Mitochondrial mutations in subjects with psychiatric disorders
A considerable body of evidence supports the role of mitochondrial dysfunction in psychiatric disorders and mitochondrial DNA (mtDNA) mutations are known to alter brain energy metabolism, neurotransmission, and cause neurodegenerative disorders. Genetic studies focusing on common nuclear genome vari...
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creator | Sequeira, Adolfo Rollins, Brandi Magnan, Christophe van Oven, Mannis Baldi, Pierre Myers, Richard M Barchas, Jack D Schatzberg, Alan F Watson, Stanley J Akil, Huda Bunney, William E Vawter, Marquis P |
description | A considerable body of evidence supports the role of mitochondrial dysfunction in psychiatric disorders and mitochondrial DNA (mtDNA) mutations are known to alter brain energy metabolism, neurotransmission, and cause neurodegenerative disorders. Genetic studies focusing on common nuclear genome variants associated with these disorders have produced genome wide significant results but those studies have not directly studied mtDNA variants. The purpose of this study is to investigate, using next generation sequencing, the involvement of mtDNA variation in bipolar disorder, schizophrenia, major depressive disorder, and methamphetamine use. MtDNA extracted from multiple brain regions and blood were sequenced (121 mtDNA samples with an average of 8,800x coverage) and compared to an electronic database containing 26,850 mtDNA genomes. We confirmed novel and rare variants, and confirmed next generation sequencing error hotspots by traditional sequencing and genotyping methods. We observed a significant increase of non-synonymous mutations found in individuals with schizophrenia. Novel and rare non-synonymous mutations were found in psychiatric cases in mtDNA genes: ND6, ATP6, CYTB, and ND2. We also observed mtDNA heteroplasmy in brain at a locus previously associated with schizophrenia (T16519C). Large differences in heteroplasmy levels across brain regions within subjects suggest that somatic mutations accumulate differentially in brain regions. Finally, multiplasmy, a heteroplasmic measure of repeat length, was observed in brain from selective cases at a higher frequency than controls. These results offer support for increased rates of mtDNA substitutions in schizophrenia shown in our prior results. The variable levels of heteroplasmic/multiplasmic somatic mutations that occur in brain may be indicators of genetic instability in mtDNA. |
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Genetic studies focusing on common nuclear genome variants associated with these disorders have produced genome wide significant results but those studies have not directly studied mtDNA variants. The purpose of this study is to investigate, using next generation sequencing, the involvement of mtDNA variation in bipolar disorder, schizophrenia, major depressive disorder, and methamphetamine use. MtDNA extracted from multiple brain regions and blood were sequenced (121 mtDNA samples with an average of 8,800x coverage) and compared to an electronic database containing 26,850 mtDNA genomes. We confirmed novel and rare variants, and confirmed next generation sequencing error hotspots by traditional sequencing and genotyping methods. We observed a significant increase of non-synonymous mutations found in individuals with schizophrenia. Novel and rare non-synonymous mutations were found in psychiatric cases in mtDNA genes: ND6, ATP6, CYTB, and ND2. We also observed mtDNA heteroplasmy in brain at a locus previously associated with schizophrenia (T16519C). Large differences in heteroplasmy levels across brain regions within subjects suggest that somatic mutations accumulate differentially in brain regions. Finally, multiplasmy, a heteroplasmic measure of repeat length, was observed in brain from selective cases at a higher frequency than controls. These results offer support for increased rates of mtDNA substitutions in schizophrenia shown in our prior results. The variable levels of heteroplasmic/multiplasmic somatic mutations that occur in brain may be indicators of genetic instability in mtDNA.