The PS1 hairpin of Mcm3 is essential for viability and for DNA unwinding in vitro

The pre-sensor 1 (PS1) hairpin is found in ring-shaped helicases of the AAA+ family (ATPases associated with a variety of cellular activities) of proteins and is implicated in DNA translocation during DNA unwinding of archaeal mini-chromosome maintenance (MCM) and superfamily 3 viral replicative hel...

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Veröffentlicht in:PloS one 2013-12, Vol.8 (12), p.e82177
Hauptverfasser: Lam, Simon K W, Ma, Xiaoli, Sing, Tina L, Shilton, Brian H, Brandl, Christopher J, Davey, Megan J
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Ma, Xiaoli
Sing, Tina L
Shilton, Brian H
Brandl, Christopher J
Davey, Megan J
description The pre-sensor 1 (PS1) hairpin is found in ring-shaped helicases of the AAA+ family (ATPases associated with a variety of cellular activities) of proteins and is implicated in DNA translocation during DNA unwinding of archaeal mini-chromosome maintenance (MCM) and superfamily 3 viral replicative helicases. To determine whether the PS1 hairpin is required for the function of the eukaryotic replicative helicase, Mcm2-7 (also comprised of AAA+ proteins), we mutated the conserved lysine residue in the putative PS1 hairpin motif in each of the Saccharomyces cerevisiae Mcm2-7 subunits to alanine. Interestingly, only the PS1 hairpin of Mcm3 was essential for viability. While mutation of the PS1 hairpin in the remaining MCM subunits resulted in minimal phenotypes, with the exception of Mcm7 which showed slow growth under all conditions examined, the viable alleles were synthetic lethal with each other. Reconstituted Mcm2-7 containing Mcm3 with the PS1 mutation (Mcm3(K499A)) had severely decreased helicase activity. The lack of helicase activity provides a probable explanation for the inviability of the mcm3(K499A) strain. The ATPase activity of Mcm2-7(3K499A) was similar to the wild type complex, but its interaction with single-stranded DNA in an electrophoretic mobility shift assay and its associations in cells were subtly altered. Together, these findings indicate that the PS1 hairpins in the Mcm2-7 subunits have important and distinct functions, most evident by the essential nature of the Mcm3 PS1 hairpin in DNA unwinding.
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To determine whether the PS1 hairpin is required for the function of the eukaryotic replicative helicase, Mcm2-7 (also comprised of AAA+ proteins), we mutated the conserved lysine residue in the putative PS1 hairpin motif in each of the Saccharomyces cerevisiae Mcm2-7 subunits to alanine. Interestingly, only the PS1 hairpin of Mcm3 was essential for viability. While mutation of the PS1 hairpin in the remaining MCM subunits resulted in minimal phenotypes, with the exception of Mcm7 which showed slow growth under all conditions examined, the viable alleles were synthetic lethal with each other. Reconstituted Mcm2-7 containing Mcm3 with the PS1 mutation (Mcm3(K499A)) had severely decreased helicase activity. The lack of helicase activity provides a probable explanation for the inviability of the mcm3(K499A) strain. The ATPase activity of Mcm2-7(3K499A) was similar to the wild type complex, but its interaction with single-stranded DNA in an electrophoretic mobility shift assay and its associations in cells were subtly altered. Together, these findings indicate that the PS1 hairpins in the Mcm2-7 subunits have important and distinct functions, most evident by the essential nature of the Mcm3 PS1 hairpin in DNA unwinding.