Structure reveals regulatory mechanisms of a MaoC-like hydratase from Phytophthora capsici involved in biosynthesis of polyhydroxyalkanoates (PHAs)

Polyhydroxyalkanoates (PHAs) have attracted increasing attention as "green plastic" due to their biodegradable, biocompatible, thermoplastic, and mechanical properties, and considerable research has been undertaken to develop low cost/high efficiency processes for the production of PHAs. M...

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Veröffentlicht in:PloS one 2013-11, Vol.8 (11), p.e80024-e80024
Hauptverfasser: Wang, Huizheng, Zhang, Kai, Zhu, Jie, Song, Weiwei, Zhao, Li, Zhang, Xiuguo
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Zhang, Kai
Zhu, Jie
Song, Weiwei
Zhao, Li
Zhang, Xiuguo
description Polyhydroxyalkanoates (PHAs) have attracted increasing attention as "green plastic" due to their biodegradable, biocompatible, thermoplastic, and mechanical properties, and considerable research has been undertaken to develop low cost/high efficiency processes for the production of PHAs. MaoC-like hydratase (MaoC), which belongs to (R)-hydratase involved in linking the β-oxidation and the PHA biosynthetic pathways, has been identified recently. Understanding the regulatory mechanisms of (R)-hydratase catalysis is critical for efficient production of PHAs that promise synthesis an environment-friendly plastic. We have determined the crystal structure of a new MaoC recognized from Phytophthora capsici. The crystal structure of the enzyme was solved at 2.00 Å resolution. The structure shows that MaoC has a canonical (R)-hydratase fold with an N-domain and a C-domain. Supporting its dimerization observed in structure, MaoC forms a stable homodimer in solution. Mutations that disrupt the dimeric MaoC result in a complete loss of activity toward crotonyl-CoA, indicating that dimerization is required for the enzymatic activity of MaoC. Importantly, structure comparison reveals that a loop unique to MaoC interacts with an α-helix that harbors the catalytic residues of MaoC. Deletion of the loop enhances the enzymatic activity of MaoC, suggesting its inhibitory role in regulating the activity of MaoC. The data in our study reveal the regulatory mechanism of an (R)-hydratase, providing information on enzyme engineering to produce low cost PHAs.
doi_str_mv 10.1371/journal.pone.0080024
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MaoC-like hydratase (MaoC), which belongs to (R)-hydratase involved in linking the β-oxidation and the PHA biosynthetic pathways, has been identified recently. Understanding the regulatory mechanisms of (R)-hydratase catalysis is critical for efficient production of PHAs that promise synthesis an environment-friendly plastic. We have determined the crystal structure of a new MaoC recognized from Phytophthora capsici. The crystal structure of the enzyme was solved at 2.00 Å resolution. The structure shows that MaoC has a canonical (R)-hydratase fold with an N-domain and a C-domain. Supporting its dimerization observed in structure, MaoC forms a stable homodimer in solution. Mutations that disrupt the dimeric MaoC result in a complete loss of activity toward crotonyl-CoA, indicating that dimerization is required for the enzymatic activity of MaoC. Importantly, structure comparison reveals that a loop unique to MaoC interacts with an α-helix that harbors the catalytic residues of MaoC. Deletion of the loop enhances the enzymatic activity of MaoC, suggesting its inhibitory role in regulating the activity of MaoC. The data in our study reveal the regulatory mechanism of an (R)-hydratase, providing information on enzyme engineering to produce low cost PHAs.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>24244597</pmid><doi>10.1371/journal.pone.0080024</doi><oa>free_for_read</oa></addata></record>
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subjects Acyl Coenzyme A - chemistry
Acyl Coenzyme A - metabolism
Amino Acid Sequence
Analysis
Atherosclerosis
Binding Sites
Biocatalysis
Biocompatibility
Biodegradability
Biodegradation
Biosynthesis
Candida tropicalis
Catalysis
Catalytic Domain
Chemical synthesis
Crystal structure
Crystallography, X-Ray
Dimerization
E coli
Enoyl-CoA Hydratase - chemistry
Enoyl-CoA Hydratase - genetics
Enoyl-CoA Hydratase - metabolism
Enzymatic activity
Enzymes
Escherichia coli
Escherichia coli - genetics
Escherichia coli - metabolism
Hydration
Low cost
Mechanical properties
Models, Molecular
Molecular Sequence Data
Mutation
Oxidation
Oxidation-Reduction
Phytophthora - chemistry
Phytophthora - enzymology
Phytophthora capsici
Plant pathology
Plastics
Polyhydroxyalkanoates
Polyhydroxyalkanoates - biosynthesis
Protein Multimerization
Protein Structure, Secondary
Protein Structure, Tertiary
Proteins
Recombinant Proteins - chemistry
Recombinant Proteins - genetics
Recombinant Proteins - metabolism
Regulatory mechanisms (biology)
Sequence Alignment
Sequence Homology, Amino Acid
Substrate Specificity
Thermoplastics
title Structure reveals regulatory mechanisms of a MaoC-like hydratase from Phytophthora capsici involved in biosynthesis of polyhydroxyalkanoates (PHAs)
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