Morphological characters are compatible with mitogenomic data in resolving the phylogeny of nymphalid butterflies (lepidoptera: papilionoidea: nymphalidae)
Nymphalidae is the largest family of butterflies with their phylogenetic relationships not adequately approached to date. The mitochondrial genomes (mitogenomes) of 11 new nymphalid species were reported and a comparative mitogenomic analysis was conducted together with other 22 available nymphalid...
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| creator | Shi, Qing-Hui Sun, Xiao-Yan Wang, Yun-Liang Hao, Jia-Sheng Yang, Qun |
| description | Nymphalidae is the largest family of butterflies with their phylogenetic relationships not adequately approached to date. The mitochondrial genomes (mitogenomes) of 11 new nymphalid species were reported and a comparative mitogenomic analysis was conducted together with other 22 available nymphalid mitogenomes. A phylogenetic analysis of the 33 species from all 13 currently recognized nymphalid subfamilies was done based on the mitogenomic data set with three Lycaenidae species as the outgroups. The mitogenome comparison showed that the eleven new mitogenomes were similar with those of other butterflies in gene content and order. The reconstructed phylogenetic trees reveal that the nymphalids are made up of five major clades (the nymphaline, heliconiine, satyrine, danaine and libytheine clades), with sister relationship between subfamilies Cyrestinae and Biblidinae, and most likely between subfamilies Morphinae and Satyrinae. This whole mitogenome-based phylogeny is generally congruent with those of former studies based on nuclear-gene and mitogenomic analyses, but differs considerably from the result of morphological cladistic analysis, such as the basal position of Libytheinae in morpho-phylogeny is not confirmed in molecular studies. However, we found that the mitogenomic phylogeny established herein is compatible with selected morphological characters (including developmental and adult morpho-characters). |
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The mitochondrial genomes (mitogenomes) of 11 new nymphalid species were reported and a comparative mitogenomic analysis was conducted together with other 22 available nymphalid mitogenomes. A phylogenetic analysis of the 33 species from all 13 currently recognized nymphalid subfamilies was done based on the mitogenomic data set with three Lycaenidae species as the outgroups. The mitogenome comparison showed that the eleven new mitogenomes were similar with those of other butterflies in gene content and order. The reconstructed phylogenetic trees reveal that the nymphalids are made up of five major clades (the nymphaline, heliconiine, satyrine, danaine and libytheine clades), with sister relationship between subfamilies Cyrestinae and Biblidinae, and most likely between subfamilies Morphinae and Satyrinae. This whole mitogenome-based phylogeny is generally congruent with those of former studies based on nuclear-gene and mitogenomic analyses, but differs considerably from the result of morphological cladistic analysis, such as the basal position of Libytheinae in morpho-phylogeny is not confirmed in molecular studies. However, we found that the mitogenomic phylogeny established herein is compatible with selected morphological characters (including developmental and adult morpho-characters).</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0124349</identifier><identifier>PMID: 25860387</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Analysis ; Animals ; Butterflies ; Butterflies & moths ; Butterflies - anatomy & histology ; Butterflies - classification ; Butterflies - genetics ; Charaxinae ; Cladistic analysis ; Codon - genetics ; Deoxyribonucleic acid ; DNA ; Genes ; Genes, rRNA ; Genetic aspects ; Genome, Insect ; Genome, Mitochondrial ; Genomes ; Genomics ; Geometridae ; Heliconiinae ; Laboratories ; Lepidoptera ; Life sciences ; Mitochondria ; Molecular Sequence Data ; Morphinae ; Morphology ; Nymphalidae ; Papilionoidea ; Phylogenetics ; Phylogeny ; RNA, Transfer - genetics ; RNA, Untranslated - genetics ; Satyrinae ; Software ; Species ; Species Specificity ; Studies ; Transfer RNA</subject><ispartof>PloS one, 2015-04, Vol.10 (4), p.e0124349-e0124349</ispartof><rights>COPYRIGHT 2015 Public Library of Science</rights><rights>2015 Shi et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2015 Shi et al 2015 Shi et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c692t-4b571521d65fa3d99a025725eab8e1a8803331b667a1bec460d7c049e3dcdce53</citedby><cites>FETCH-LOGICAL-c692t-4b571521d65fa3d99a025725eab8e1a8803331b667a1bec460d7c049e3dcdce53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4393276/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4393276/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79342,79343</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25860387$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Shi, Qing-Hui</creatorcontrib><creatorcontrib>Sun, Xiao-Yan</creatorcontrib><creatorcontrib>Wang, Yun-Liang</creatorcontrib><creatorcontrib>Hao, Jia-Sheng</creatorcontrib><creatorcontrib>Yang, Qun</creatorcontrib><title>Morphological characters are compatible with mitogenomic data in resolving the phylogeny of nymphalid butterflies (lepidoptera: papilionoidea: