Automated quantification reveals hyperglycemia inhibits endothelial angiogenic function
Diabetes Mellitus (DM) has reached epidemic levels globally. A contributing factor to the development of DM is high blood glucose (hyperglycemia). One complication associated with DM is a decreased angiogenesis. The Matrigel tube formation assay (TFA) is the most widely utilized in vitro assay desig...
Gespeichert in:
Veröffentlicht in: | PloS one 2014-04, Vol.9 (4), p.e94599-e94599 |
---|---|
Hauptverfasser: | , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | e94599 |
---|---|
container_issue | 4 |
container_start_page | e94599 |
container_title | PloS one |
container_volume | 9 |
creator | Prisco, Anthony R Bukowy, John D Hoffmann, Brian R Karcher, Jamie R Exner, Eric C Greene, Andrew S |
description | Diabetes Mellitus (DM) has reached epidemic levels globally. A contributing factor to the development of DM is high blood glucose (hyperglycemia). One complication associated with DM is a decreased angiogenesis. The Matrigel tube formation assay (TFA) is the most widely utilized in vitro assay designed to assess angiogenic factors and conditions. In spite of the widespread use of Matrigel TFAs, quantification is labor-intensive and subjective, often limiting experiential design and interpretation of results. This study describes the development and validation of an open source software tool for high throughput, morphometric analysis of TFA images and the validation of an in vitro hyperglycemic model of DM.
Endothelial cells mimic angiogenesis when placed onto a Matrigel coated surface by forming tube-like structures. The goal of this study was to develop an open-source software algorithm requiring minimal user input (Pipeline v1.3) to automatically quantify tubular metrics from TFA images. Using Pipeline, the ability of endothelial cells to form tubes was assessed after culture in normal or high glucose for 1 or 2 weeks. A significant decrease in the total tube length and number of branch points was found when comparing groups treated with high glucose for 2 weeks versus normal glucose or 1 week of high glucose.
Using Pipeline, it was determined that hyperglycemia inhibits formation of endothelial tubes in vitro. Analysis using Pipeline was more accurate and significantly faster than manual analysis. The Pipeline algorithm was shown to have additional applications, such as detection of retinal vasculature. |
doi_str_mv | 10.1371/journal.pone.0094599 |
format | Article |
fullrecord | <record><control><sourceid>gale_plos_</sourceid><recordid>TN_cdi_plos_journals_1514316472</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A375583773</galeid><doaj_id>oai_doaj_org_article_56f50220b18240449ea0e80f008dd84d</doaj_id><sourcerecordid>A375583773</sourcerecordid><originalsourceid>FETCH-LOGICAL-c585t-bc600a6de72f962f780bd279dd330fce8ccc53c75329e0cacd62b23b8b2eabb93</originalsourceid><addsrcrecordid>eNptkluL1DAYhoso7rr6D0QLgngzYw5NmtwIw-JhYcEbxcuQJl_bDJlktkkX5t_b7nSXGfEqIXne9zsWxVuM1pjW-PM2jkPQfr2PAdYIyYpJ-ay4xJKSFSeIPj-5XxSvUtoixKjg_GVxQaoaC47ZZfFnM-a40xlseTfqkF3rjM4uhnKAe9A-lf1hD0PnDwZ2Tpcu9K5xOZUQbMw9eKd9qUPnYgfBmbIdg5nlr4sX7aSGN8t5Vfz-9vXX9Y_V7c_vN9eb25VhguVVYzhCmluoSSs5aWuBGktqaS2lqDUgjDGMmppRIgEZbSwnDaGNaAjoppH0qnh_9N37mNTSk6QwwxXFvKrJRNwcCRv1Vu0Ht9PDQUXt1MNDHDqlh-yMB8V4yxAhqMGCVKiqJGgEArUICWtFZSevL0u0sdmBNRDyoP2Z6flPcL3q4r2iUmCB8WTwaTEY4t0IKaudSwa81wHi-JA34xWSUkzoh3_Q_1e3UJ2eCnChjVNcM5uqDa0ZE7Su6UR9PKH6aa65T9GP86TSOVgdQTPElAZon2rDSM1r95iEmtdOLWs3yd6d9uVJ9Lhn9C-redZx</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1514316472</pqid></control><display><type>article</type><title>Automated quantification reveals hyperglycemia inhibits endothelial angiogenic function</title><source>Public Library of Science (PLoS) Journals Open Access</source><source>MEDLINE</source><source>DOAJ Directory of Open Access Journals</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>PubMed Central</source><source>Free Full-Text Journals in Chemistry</source><creator>Prisco, Anthony R ; Bukowy, John D ; Hoffmann, Brian R ; Karcher, Jamie R ; Exner, Eric C ; Greene, Andrew S</creator><creatorcontrib>Prisco, Anthony R ; Bukowy, John D ; Hoffmann, Brian R ; Karcher, Jamie R ; Exner, Eric C ; Greene, Andrew S</creatorcontrib><description>Diabetes Mellitus (DM) has reached epidemic levels globally. A contributing factor to the development of DM is high blood glucose (hyperglycemia). One complication associated with DM is a decreased angiogenesis. The Matrigel tube formation assay (TFA) is the most widely utilized in vitro assay designed to assess angiogenic factors and conditions. In spite of the widespread use of Matrigel TFAs, quantification is labor-intensive and subjective, often limiting experiential design and interpretation of results. This study describes the development and validation of an open source software tool for high throughput, morphometric analysis of TFA images and the validation of an in vitro hyperglycemic model of DM.