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0127280</identifier><identifier>PMID: 26011537</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Adult ; Bipolar disorder ; Brain ; Case-Control Studies ; Deoxyribonucleic acid ; Disorders ; DNA ; DNA Mutational Analysis ; DNA, Mitochondrial - genetics ; Electrophoresis, Agar Gel ; Energy metabolism ; Female ; Gene sequencing ; Genes ; Genetic aspects ; Genetic Loci ; Genomes ; Genomic instability ; Genomics ; Genotyping ; Heteroplasmy ; Humans ; Male ; Mental depression ; Mental disorders ; Mental Disorders - blood ; Mental Disorders - genetics ; Metabolism ; Methamphetamine ; Middle Aged ; Mitochondrial DNA ; Molecular Sequence Data ; Mutation ; Mutation - genetics ; Neurodegenerative diseases ; Neurotransmission ; Physiological aspects ; Prefrontal Cortex - pathology ; Schizophrenia ; Stability ; Studies</subject><ispartof>PloS one, 2015-05, Vol.10 (5), p.e0127280-e0127280</ispartof><rights>COPYRIGHT 2015 Public Library of Science</rights><rights>2015 Sequeira et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2015 Sequeira et al 2015 Sequeira et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c692t-b8a4d9a05782cf84869284c9ed053b94c7c90a7411def92a23df3116ccce88623</citedby><cites>FETCH-LOGICAL-c692t-b8a4d9a05782cf84869284c9ed053b94c7c90a7411def92a23df3116ccce88623</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4444211/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4444211/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2100,2926,23865,27923,27924,53790,53792,79371,79372</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26011537$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Kato, Tadafumi</contributor><creatorcontrib>Sequeira, Adolfo</creatorcontrib><creatorcontrib>Rollins, Brandi</creatorcontrib><creatorcontrib>Magnan, Christophe</creatorcontrib><creatorcontrib>van Oven, Mannis</creatorcontrib><creatorcontrib>Baldi, Pierre</creatorcontrib><creatorcontrib>Myers, Richard M</creatorcontrib><creatorcontrib>Barchas, Jack D</creatorcontrib><creatorcontrib>Schatzberg, Alan F</creatorcontrib><creatorcontrib>Watson, Stanley J</creatorcontrib><creatorcontrib>Akil, Huda</creatorcontrib><creatorcontrib>Bunney, William E</creatorcontrib><creatorcontrib>Vawter, Marquis P</creatorcontrib><title>Mitochondrial mutations in subjects with psychiatric disorders</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>A considerable body of evidence supports the role of mitochondrial dysfunction in psychiatric disorders and mitochondrial DNA (mtDNA) mutations are known to alter brain energy metabolism, neurotransmission, and cause neurodegenerative disorders. Genetic studies focusing on common nuclear genome variants associated with these disorders have produced genome wide significant results but those studies have not directly studied mtDNA variants. The purpose of this study is to investigate, using next generation sequencing, the involvement of mtDNA variation in bipolar disorder, schizophrenia, major depressive disorder, and methamphetamine use. MtDNA extracted from multiple brain regions and blood were sequenced (121 mtDNA samples with an average of 8,800x coverage) and compared to an electronic database containing 26,850 mtDNA genomes. We confirmed novel and rare variants, and confirmed next generation sequencing error hotspots by traditional sequencing and genotyping methods. We observed a significant increase of non-synonymous mutations found in individuals with schizophrenia. Novel and rare non-synonymous mutations were found in psychiatric cases in mtDNA genes: ND6, ATP6, CYTB, and ND2. We also observed mtDNA heteroplasmy in brain at a locus previously associated with schizophrenia (T16519C). Large differences in heteroplasmy levels across brain regions within subjects suggest that somatic mutations accumulate differentially in brain regions. Finally, multiplasmy, a heteroplasmic measure of repeat length, was observed in brain from selective cases at a higher frequency than controls. These results offer support for increased rates of mtDNA substitutions in schizophrenia shown in our prior results. The variable levels of heteroplasmic/multiplasmic somatic mutations that occur in brain may be indicators of genetic instability in mtDNA.</description><subject>Adult</subject><subject>Bipolar disorder</subject><subject>Brain</subject><subject>Case-Control Studies</subject><subject>Deoxyribonucleic acid</subject><subject>Disorders</subject><subject>DNA</subject><subject>DNA Mutational Analysis</subject><subject>DNA, Mitochondrial - genetics</subject><subject>Electrophoresis, Agar Gel</subject><subject>Energy metabolism</subject><subject>Female</subject><subject>Gene sequencing</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genetic Loci</subject><subject>Genomes</subject><subject>Genomic instability</subject><subject>Genomics</subject><subject>Genotyping</subject><subject>Heteroplasmy</subject><subject>Humans</subject><subject>Male</subject><subject>Mental depression</subject><subject>Mental disorders</subject><subject>Mental Disorders - blood</subject><subject>Mental Disorders - genetics</subject><subject>Metabolism</subject><subject>Methamphetamine</subject><subject>Middle Aged</subject><subject>Mitochondrial DNA</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>Mutation - genetics</subject><subject>Neurodegenerative