nymphalidae)</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Nymphalidae is the largest family of butterflies with their phylogenetic relationships not adequately approached to date. The mitochondrial genomes (mitogenomes) of 11 new nymphalid species were reported and a comparative mitogenomic analysis was conducted together with other 22 available nymphalid mitogenomes. A phylogenetic analysis of the 33 species from all 13 currently recognized nymphalid subfamilies was done based on the mitogenomic data set with three Lycaenidae species as the outgroups. The mitogenome comparison showed that the eleven new mitogenomes were similar with those of other butterflies in gene content and order. The reconstructed phylogenetic trees reveal that the nymphalids are made up of five major clades (the nymphaline, heliconiine, satyrine, danaine and libytheine clades), with sister relationship between subfamilies Cyrestinae and Biblidinae, and most likely between subfamilies Morphinae and Satyrinae. 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However, we found that the mitogenomic phylogeny established herein is compatible with selected morphological characters (including developmental and adult morpho-characters).</description><subject>Analysis</subject><subject>Animals</subject><subject>Butterflies</subject><subject>Butterflies & moths</subject><subject>Butterflies - anatomy & histology</subject><subject>Butterflies - classification</subject><subject>Butterflies - genetics</subject><subject>Charaxinae</subject><subject>Cladistic analysis</subject><subject>Codon - genetics</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Genes</subject><subject>Genes, rRNA</subject><subject>Genetic aspects</subject><subject>Genome, Insect</subject><subject>Genome, Mitochondrial</subject><subject>Genomes</subject><subject>Genomics</subject><subject>Geometridae</subject><subject>Heliconiinae</subject><subject>Laboratories</subject><subject>Lepidoptera</subject><subject>Life sciences</subject><subject>Mitochondria</subject><subject>Molecular Sequence Data</subject><subject>Morphinae</subject><subject>Morphology</subject><subject>Nymphalidae</subject><subject>Papilionoidea</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>RNA, Transfer - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Shi, Qing-Hui</au><au>Sun, Xiao-Yan</au><au>Wang, Yun-Liang</au><au>Hao, Jia-Sheng</au><au>Yang, Qun</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Morphological characters are compatible with mitogenomic data in resolving the phylogeny of nymphalid butterflies (lepidoptera: papilionoidea: nymphalidae)</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2015-04-10</date><risdate>2015</risdate><volume>10</volume><issue>4</issue><spage>e0124349</spage><epage>e0124349</epage><pages>e0124349-e0124349</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Nymphalidae is the largest family of butterflies with their phylogenetic relationships not adequately approached to date. The mitochondrial genomes (mitogenomes) of 11 new nymphalid species were reported and a comparative mitogenomic analysis was conducted together with other 22 available nymphalid mitogenomes. A phylogenetic analysis of the 33 species from all 13 currently recognized nymphalid subfamilies was done based on the mitogenomic data set with three Lycaenidae species as the outgroups. The mitogenome comparison showed that the eleven new mitogenomes were similar with those of other butterflies in gene content and order. The reconstructed phylogenetic trees reveal that the nymphalids are made up of five major clades (the nymphaline, heliconiine, satyrine, danaine and libytheine clades), with sister relationship between subfamilies Cyrestinae and Biblidinae, and most likely between subfamilies Morphinae and Satyrinae. This whole mitogenome-based phylogeny is generally congruent with those of former studies based on nuclear-gene and mitogenomic analyses, but differs considerably from the result of morphological cladistic analysis, such as the basal position of Libytheinae in morpho-phylogeny is not confirmed in molecular studies. However, we found that the mitogenomic phylogeny established herein is compatible with selected morphological characters (including developmental and adult morpho-characters).</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>25860387</pmid><doi>10.1371/journal.pone.0124349</doi><oa>free_for_read</oa></addata></record> |
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| subjects | Analysis Animals Butterflies Butterflies & moths Butterflies - anatomy & histology Butterflies - classification Butterflies - genetics Charaxinae Cladistic analysis Codon - genetics Deoxyribonucleic acid DNA Genes Genes, rRNA Genetic aspects Genome, Insect Genome, Mitochondrial Genomes Genomics Geometridae Heliconiinae Laboratories Lepidoptera Life sciences Mitochondria Molecular Sequence Data Morphinae Morphology Nymphalidae Papilionoidea Phylogenetics Phylogeny RNA, Transfer - genetics RNA, Untranslated - genetics Satyrinae Software Species Species Specificity Studies Transfer RNA |
| title | Morphological characters are compatible with mitogenomic data in resolving the phylogeny of nymphalid butterflies (lepidoptera: papilionoidea: nymphalidae) |
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