Endothelial cells mimic angiogenesis when placed onto a Matrigel coated surface by forming tube-like structures. The goal of this study was to develop an open-source software algorithm requiring minimal user input (Pipeline v1.3) to automatically quantify tubular metrics from TFA images. Using Pipeline, the ability of endothelial cells to form tubes was assessed after culture in normal or high glucose for 1 or 2 weeks. A significant decrease in the total tube length and number of branch points was found when comparing groups treated with high glucose for 2 weeks versus normal glucose or 1 week of high glucose.
Using Pipeline, it was determined that hyperglycemia inhibits formation of endothelial tubes in vitro. Analysis using Pipeline was more accurate and significantly faster than manual analysis. The Pipeline algorithm was shown to have additional applications, such as detection of retinal vasculature.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0094599</identifier><identifier>PMID: 24718615</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Algorithms ; Angiogenesis ; Animals ; Atherosclerosis ; Automation ; Bioengineering ; Biology and Life Sciences ; Biotechnology ; Cell culture ; Complications and side effects ; Computer and Information Sciences ; Computer programs ; Computer Simulation ; Diabetes ; Diabetes mellitus ; Diabetic retinopathy ; Endothelial cells ; Endothelial Cells - pathology ; Endothelium ; Engineering and Technology ; Epidemics ; Glucose ; Hyperglycemia ; Hyperglycemia - pathology ; Medicine and Health Sciences ; Microvessels - pathology ; Morphometry ; Myocardium - pathology ; Neovascularization ; Neovascularization, Physiologic ; Nitric oxide ; Open source software ; Physical Sciences ; Physiological aspects ; Physiology ; Rats ; Retina ; Retinal Vessels - pathology ; Software development tools ; Source code ; Tubes ; User-Computer Interface</subject><ispartof>PloS one, 2014-04, Vol.9 (4), p.e94599-e94599</ispartof><rights>COPYRIGHT 2014 Public Library of Science</rights><rights>2014 Prisco et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2014 Prisco et al 2014 Prisco et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c585t-bc600a6de72f962f780bd279dd330fce8ccc53c75329e0cacd62b23b8b2eabb93</citedby><cites>FETCH-LOGICAL-c585t-bc600a6de72f962f780bd279dd330fce8ccc53c75329e0cacd62b23b8b2eabb93</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3981811/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3981811/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79569,79570</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24718615$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Prisco, Anthony R</creatorcontrib><creatorcontrib>Bukowy, John D</creatorcontrib><creatorcontrib>Hoffmann, Brian R</creatorcontrib><creatorcontrib>Karcher, Jamie R</creatorcontrib><creatorcontrib>Exner, Eric C</creatorcontrib><creatorcontrib>Greene, Andrew S</creatorcontrib><title>Automated quantification reveals hyperglycemia inhibits endothelial angiogenic function</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Diabetes Mellitus (DM) has reached epidemic levels globally. A contributing factor to the development of DM is high blood glucose (hyperglycemia). One complication associated with DM is a decreased angiogenesis. The Matrigel tube formation assay (TFA) is the most widely utilized in vitro assay designed to assess angiogenic factors and conditions. In spite of the widespread use of Matrigel TFAs, quantification is labor-intensive and subjective, often limiting experiential design and interpretation of results. This study describes the development and validation of an open source software tool for high throughput, morphometric analysis of TFA images and the validation of an in vitro hyperglycemic model of DM.
