Odoriferous Defensive stink gland transcriptome to identify novel genes necessary for quinone synthesis in the red flour beetle, Tribolium castaneum
Chemical defense is one of the most important traits, which endow insects the ability to conquer a most diverse set of ecological environments. Chemical secretions are used for defense against anything from vertebrate or invertebrate predators to prokaryotic or eukaryotic parasites or food competito...
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description | Chemical defense is one of the most important traits, which endow insects the ability to conquer a most diverse set of ecological environments. Chemical secretions are used for defense against anything from vertebrate or invertebrate predators to prokaryotic or eukaryotic parasites or food competitors. Tenebrionid beetles are especially prolific in this category, producing several varieties of substituted benzoquinone compounds. In order to get a better understanding of the genetic and molecular basis of defensive secretions, we performed RNA sequencing in a newly emerging insect model, the red flour beetle Tribolium castaneum (Coleoptera: Tenebrionidae). To detect genes that are highly and specifically expressed in the odoriferous gland tissues that secret defensive chemical compounds, we compared them to a control tissue, the anterior abdomen. 511 genes were identified in different subtraction groups. Of these, 77 genes were functionally analyzed by RNA interference (RNAi) to recognize induced gland alterations morphologically or changes in gland volatiles by gas chromatography-mass spectrometry. 29 genes (38%) presented strong visible phenotypes, while 67 genes (87%) showed alterations of at least one gland content. Three of these genes showing quinone-less (ql) phenotypes - Tcas-ql VTGl; Tcas-ql ARSB; Tcas-ql MRP - were isolated, molecularly characterized, their expression identified in both types of the secretory glandular cells, and their function determined by quantification of all main components after RNAi. In addition, microbe inhibition assays revealed that a quinone-free status is unable to impede bacterial or fungal growth. Phylogenetic analyses of these three genes indicate that they have evolved independently and specifically for chemical defense in beetles. |
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Chemical secretions are used for defense against anything from vertebrate or invertebrate predators to prokaryotic or eukaryotic parasites or food competitors. Tenebrionid beetles are especially prolific in this category, producing several varieties of substituted benzoquinone compounds. In order to get a better understanding of the genetic and molecular basis of defensive secretions, we performed RNA sequencing in a newly emerging insect model, the red flour beetle Tribolium castaneum (Coleoptera: Tenebrionidae). To detect genes that are highly and specifically expressed in the odoriferous gland tissues that secret defensive chemical compounds, we compared them to a control tissue, the anterior abdomen. 511 genes were identified in different subtraction groups. Of these, 77 genes were functionally analyzed by RNA interference (RNAi) to recognize induced gland alterations morphologically or changes in gland volatiles by gas chromatography-mass spectrometry. 29 genes (38%) presented strong visible phenotypes, while 67 genes (87%) showed alterations of at least one gland content. Three of these genes showing quinone-less (ql) phenotypes - Tcas-ql VTGl; Tcas-ql ARSB; Tcas-ql MRP - were isolated, molecularly characterized, their expression identified in both types of the secretory glandular cells, and their function determined by quantification of all main components after RNAi. In addition, microbe inhibition assays revealed that a quinone-free status is unable to impede bacterial or fungal growth. Phylogenetic analyses of these three genes indicate that they have evolved independently and specifically for chemical defense in beetles.</description><identifier>ISSN: 1553-7404</identifier><identifier>ISSN: 1553-7390</identifier><identifier>EISSN: 1553-7404</identifier><identifier>DOI: 10.1371/journal.pgen.1003596</identifier><identifier>PMID: 23874211</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Abdomen ; Agriculture ; Animals ; Beetles ; Benzoquinones - chemistry ; Benzoquinones - metabolism ; Biology ; Biosynthesis ; Chromatography ; Cloning ; Coleoptera - chemistry ; Coleoptera - metabolism ; Coleoptera - physiology ; Gene Expression Profiling ; Genes ; Genetic aspects ; Genetic transcription ; Genomes ; High-Throughput Nucleotide Sequencing ; Insect Proteins - genetics ; Insect Proteins - metabolism ; Insects ; Mass spectrometry ; Phylogeny ; Physiological aspects ; Quinone ; RNA Interference ; Scent Glands - chemistry ; Scent Glands - metabolism ; Statistical methods</subject><ispartof>PLoS genetics, 2013-07, Vol.9 (7), p.e1003596-e1003596</ispartof><rights>COPYRIGHT 2013 Public Library