Physical status of human papillomavirus integration in cervical cancer is associated with treatment outcome of the patients treated with radiotherapy
Integration of human papillomavirus (HPV) DNA into the host genome is a critical aetiological event in the progression from normal cervix to intraepithelial neoplasm, and finally to invasive cervical cancer. However, there has been little work on how HPV integration status relates to treatment outco...
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description | Integration of human papillomavirus (HPV) DNA into the host genome is a critical aetiological event in the progression from normal cervix to intraepithelial neoplasm, and finally to invasive cervical cancer. However, there has been little work on how HPV integration status relates to treatment outcome for cervical carcinomas. In the current study, HPV E2 and E6 gene copy numbers were measured in 111 cervical cancer tissues using real-time QPCR. Integration patterns were divided into four groups: single copy-integrated with episomal components (group 1), single copy-integrated without episomal components (group 2), multicopy tandem repetition-integrated (group 3), and low HPV (group 4) groups. A relapse-predicting model was constructed using multivariable Cox proportional hazards model to classify patients into different risk groups for disease-free survival (DFS). The model was internally validated using bootstrap resampling. Oligonucleotide microarray analysis was performed to evaluate gene expression patterns in relation to the different integration groups. DFS rate was inferior in the order of the patients in group 4, group 2/3, and group 1. Multivariate analysis showed that histologic grade, clinical stage group, and integration pattern were significant prognostic factors for poor DFS. The current prognostic model accurately predicted the risk of relapse, with an area under the receiver operating characteristic curve (AUC) of 0.74 (bootstrap corrected, 0.71). In conclusion, these data suggest that HPV integration pattern is a potent prognostic factor for tailored treatment of cervical cancer. |
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I.</contributor><creatorcontrib>Shin, Hye-Jin ; Joo, Jungnam ; Yoon, Ji Hyun ; Yoo, Chong Woo ; Kim, Joo-Young ; Lo, Anthony W. I.</creatorcontrib><description>Integration of human papillomavirus (HPV) DNA into the host genome is a critical aetiological event in the progression from normal cervix to intraepithelial neoplasm, and finally to invasive cervical cancer. However, there has been little work on how HPV integration status relates to treatment outcome for cervical carcinomas. In the current study, HPV E2 and E6 gene copy numbers were measured in 111 cervical cancer tissues using real-time QPCR. Integration patterns were divided into four groups: single copy-integrated with episomal components (group 1), single copy-integrated without episomal components (group 2), multicopy tandem repetition-integrated (group 3), and low HPV (group 4) groups. A relapse-predicting model was constructed using multivariable Cox proportional hazards model to classify patients into different risk groups for disease-free survival (DFS). The model was internally validated using bootstrap resampling. Oligonucleotide microarray analysis was performed to evaluate gene expression patterns in relation to the different integration groups. DFS rate was inferior in the order of the patients in group 4, group 2/3, and group 1. Multivariate analysis showed that histologic grade, clinical stage group, and integration pattern were significant prognostic factors for poor DFS. The current prognostic model accurately predicted the risk of relapse, with an area under the receiver operating characteristic curve (AUC) of 0.74 (bootstrap corrected, 0.71). In conclusion, these data suggest that HPV integration pattern is a potent prognostic factor for tailored treatment of cervical cancer.