Endothelial cells mimic angiogenesis when placed onto a Matrigel coated surface by forming tube-like structures. The goal of this study was to develop an open-source software algorithm requiring minimal user input (Pipeline v1.3) to automatically quantify tubular metrics from TFA images. Using Pipeline, the ability of endothelial cells to form tubes was assessed after culture in normal or high glucose for 1 or 2 weeks. A significant decrease in the total tube length and number of branch points was found when comparing groups treated with high glucose for 2 weeks versus normal glucose or 1 week of high glucose.
Using Pipeline, it was determined that hyperglycemia inhibits formation of endothelial tubes in vitro. Analysis using Pipeline was more accurate and significantly faster than manual analysis. The Pipeline algorithm was shown to have additional applications, such as detection of retinal vasculature.</description><subject>Algorithms</subject><subject>Angiogenesis</subject><subject>Animals</subject><subject>Atherosclerosis</subject><subject>Automation</subject><subject>Bioengineering</subject><subject>Biology and Life Sciences</subject><subject>Biotechnology</subject><subject>Cell culture</subject><subject>Complications and side effects</subject><subject>Computer and Information Sciences</subject><subject>Computer programs</subject><subject>Computer Simulation</subject><subject>Diabetes</subject><subject>Diabetes mellitus</subject><subject>Diabetic retinopathy</subject><subject>Endothelial cells</subject><subject>Endothelial Cells - pathology</subject><subject>Endothelium</subject><subject>Engineering and Technology</subject><subject>Epidemics</subject><subject>Glucose</subject><subject>Hyperglycemia</subject><subject>Hyperglycemia - pathology</subject><subject>Medicine and Health Sciences</subject><subject>Microvessels - pathology</subject><subject>Morphometry</subject><subject>Myocardium - pathology</subject><subject>Neovascularization</subject><subject>Neovascularization, Physiologic</subject><subject>Nitric oxide</subject><subject>Open source software</subject><subject>Physical Sciences</subject><subject>Physiological aspects</subject><subject>Physiology</subject><subject>Rats</subject><subject>Retina</subject><subject>Retinal Vessels - pathology</subject><subject>Software development tools</subject><subject>Source code</subject><subject>Tubes</subject><subject>User-Computer Interface</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNptkluL1DAYhoso7rr6D0QLgngzYw5NmtwIw-JhYcEbxcuQJl_bDJlktkkX5t_b7nSXGfEqIXne9zsWxVuM1pjW-PM2jkPQfr2PAdYIyYpJ-ay4xJKSFSeIPj-5XxSvUtoixKjg_GVxQaoaC47ZZfFnM-a40xlseTfqkF3rjM4uhnKAe9A-lf1hD0PnDwZ2Tpcu9K5xOZUQbMw9eKd9qUPnYgfBmbIdg5nlr4sX7aSGN8t5Vfz-9vXX9Y_V7c_vN9eb25VhguVVYzhCmluoSSs5aWuBGktqaS2lqDUgjDGMmppRIgEZbSwnDaGNaAjoppH0qnh_9N37mNTSk6QwwxXFvKrJRNwcCRv1Vu0Ht9PDQUXt1MNDHDqlh-yMB8V4yxAhqMGCVKiqJGgEArUICWtFZSevL0u0sdmBNRDyoP2Z6flPcL3q4r2iUmCB8WTwaTEY4t0IKaudSwa81wHi-JA34xWSUkzoh3_Q_1e3UJ2eCnChjVNcM5uqDa0ZE7Su6UR9PKH6aa65T9GP86TSOVgdQTPElAZon2rDSM1r95iEmtdOLWs3yd6d9uVJ9Lhn9C-redZx</recordid><startdate>20140409</startdate><enddate>20140409</enddate><creator>Prisco, Anthony R</creator><creator>Bukowy, John D</creator><creator>Hoffmann, Brian R</creator><creator>Karcher, Jamie R</creator><creator>Exner, Eric C</creator><creator>Greene, Andrew S</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PHGZM</scope><scope>PHGZT</scope><scope>PIMPY</scope><scope>PJZUB</scope><scope>PKEHL</scope><scope>PPXIY</scope><scope>PQEST</scope><scope>PQGLB</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20140409</creationdate><title>Automated quantification reveals hyperglycemia inhibits