Novel coronavirus and astrovirus in Delaware Bay shorebirds
Wild birds are an important but to some extent under-studied reservoir for emerging pathogens. We used unbiased sequencing methods for virus discovery in shorebird samples from the Delaware Bay, USA; an important feeding ground for thousands of migratory birds. Analysis of shorebird fecal samples in...
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| Veröffentlicht in: | PloS one 2014-04, Vol.9 (4), p.e93395-e93395 |
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| creator | Honkavuori, Kirsi S Briese, Thomas Krauss, Scott Sanchez, Maria D Jain, Komal Hutchison, Stephen K Webster, Robert G Lipkin, W Ian |
| description | Wild birds are an important but to some extent under-studied reservoir for emerging pathogens. We used unbiased sequencing methods for virus discovery in shorebird samples from the Delaware Bay, USA; an important feeding ground for thousands of migratory birds.
Analysis of shorebird fecal samples indicated the presence of a novel astrovirus and coronavirus. A sanderling sample yielded sequences with distant homology to avian nephritis virus 1, an astrovirus associated with acute nephritis in poultry. A ruddy turnstone sample yielded sequences with homology to deltacoronaviruses.
Our findings highlight shorebirds as a virus reservoir and the need to closely monitor wild bird populations for the emergence of novel virus variants. |
| doi_str_mv | 10.1371/journal.pone.0093395 |
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Analysis of shorebird fecal samples indicated the presence of a novel astrovirus and coronavirus. A sanderling sample yielded sequences with distant homology to avian nephritis virus 1, an astrovirus associated with acute nephritis in poultry. A ruddy turnstone sample yielded sequences with homology to deltacoronaviruses.
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Analysis of shorebird fecal samples indicated the presence of a novel astrovirus and coronavirus. A sanderling sample yielded sequences with distant homology to avian nephritis virus 1, an astrovirus associated with acute nephritis in poultry. A ruddy turnstone sample yielded sequences with homology to deltacoronaviruses.
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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Honkavuori, Kirsi S</au><au>Briese, Thomas</au><au>Krauss, Scott</au><au>Sanchez, Maria D</au><au>Jain, Komal</au><au>Hutchison, Stephen K</au><au>Webster, Robert G</au><au>Lipkin, W Ian</au><au>Munster, Vincent Jacobus</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Novel coronavirus and astrovirus in Delaware Bay shorebirds</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2014-04-03</date><risdate>2014</risdate><volume>9</volume><issue>4</issue><spage>e93395</spage><epage>e93395</epage><pages>e93395-e93395</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Wild birds are an important but to some extent under-studied reservoir for emerging pathogens. We used unbiased sequencing methods for virus discovery in shorebird samples from the Delaware Bay, USA; an important feeding ground for thousands of migratory birds.
Analysis of shorebird fecal samples indicated the presence of a novel astrovirus and coronavirus. A sanderling sample yielded sequences with distant homology to avian nephritis virus 1, an astrovirus associated with acute nephritis in poultry. A ruddy turnstone sample yielded sequences with homology to deltacoronaviruses.
Our findings highlight shorebirds as a virus reservoir and the need to closely monitor wild bird populations for the emergence of novel virus variants.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>24699424</pmid><doi>10.1371/journal.pone.0093395</doi><oa>free_for_read</oa></addata></record> |
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| subjects | Animals Aquatic birds Astroviridae - genetics Astroviridae Infections - virology Bays Biology and Life Sciences Bird Diseases - virology Bird populations Birds Birds - virology Coronaviridae Coronavirus - genetics Coronavirus Infections - virology Coronaviruses Cytochrome Delaware Feces Feces - chemistry Health care Homology Infections Infectious diseases Influenza Life sciences Medicine and Health Sciences Migratory birds Nephritis Phylogenetics Polymerase chain reaction Public health Severe acute respiratory syndrome Surveillance Viruses West Nile virus |
| title | Novel coronavirus and astrovirus in Delaware Bay shorebirds |
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