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0078995</identifier><identifier>PMID: 24427262</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Adult ; Aged ; Aged, 80 and over ; Alphapapillomavirus - classification ; Alphapapillomavirus - genetics ; Biology ; Cancer ; Cancer research ; Cancer treatment ; Care and treatment ; Cell adhesion & migration ; Cervical cancer ; Cervical carcinoma ; Clinical outcomes ; Cluster Analysis ; Deoxyribonucleic acid ; Development and progression ; DNA ; DNA microarrays ; E6 gene ; Female ; Gene Dosage ; Gene expression ; Gene Expression Profiling ; Genes ; Genomes ; Hazards ; Health risks ; Human papillomavirus ; Humans ; Infections ; Integration ; Invasiveness ; Medical prognosis ; Medical research ; Medicine ; Middle Aged ; Models, Statistical ; Multivariate analysis ; Neoplasia ; Neoplasm Grading ; Neoplasm Recurrence, Local ; Neoplasm Staging ; NMR ; Nuclear magnetic resonance ; Oligonucleotides ; Oncogene Proteins, Viral - genetics ; Papillomavirus ; Papillomavirus infections ; Papillomavirus Infections - complications ; Patient outcomes ; Patients ; Prognosis ; Quality ; Radiation therapy ; Radiotherapy ; Reproducibility of Results ; Resampling ; Risk Factors ; Risk groups ; Squamous cell carcinoma ; Statistical models ; Tissues ; Tomography ; Treatment Outcome ; Tumors ; Uterine Cervical Neoplasms - mortality ; Uterine Cervical Neoplasms - pathology ; Uterine Cervical Neoplasms - radiotherapy ; Uterine Cervical Neoplasms - virology ; Virus Integration</subject><ispartof>PloS one, 2014-01, Vol.9 (1), p.e78995-e78995</ispartof><rights>COPYRIGHT 2014 Public Library of Science</rights><rights>2014 Shin et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2014 Shin et al 2014 Shin et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c692t-725a2e1e70f2d500cd0aa721c13a2ba249d3b667b4ceeaa44c89fb6b2dcd2c0b3</citedby><cites>FETCH-LOGICAL-c692t-725a2e1e70f2d500cd0aa721c13a2ba249d3b667b4ceeaa44c89fb6b2dcd2c0b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3888442/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3888442/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2095,2914,23846,27903,27904,53769,53771,79346,79347</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24427262$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Lo, Anthony W. I.</contributor><creatorcontrib>Shin, Hye-Jin</creatorcontrib><creatorcontrib>Joo, Jungnam</creatorcontrib><creatorcontrib>Yoon, Ji Hyun</creatorcontrib><creatorcontrib>Yoo, Chong Woo</creatorcontrib><creatorcontrib>Kim, Joo-Young</creatorcontrib><title>Physical status of human papillomavirus integration in cervical cancer is associated with treatment outcome of the patients treated with radiotherapy</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Integration of human papillomavirus (HPV) DNA into the host genome is a critical aetiological event in the progression from normal cervix to intraepithelial neoplasm, and finally to invasive cervical cancer. However, there has been little work on how HPV integration status relates to treatment outcome for cervical carcinomas. In the current study, HPV E2 and E6 gene copy numbers were measured in 111 cervical cancer tissues using real-time QPCR. Integration patterns were divided into four groups: single copy-integrated with episomal components (group 1), single copy-integrated without episomal components (group 2), multicopy tandem repetition-integrated (group 3), and low HPV (group 4) groups. A relapse-predicting model was constructed using multivariable Cox proportional hazards model to classify patients into different risk groups for disease-free survival (DFS). The model was internally validated using bootstrap resampling. Oligonucleotide microarray analysis was performed to evaluate gene expression patterns in relation to the different integration groups. DFS rate was inferior in the order of the patients in group 4, group 2/3, and group 1. Multivariate analysis showed that histologic grade, clinical stage group, and integration pattern were significant prognostic factors for poor DFS. The current prognostic model accurately predicted the risk of relapse, with an area under the receiver operating characteristic curve (AUC) of 0.74 (bootstrap corrected, 0.71). In conclusion, these data suggest that HPV integration pattern is a potent prognostic factor for tailored treatment of cervical cancer.</description><subject>Adult</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Alphapapillomavirus - classification</subject><subject>Alphapapillomavirus - genetics</subject><subject>Biology</subject><subject>Cancer</subject><subject>Cancer research</subject><subject>Cancer treatment</subject><subject>Care and treatment</subject><subject>Cell adhesion & migration</subject><subject>Cervical cancer</subject><subject>Cervical carcinoma</subject><subject>Clinical outcomes</subject><subject>Cluster Analysis</subject><subject>Deoxyribonucleic acid</subject><subject>Development and progression</subject><subject>DNA</subject><subject>DNA microarrays</subject><subject>E6 gene</subject><subject>Female</subject><subject>Gene Dosage</subject><subject>Gene expression</subject><subject>Gene Expression Profiling</subject><subject>Genes</subject><subject>Genomes</subject><subject>Hazards</subject><subject>Health