RNA-seq analysis of Quercus pubescens Leaves: de novo transcriptome assembly, annotation and functional markers development

Quercus pubescens Willd., a species distributed from Spain to southwest Asia, ranks high for drought tolerance among European oaks. Q. pubescens performs a role of outstanding significance in most Mediterranean forest ecosystems, but few mechanistic studies have been conducted to explore its respons...

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Veröffentlicht in:	PloS one 2014-11, Vol.9 (11), p.e112487-e112487
Hauptverfasser:	Torre, Sara, Tattini, Massimiliano, Brunetti, Cecilia, Fineschi, Silvia, Fini, Alessio, Ferrini, Francesco, Sebastiani, Federico
Format:	Artikel
Sprache:	eng
Schlagworte:	Annotations Arabidopsis thaliana Assembly Biology Biology and Life Sciences Biosynthesis Climate change Computational Biology Contig Mapping Councils Databases, Genetic Drought Drought resistance Droughts Ecosystem Ecosystem biology Environmental science Expressed Sequence Tags Food Forest ecosystems Forests Gene expression Gene sequencing Genetic Markers Genomics High-Throughput Nucleotide Sequencing Leaves Markers Mediterranean climate Mediterranean Region Microsatellites Molecular Sequence Annotation Morphology Oaks Plant Leaves - genetics Polymorphism, Single Nucleotide Population genetics Population studies Quercus - genetics Quercus pubescens Ribonucleic acid RNA RNA, Plant - genetics Sequence Analysis, RNA Single-nucleotide polymorphism Terrestrial ecosystems Transcriptome Trees Trends
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