Comprehensive Annotation of the Parastagonospora nodorum Reference Genome Using Next-Generation Genomics, Transcriptomics and Proteogenomics

Parastagonospora nodorum, the causal agent of Septoria nodorum blotch (SNB), is an economically important pathogen of wheat (Triticum spp.), and a model for the study of necrotrophic pathology and genome evolution. The reference P. nodorum strain SN15 was the first Dothideomycete with a published ge...

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Veröffentlicht in:	PloS one 2016-02, Vol.11 (2), p.e0147221-e0147221
Hauptverfasser:	Syme, Robert A, Tan, Kar-Chun, Hane, James K, Dodhia, Kejal, Stoll, Thomas, Hastie, Marcus, Furuki, Eiko, Ellwood, Simon R, Williams, Angela H, Tan, Yew-Foon, Testa, Alison C, Gorman, Jeffrey J, Oliver, Richard P
Format:	Artikel
Sprache:	eng
Schlagworte:	Acids Amino acid sequence Analysis Annotations Ascomycota - genetics Ascomycota - metabolism Assembly Bioinformatics Biology and Life Sciences Blotch Computational Biology - methods Crop diseases DNA sequencing Economic models Experimental methods Gene Expression Profiling - methods Genes Genome, Fungal Genomes Genomics Genomics - methods High-Throughput Nucleotide Sequencing Leptosphaeria Medical research Metabolism Metabolites Molecular Sequence Annotation Nucleotide sequence Open source software Parastagonospora nodorum Proteins Proteome Proteomics Proteomics - methods R&D Research & development Research and analysis methods Signal transduction Single-nucleotide polymorphism Transcriptome Triticum Wheat
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