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0082177</identifier><identifier>PMID: 24349215</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Adenosine triphosphatase ; Adenosine Triphosphatases - metabolism ; Alanine ; Alleles ; Amino Acid Motifs ; Amino Acid Sequence ; ATPases ; Biochemistry ; Cell growth ; Chromatography, Gel ; Crosses, Genetic ; Dentistry ; Deoxyribonucleic acid ; DNA ; DNA helicase ; DNA, Fungal - metabolism ; Electrophoretic mobility ; Kinases ; Lysine ; Medicine ; Microbial Viability - drug effects ; Minichromosome Maintenance Complex Component 3 - chemistry ; Minichromosome Maintenance Complex Component 3 - metabolism ; Models, Molecular ; Molecular Sequence Data ; Mutagens - toxicity ; Mutation ; Mutation - genetics ; Nucleic Acid Conformation ; Phenotype ; Plasmids ; Presenilin 1 ; Protein Binding - drug effects ; Protein Structure, Tertiary ; Protein Subunits - chemistry ; Protein Subunits - metabolism ; Proteins ; Saccharomyces cerevisiae ; Saccharomyces cerevisiae - cytology ; Saccharomyces cerevisiae - drug effects ; Saccharomyces cerevisiae - growth &amp; development ; Saccharomyces cerevisiae - metabolism ; Saccharomyces cerevisiae Proteins - chemistry ; Saccharomyces cerevisiae Proteins - metabolism ; Sensors ; Single-stranded DNA ; Structure-Activity Relationship ; Temperature ; Translocation ; Unwinding ; Viability ; Yeast</subject><ispartof>PloS one, 2013-12, Vol.8 (12), p.e82177</ispartof><rights>COPYRIGHT 2013 Public Library of Science</rights><rights>2013 Lam et al. 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To determine whether the PS1 hairpin is required for the function of the eukaryotic replicative helicase, Mcm2-7 (also comprised of AAA+ proteins), we mutated the conserved lysine residue in the putative PS1 hairpin motif in each of the Saccharomyces cerevisiae Mcm2-7 subunits to alanine. Interestingly, only the PS1 hairpin of Mcm3 was essential for viability. While mutation of the PS1 hairpin in the remaining MCM subunits resulted in minimal phenotypes, with the exception of Mcm7 which showed slow growth under all conditions examined, the viable alleles were synthetic lethal with each other. Reconstituted Mcm2-7 containing Mcm3 with the PS1 mutation (Mcm3(K499A)) had severely decreased helicase activity. The lack of helicase activity provides a probable explanation for the inviability of the mcm3(K499A) strain. The ATPase activity of Mcm2-7(3K499A) was similar to the wild type complex, but its interaction with single-stranded DNA in an electrophoretic mobility shift assay and its associations in cells were subtly altered. Together, these findings indicate that the PS1 hairpins in the Mcm2-7 subunits have important and distinct functions, most evident by the essential nature of the Mcm3 PS1 hairpin in DNA unwinding.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>24349215</pmid><doi>10.1371/journal.pone.0082177</doi><tpages>e82177</tpages><oa>free_for_read</oa></addata></record>
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subjects Adenosine triphosphatase
Adenosine Triphosphatases - metabolism
Alanine
Alleles
Amino Acid Motifs
Amino Acid Sequence
ATPases
Biochemistry
Cell growth
Chromatography, Gel
Crosses, Genetic
Dentistry
Deoxyribonucleic acid
DNA
DNA helicase
DNA, Fungal - metabolism
Electrophoretic mobility
Kinases
Lysine
Medicine
Microbial Viability - drug effects
Minichromosome Maintenance Complex Component 3 - chemistry
Minichromosome Maintenance Complex Component 3 - metabolism
Models, Molecular
Molecular Sequence Data
Mutagens - toxicity
Mutation
Mutation - genetics
Nucleic Acid Conformation
Phenotype
Plasmids
Presenilin 1
Protein Binding - drug effects
Protein Structure, Tertiary
Protein Subunits - chemistry
Protein Subunits - metabolism
Proteins
Saccharomyces cerevisiae
Saccharomyces cerevisiae - cytology
Saccharomyces cerevisiae - drug effects
Saccharomyces cerevisiae - growth & development
Saccharomyces cerevisiae - metabolism
Saccharomyces cerevisiae Proteins - chemistry
Saccharomyces cerevisiae Proteins - metabolism
Sensors
Single-stranded DNA
Structure-Activity Relationship
Temperature
Translocation
Unwinding
Viability
Yeast
title The PS1 hairpin of Mcm3 is essential for viability and for DNA unwinding in vitro
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