risks</subject><subject>Human papillomavirus</subject><subject>Humans</subject><subject>Infections</subject><subject>Integration</subject><subject>Invasiveness</subject><subject>Medical prognosis</subject><subject>Medical research</subject><subject>Medicine</subject><subject>Middle Aged</subject><subject>Models, Statistical</subject><subject>Multivariate analysis</subject><subject>Neoplasia</subject><subject>Neoplasm Grading</subject><subject>Neoplasm Recurrence, Local</subject><subject>Neoplasm Staging</subject><subject>NMR</subject><subject>Nuclear magnetic resonance</subject><subject>Oligonucleotides</subject><subject>Oncogene Proteins, Viral - 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I.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Physical status of human papillomavirus integration in cervical cancer is associated with treatment outcome of the patients treated with radiotherapy</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2014-01-10</date><risdate>2014</risdate><volume>9</volume><issue>1</issue><spage>e78995</spage><epage>e78995</epage><pages>e78995-e78995</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Integration of human papillomavirus (HPV) DNA into the host genome is a critical aetiological event in the progression from normal cervix to intraepithelial neoplasm, and finally to invasive cervical cancer. However, there has been little work on how HPV integration status relates to treatment outcome for cervical carcinomas. In the current study, HPV E2 and E6 gene copy numbers were measured in 111 cervical cancer tissues using real-time QPCR. Integration patterns were divided into four groups: single copy-integrated with episomal components (group 1), single copy-integrated without episomal components (group 2), multicopy tandem repetition-integrated (group 3), and low HPV (group 4) groups. A relapse-predicting model was constructed using multivariable Cox proportional hazards model to classify patients into different risk groups for disease-free survival (DFS). The model was internally validated using bootstrap resampling. Oligonucleotide microarray analysis was performed to evaluate gene expression patterns in relation to the different integration groups. DFS rate was inferior in the order of the patients in group 4, group 2/3, and group 1. Multivariate analysis showed that histologic grade, clinical stage group, and integration pattern were significant prognostic factors for poor DFS. The current prognostic model accurately predicted the risk of relapse, with an area under the receiver operating characteristic curve (AUC) of 0.74 (bootstrap corrected, 0.71). In conclusion, these data suggest that HPV integration pattern is a potent prognostic factor for tailored treatment of cervical cancer.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>24427262</pmid><doi>10.1371/journal.pone.0078995</doi><tpages>e78995</tpages><oa>free_for_read</oa></addata></record> |
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recordid | cdi_plos_journals_1476497462 |
source | MEDLINE; DOAJ Directory of Open Access Journals; Public Library of Science (PLoS); EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Adult Aged Aged, 80 and over Alphapapillomavirus - classification Alphapapillomavirus - genetics Biology Cancer Cancer research Cancer treatment Care and treatment Cell adhesion & migration Cervical cancer Cervical carcinoma Clinical outcomes Cluster Analysis Deoxyribonucleic acid Development and progression DNA DNA microarrays E6 gene Female Gene Dosage Gene expression Gene Expression Profiling Genes Genomes Hazards Health risks Human papillomavirus Humans Infections Integration Invasiveness Medical prognosis Medical research Medicine Middle Aged Models, Statistical Multivariate analysis Neoplasia Neoplasm Grading Neoplasm Recurrence, Local Neoplasm Staging NMR Nuclear magnetic resonance Oligonucleotides Oncogene Proteins, Viral - genetics Papillomavirus Papillomavirus infections Papillomavirus Infections - complications Patient outcomes Patients Prognosis Quality Radiation therapy Radiotherapy Reproducibility of Results Resampling Risk Factors Risk groups Squamous cell carcinoma Statistical models Tissues Tomography Treatment Outcome Tumors Uterine Cervical Neoplasms - mortality Uterine Cervical Neoplasms - pathology Uterine Cervical Neoplasms - radiotherapy Uterine Cervical Neoplasms - virology Virus Integration |
title | Physical status of human papillomavirus integration in cervical cancer is associated with treatment outcome of the patients treated with radiotherapy |
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