diseases</subject><subject>Neurotransmission</subject><subject>Physiological aspects</subject><subject>Prefrontal Cortex - pathology</subject><subject>Schizophrenia</subject><subject>Stability</subject><subject>Studies</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>DOA</sourceid><recordid>eNqNkktv1DAUhSMEoqXwDxBEQkKwmMGv2M6mUlXxqFRUidfWumM7E48y8WA7QP89TietJqgLkkWi6--e42ufoniO0RJTgd9t_BB66JY739slwkQQiR4Ux7imZMEJog8P_o-KJzFuEKqo5PxxcUQ4wrii4rg4_eyS163vTXDQldshQXK-j6XryzisNlanWP52qS138Vq3DlJwujQu-mBsiE-LRw100T6bvifF9w_vv51_Wlxefbw4P7tcaF6TtFhJYKYGVAlJdCOZzFXJdG1N3tKqZlroGoFgGBvb1AQINQ3FmGutrZSc0JPi5V531_moptGjwlxSymtEWSYu9oTxsFG74LYQrpUHp24KPqwVhOR0ZxWtsmUev2ZixUgNAMwKbCgljAupR7fTyW1Yba3Rtk8BupnofKV3rVr7X4rlh2CcBd5MAsH_HGxMauuitl0HvfXDft-i4piMXq_-Qe-fbqLWkAdwfeOzrx5F1RmjpMKciZFa3kPl19it0zknjcv1WcPbWUNmkv2T1jDEqC6-fvl_9urHnH19wLYWutRG3w030ZqDbA_q4GMMtrk7ZIzUGPPb01BjzNUU89z24vCC7ppuc03_ArwH9ic</recordid><startdate>20150526</startdate><enddate>20150526</enddate><creator>Sequeira, Adolfo</creator><creator>Rollins, Brandi</creator><creator>Magnan, Christophe</creator><creator>van Oven, Mannis</creator><creator>Baldi, Pierre</creator><creator>Myers, Richard M</creator><creator>Barchas, Jack D</creator><creator>Schatzberg, Alan F</creator><creator>Watson, Stanley J</creator><creator>Akil, Huda</creator><creator>Bunney, William E</creator><creator>Vawter, Marquis P</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20150526</creationdate><title>Mitochondrial mutations in subjects with psychiatric disorders</title><author>Sequeira, Adolfo ; Rollins, Brandi ; Magnan, Christophe ; van Oven, Mannis ; Baldi, Pierre ; Myers, Richard M ; Barchas, Jack D ; Schatzberg, Alan F ; Watson, Stanley J ; Akil, Huda ; Bunney, William E ; Vawter, Marquis P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c692t-b8a4d9a05782cf84869284c9ed053b94c7c90a7411def92a23df3116ccce88623</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Adult</topic><topic>Bipolar disorder</topic><topic>Brain</topic><topic>Case-Control Studies</topic><topic>Deoxyribonucleic acid</topic><topic>Disorders</topic><topic>DNA</topic><topic>DNA Mutational Analysis</topic><topic>DNA, Mitochondrial - 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Genetic studies focusing on common nuclear genome variants associated with these disorders have produced genome wide significant results but those studies have not directly studied mtDNA variants. The purpose of this study is to investigate, using next generation sequencing, the involvement of mtDNA variation in bipolar disorder, schizophrenia, major depressive disorder, and methamphetamine use. MtDNA extracted from multiple brain regions and blood were sequenced (121 mtDNA samples with an average of 8,800x coverage) and compared to an electronic database containing 26,850 mtDNA genomes. We confirmed novel and rare variants, and confirmed next generation sequencing error hotspots by traditional sequencing and genotyping methods. We observed a significant increase of non-synonymous mutations found in individuals with schizophrenia. Novel and rare non-synonymous mutations were found in psychiatric cases in mtDNA genes: ND6, ATP6, CYTB, and ND2. We also observed mtDNA heteroplasmy in brain at a locus previously associated with schizophrenia (T16519C). Large differences in heteroplasmy levels across brain regions within subjects suggest that somatic mutations accumulate differentially in brain regions. Finally, multiplasmy, a heteroplasmic measure of repeat length, was observed in brain from selective cases at a higher frequency than controls. These results offer support for increased rates of mtDNA substitutions in schizophrenia shown in our prior results. The variable levels of heteroplasmic/multiplasmic somatic mutations that occur in brain may be indicators of genetic instability in mtDNA.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>26011537</pmid><doi>10.1371/journal.pone.0127280</doi><tpages>e0127280</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adult Bipolar disorder Brain Case-Control Studies Deoxyribonucleic acid Disorders DNA DNA Mutational Analysis DNA, Mitochondrial - genetics Electrophoresis, Agar Gel Energy metabolism Female Gene sequencing Genes Genetic aspects Genetic Loci Genomes Genomic instability Genomics Genotyping Heteroplasmy Humans Male Mental depression Mental disorders Mental Disorders - blood Mental Disorders - genetics Metabolism Methamphetamine Middle Aged Mitochondrial DNA Molecular Sequence Data Mutation Mutation - genetics Neurodegenerative diseases Neurotransmission Physiological aspects Prefrontal Cortex - pathology Schizophrenia Stability Studies |
title | Mitochondrial mutations in subjects with psychiatric disorders |
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