico and Malaysia respectively, at a lag of 4-16 weeks.
An increase in probable cases was predictive of outbreaks, while meteorological variables, particularly mean temperature, demonstrated predictive potential in some countries, but not all. While it is difficult to define uniform variables applicable in every country context, the use of probable cases and meteorological variables in tailored early warning systems could be used to highlight the occurrence of dengue outbreaks or indicate increased risk of dengue transmission.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>27348752</pmid><doi>10.1371/journal.pone.0157971</doi><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1932-6203 |
ispartof | PloS one, 2016-06, Vol.11 (6), p.e0157971-e0157971 |
issn | 1932-6203 1932-6203 |
language | eng |
recordid | cdi_plos_journals_1799851627 |
source | Public Library of Science (PLoS) Journals Open Access; MEDLINE; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Aedes aegypti Alarm systems Asia Biology and Life Sciences climate Dengue Dengue - epidemiology Dengue fever Diagnosis Disease Outbreaks Disease transmission Distribution Early warning systems Earth Sciences Epidemics Epidemiology Evaluation Folkhälsovetenskap, global hälsa och socialmedicin Health Hospitalization - statistics & numerical data human movement Humans Latin America Mean temperatures Models, Statistical Outbreaks People and places Physical Sciences Public Health, Global Health and Social Medicine puerto-rico query data Regression analysis Research and Analysis Methods Seasons surveillance System effectiveness Systematic review Temperature transmission dynamics Tropical diseases Vector-borne diseases virus transmission Warning systems |
title | Alarm Variables for Dengue Outbreaks: A Multi-Centre Study in Asia and Latin America |
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