Cover cropping alters the diet of arthropods in a banana plantation: a metabarcoding approach

Plant diversification using cover crops may promote natural regulation of agricultural pests by supporting alternative prey that enable the increase of arthropod predator densities. However, the changes in the specific composition of predator diet induced by cover cropping are poorly understood. Her...

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Veröffentlicht in:PloS one 2014-04, Vol.9 (4), p.e93740-e93740
Hauptverfasser: Mollot, Gregory, Duyck, Pierre-François, Lefeuvre, Pierre, Lescourret, Françoise, Martin, Jean-François, Piry, Sylvain, Canard, Elsa, Tixier, Philippe
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container_title PloS one
container_volume 9
creator Mollot, Gregory
Duyck, Pierre-François
Lefeuvre, Pierre
Lescourret, Françoise
Martin, Jean-François
Piry, Sylvain
Canard, Elsa
Tixier, Philippe
description Plant diversification using cover crops may promote natural regulation of agricultural pests by supporting alternative prey that enable the increase of arthropod predator densities. However, the changes in the specific composition of predator diet induced by cover cropping are poorly understood. Here, we hypothesized that the cover crop can significantly alter the diet of predators in agroecosystems. The cover crop Brachiaria decumbens is increasingly used in banana plantations to control weeds and improve physical soil properties. In this paper, we used a DNA metabarcoding approach for the molecular analysis of the gut contents of predators (based on mini-COI) to identify 1) the DNA sequences of their prey, 2) the predators of Cosmopolites sordidus (a major pest of banana crops), and 3) the difference in the specific composition of predator diets between a bare soil plot (BSP) and a cover cropped plot (CCP) in a banana plantation. The earwig Euborellia caraibea, the carpenter ant Camponotus sexguttatus, and the fire ant Solenopsis geminata were found to contain C. sordidus DNA at frequencies ranging from 1 to 7%. While the frequencies of predators positive for C. sordidus DNA did not significantly differ between BSP and CCP, the frequency at which E. caraibea was positive for Diptera was 26% in BSP and 80% in CCP; the frequency at which C. sexguttatus was positive for Jalysus spinosus was 14% in BSP and 0% in CCP; and the frequency at which S. geminata was positive for Polytus mellerborgi was 21% in BSP and 3% in CCP. E. caraibea, C. sexguttatus and S. geminata were identified as possible biological agents for the regulation of C. sordidus. The detection of the diet changes of these predators when a cover crop is planted indicates the possible negative effects on pest regulation if predators switch to forage on alternative prey.
doi_str_mv 10.1371/journal.pone.0093740
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The detection of the diet changes of these predators when a cover crop is planted indicates the possible negative effects on pest regulation if predators switch to forage on alternative prey.</description><subject>Agricultural ecology</subject><subject>Agricultural ecosystems</subject><subject>Agricultural pests</subject><subject>Agricultural practices</subject><subject>Agricultural sciences</subject><subject>Analysis</subject><subject>Animal biology</subject><subject>Animals</subject><subject>Arthropods</subject><subject>Biodiversity</subject><subject>Biodiversity and Ecology</subject><subject>Biology and Life Sciences</subject><subject>Brachiaria decumbens</subject><subject>Camponotus sexguttatus</subject><subject>Cosmopolites sordidus</subject><subject>Cover crops</subject><subject>Crops</subject><subject>Crops, Agricultural</subject><subject>Deoxyribonucleic acid</subject><subject>Development 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a metabarcoding approach</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2014-04-01</date><risdate>2014</risdate><volume>9</volume><issue>4</issue><spage>e93740</spage><epage>e93740</epage><pages>e93740-e93740</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Plant diversification using cover crops may promote natural regulation of agricultural pests by supporting alternative prey that enable the increase of arthropod predator densities. However, the changes in the specific composition of predator diet induced by cover cropping are poorly understood. Here, we hypothesized that the cover crop can significantly alter the diet of predators in agroecosystems. The cover crop Brachiaria decumbens is increasingly used in banana plantations to control weeds and improve physical soil properties. In this paper, we used a DNA metabarcoding approach for the molecular analysis of the gut contents of predators (based on mini-COI) to identify 1) the DNA sequences of their prey, 2) the predators of Cosmopolites sordidus (a major pest of banana crops), and 3) the difference in the specific composition of predator diets between a bare soil plot (BSP) and a cover cropped plot (CCP) in a banana plantation. The earwig Euborellia caraibea, the carpenter ant Camponotus sexguttatus, and the fire ant Solenopsis geminata were found to contain C. sordidus DNA at frequencies ranging from 1 to 7%. While the frequencies of predators positive for C. sordidus DNA did not significantly differ between BSP and CCP, the frequency at which E. caraibea was positive for Diptera was 26% in BSP and 80% in CCP; the frequency at which C. sexguttatus was positive for Jalysus spinosus was 14% in BSP and 0% in CCP; and the frequency at which S. geminata was positive for Polytus mellerborgi was 21% in BSP and 3% in CCP. E. caraibea, C. sexguttatus and S. geminata were identified as possible biological agents for the regulation of C. sordidus. The detection of the diet changes of these predators when a cover crop is planted indicates the possible negative effects on pest regulation if predators switch to forage on alternative prey.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>24695585</pmid><doi>10.1371/journal.pone.0093740</doi><orcidid>https://orcid.org/0000-0002-7717-7555</orcidid><orcidid>https://orcid.org/0000-0001-9623-7691</orcidid><orcidid>https://orcid.org/0000-0001-9176-4476</orcidid><orcidid>https://orcid.org/0000-0002-6576-8067</orcidid><orcidid>https://orcid.org/0000-0003-2645-8098</orcidid><orcidid>https://orcid.org/0000-0001-5484-1970</orcidid><oa>free_for_read</oa></addata></record>
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1932-6203
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source Public Library of Science (PLoS) Journals Open Access; MEDLINE; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry
subjects Agricultural ecology
Agricultural ecosystems
Agricultural pests
Agricultural practices
Agricultural sciences
Analysis
Animal biology
Animals
Arthropods
Biodiversity
Biodiversity and Ecology
Biology and Life Sciences
Brachiaria decumbens
Camponotus sexguttatus
Cosmopolites sordidus
Cover crops
Crops
Crops, Agricultural
Deoxyribonucleic acid
Development Biology
Diet
DNA
Ecology
Ecology and Environmental Sciences
Eggs
Environmental Sciences
Euborellia caraibea
Food chains
Forage
Forages
Gene sequencing
Herbivores
Insect Control - methods
Insecta - physiology
Jalysus spinosus
Life Sciences
Musa
Musaceae
Nucleotide sequence
Organic farming
Pest Control, Biological - methods
Pests
Plantations
Polytus mellerborgi
Predators
Predatory Behavior - physiology
Prevention
Prey
Soil improvement
Soil properties
Solenopsis geminata
Trends
Weed control
title Cover cropping alters the diet of arthropods in a banana plantation: a metabarcoding approach
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