endothelial angiogenic function</title><author>Prisco, Anthony R ; Bukowy, John D ; Hoffmann, Brian R ; Karcher, Jamie R ; Exner, Eric C ; Greene, Andrew S</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c585t-bc600a6de72f962f780bd279dd330fce8ccc53c75329e0cacd62b23b8b2eabb93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Algorithms</topic><topic>Angiogenesis</topic><topic>Animals</topic><topic>Atherosclerosis</topic><topic>Automation</topic><topic>Bioengineering</topic><topic>Biology and Life Sciences</topic><topic>Biotechnology</topic><topic>Cell culture</topic><topic>Complications and side effects</topic><topic>Computer and Information Sciences</topic><topic>Computer programs</topic><topic>Computer Simulation</topic><topic>Diabetes</topic><topic>Diabetes mellitus</topic><topic>Diabetic retinopathy</topic><topic>Endothelial cells</topic><topic>Endothelial Cells - pathology</topic><topic>Endothelium</topic><topic>Engineering and Technology</topic><topic>Epidemics</topic><topic>Glucose</topic><topic>Hyperglycemia</topic><topic>Hyperglycemia - pathology</topic><topic>Medicine and Health Sciences</topic><topic>Microvessels - pathology</topic><topic>Morphometry</topic><topic>Myocardium - pathology</topic><topic>Neovascularization</topic><topic>Neovascularization, Physiologic</topic><topic>Nitric oxide</topic><topic>Open source software</topic><topic>Physical Sciences</topic><topic>Physiological aspects</topic><topic>Physiology</topic><topic>Rats</topic><topic>Retina</topic><topic>Retinal Vessels - pathology</topic><topic>Software development tools</topic><topic>Source code</topic><topic>Tubes</topic><topic>User-Computer Interface</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Prisco, Anthony R</creatorcontrib><creatorcontrib>Bukowy, John D</creatorcontrib><creatorcontrib>Hoffmann, Brian R</creatorcontrib><creatorcontrib>Karcher, Jamie R</creatorcontrib><creatorcontrib>Exner, Eric C</creatorcontrib><creatorcontrib>Greene, Andrew S</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Nursing & Allied Health Database</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Meteorological & Geoastrophysical Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies & Aerospace Collection</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>Meteorological & Geoastrophysical Abstracts - Academic</collection><collection>ProQuest Engineering Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Engineering Database</collection><collection>Nursing & Allied Health Premium</collection><collection>Advanced Technologies & Aerospace Database</collection><collection>ProQuest Advanced Technologies & Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>Materials Science Collection</collection><collection>ProQuest Central (New)</collection><collection>ProQuest One Academic (New)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest Health & Medical Research Collection</collection><collection>ProQuest One Academic Middle East (New)</collection><collection>ProQuest One Health & Nursing</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Applied & Life Sciences</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Engineering Collection</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Prisco, Anthony R</au><au>Bukowy, John D</au><au>Hoffmann, Brian R</au><au>Karcher, Jamie R</au><au>Exner, Eric C</au><au>Greene, Andrew S</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Automated quantification reveals hyperglycemia inhibits endothelial angiogenic function</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2014-04-09</date><risdate>2014</risdate><volume>9</volume><issue>4</issue><spage>e94599</spage><epage>e94599</epage><pages>e94599-e94599</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Diabetes