Open source software to control Bioflo bioreactors

Bioreactors are designed to support highly controlled environments for growth of tissues, cell cultures or microbial cultures. A variety of bioreactors are commercially available, often including sophisticated software to enhance the functionality of the bioreactor. However, experiments that the bio...

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Veröffentlicht in:PloS one 2014-03, Vol.9 (3), p.e92108-e92108
Hauptverfasser: Burdge, David A, Libourel, Igor G L
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Libourel, Igor G L
description Bioreactors are designed to support highly controlled environments for growth of tissues, cell cultures or microbial cultures. A variety of bioreactors are commercially available, often including sophisticated software to enhance the functionality of the bioreactor. However, experiments that the bioreactor hardware can support, but that were not envisioned during the software design cannot be performed without developing custom software. In addition, support for third party or custom designed auxiliary hardware is often sparse or absent. This work presents flexible open source freeware for the control of bioreactors of the Bioflo product family. The functionality of the software includes setpoint control, data logging, and protocol execution. Auxiliary hardware can be easily integrated and controlled through an integrated plugin interface without altering existing software. Simple experimental protocols can be entered as a CSV scripting file, and a Python-based protocol execution model is included for more demanding conditional experimental control. The software was designed to be a more flexible and free open source alternative to the commercially available solution. The source code and various auxiliary hardware plugins are publicly available for download from https://github.com/LibourelLab/BiofloSoftware. In addition to the source code, the software was compiled and packaged as a self-installing file for 32 and 64 bit windows operating systems. The compiled software will be able to control a Bioflo system, and will not require the installation of LabVIEW.
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subjects Access control
Automation
Backup software
Bioengineering
Biology and Life Sciences
Bioreactors
Biotechnology
Cell culture
Communication
Computer and Information Sciences
Computer programming
Computer programs
Control algorithms
Customization
Data logging
Downloading
Engineering and Technology
Fermentation
Freeware
Hardware
Logging
Microorganisms
Open source software
Operating systems
Personal computers
Programming Languages
Protocol (computers)
Researchers
Sensors
Software
Software Design
Source code
Stability
Tissues
title Open source software to control Bioflo bioreactors
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