Mellitus (DM) has reached epidemic levels globally. A contributing factor to the development of DM is high blood glucose (hyperglycemia). One complication associated with DM is a decreased angiogenesis. The Matrigel tube formation assay (TFA) is the most widely utilized in vitro assay designed to assess angiogenic factors and conditions. In spite of the widespread use of Matrigel TFAs, quantification is labor-intensive and subjective, often limiting experiential design and interpretation of results. This study describes the development and validation of an open source software tool for high throughput, morphometric analysis of TFA images and the validation of an in vitro hyperglycemic model of DM.
Endothelial cells mimic angiogenesis when placed onto a Matrigel coated surface by forming tube-like structures. The goal of this study was to develop an open-source software algorithm requiring minimal user input (Pipeline v1.3) to automatically quantify tubular metrics from TFA images. Using Pipeline, the ability of endothelial cells to form tubes was assessed after culture in normal or high glucose for 1 or 2 weeks. A significant decrease in the total tube length and number of branch points was found when comparing groups treated with high glucose for 2 weeks versus normal glucose or 1 week of high glucose.
Using Pipeline, it was determined that hyperglycemia inhibits formation of endothelial tubes in vitro. Analysis using Pipeline was more accurate and significantly faster than manual analysis. The Pipeline algorithm was shown to have additional applications, such as detection of retinal vasculature.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>24718615</pmid><doi>10.1371/journal.pone.0094599</doi><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1932-6203 |
ispartof | PloS one, 2014-04, Vol.9 (4), p.e94599-e94599 |
issn | 1932-6203 1932-6203 |
language | eng |
recordid | cdi_plos_journals_1514316472 |
source | Public Library of Science (PLoS) Journals Open Access; MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Algorithms Angiogenesis Animals Atherosclerosis Automation Bioengineering Biology and Life Sciences Biotechnology Cell culture Complications and side effects Computer and Information Sciences Computer programs Computer Simulation Diabetes Diabetes mellitus Diabetic retinopathy Endothelial cells Endothelial Cells - pathology Endothelium Engineering and Technology Epidemics Glucose Hyperglycemia Hyperglycemia - pathology Medicine and Health Sciences Microvessels - pathology Morphometry Myocardium - pathology Neovascularization Neovascularization, Physiologic Nitric oxide Open source software Physical Sciences Physiological aspects Physiology Rats Retina Retinal Vessels - pathology Software development tools Source code Tubes User-Computer Interface |
title | Automated quantification reveals hyperglycemia inhibits endothelial angiogenic function |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-21T17%3A45%3A03IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Automated%20quantification%20reveals%20hyperglycemia%20inhibits%20endothelial%20angiogenic%20function&rft.jtitle=PloS%20one&rft.au=Prisco,%20Anthony%20R&rft.date=2014-04-09&rft.volume=9&rft.issue=4&rft.spage=e94599&rft.epage=e94599&rft.pages=e94599-e94599&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0094599&rft_dat=%3Cgale_plos_%3EA375583773%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1514316472&rft_id=info:pmid/24718615&rft_galeid=A375583773&rft_doaj_id=oai_doaj_org_article_56f50220b18240449ea0e80f008dd84d&rfr_iscdi=true |