of Science</rights><rights>2013 Li et al 2013 Li et al</rights><rights>2013 Li et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Li J, Lehmann S, Weißbecker B, Ojeda Naharros I, Schütz S, et al. (2013) Odoriferous Defensive Stink Gland Transcriptome to Identify Novel Genes Necessary for Quinone Synthesis in the Red Flour Beetle, Tribolium castaneum. PLoS Genet 9(7): e1003596. doi:10.1371/journal.pgen.1003596</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c698t-deccb5826358b204be5ad9e7b3c4c5a03effd6e4e4a711d92ad576de8d2bbf423</citedby><cites>FETCH-LOGICAL-c698t-deccb5826358b204be5ad9e7b3c4c5a03effd6e4e4a711d92ad576de8d2bbf423</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3708791/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3708791/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79342,79343</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23874211$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Jianwei</creatorcontrib><creatorcontrib>Lehmann, Sabrina</creatorcontrib><creatorcontrib>Weißbecker, Bernhard</creatorcontrib><creatorcontrib>Ojeda Naharros, Irene</creatorcontrib><creatorcontrib>Schütz, Stefan</creatorcontrib><creatorcontrib>Joop, Gerrit</creatorcontrib><creatorcontrib>Wimmer, Ernst A</creatorcontrib><title>Odoriferous Defensive stink gland transcriptome to identify novel genes necessary for quinone synthesis in the red flour beetle, Tribolium castaneum</title><title>PLoS genetics</title><addtitle>PLoS Genet</addtitle><description>Chemical defense is one of the most important traits, which endow insects the ability to conquer a most diverse set of ecological environments. Chemical secretions are used for defense against anything from vertebrate or invertebrate predators to prokaryotic or eukaryotic parasites or food competitors. Tenebrionid beetles are especially prolific in this category, producing several varieties of substituted benzoquinone compounds. In order to get a better understanding of the genetic and molecular basis of defensive secretions, we performed RNA sequencing in a newly emerging insect model, the red flour beetle Tribolium castaneum (Coleoptera: Tenebrionidae). To detect genes that are highly and specifically expressed in the odoriferous gland tissues that secret defensive chemical compounds, we compared them to a control tissue, the anterior abdomen. 511 genes were identified in different subtraction groups. Of these, 77 genes were functionally analyzed by RNA interference (RNAi) to recognize induced gland alterations morphologically or changes in gland volatiles by gas chromatography-mass spectrometry. 29 genes (38%) presented strong visible phenotypes, while 67 genes (87%) showed alterations of at least one gland content. Three of these genes showing quinone-less (ql) phenotypes - Tcas-ql VTGl; Tcas-ql ARSB; Tcas-ql MRP - were isolated, molecularly characterized, their expression identified in both types of the secretory glandular cells, and their function determined by quantification of all main components after RNAi. In addition, microbe inhibition assays revealed that a quinone-free status is unable to impede bacterial or fungal growth. Phylogenetic analyses of these three genes indicate that they have evolved independently and specifically for chemical defense in beetles.</description><subject>Abdomen</subject><subject>Agriculture</subject><subject>Animals</subject><subject>Beetles</subject><subject>Benzoquinones - chemistry</subject><subject>Benzoquinones - metabolism</subject><subject>Biology</subject><subject>Biosynthesis</subject><subject>Chromatography</subject><subject>Cloning</subject><subject>Coleoptera - chemistry</subject><subject>Coleoptera - metabolism</subject><subject>Coleoptera - physiology</subject><subject>Gene Expression Profiling</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genetic transcription</subject><subject>Genomes</subject><subject>High-Throughput Nucleotide Sequencing</subject><subject>Insect Proteins - genetics</subject><subject>Insect Proteins - metabolism</subject><subject>Insects</subject><subject>Mass spectrometry</subject><subject>Phylogeny</subject><subject>Physiological aspects</subject><subject>Quinone</subject><subject>RNA Interference</subject><subject>Scent Glands - chemistry</subject><subject>Scent Glands - metabolism</subject><subject>Statistical methods</subject><issn>1553-7404</issn><issn>1553-7390</issn><issn>1553-7404</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>DOA</sourceid><recordid>eNqVk99qFDEUxgdRbK2-gWigIAruOplkJjM3Qqn_CsWCVm9DJjmZTc0k2ySzuO_hA5t1t6ULXii5SEh-5zsn5-MUxVNczjFh-M2Vn4ITdr4cwM1xWZK6a-4Vh7iuyYzRkt6_cz4oHsV4tWHajj0sDirSMlphfFj8ulA-GA3BTxG9Aw0umhWgmIz7gQYrnEIpCBdlMMvkR0DJI6PAJaPXyPkVWJTzQ0QOJMQowhppH9D1ZJx3WWft0gKiicg4lE8ogELa5tJRD5AsvEaXwfTemmlEUsQkHEzj4-KBFjbCk91-VHz78P7y9NPs_OLj2enJ-Uw2XZtmCqTs67Zq8rf6qqQ91EJ1wHoiqaxFSUBr1QAFKhjGqquEqlmjoFVV32takaPi-VZ3aX3ku4ZGjikpWdtQVmbibEsoL674Mpgx_5B7YfifCx8GLkIy0gKve1mJrhM9xbnlGIQmuQpFoGW9wkxmrbe7bFM_gpK5iUHYPdH9F2cWfPArTljZsg5ngZc7geCvJ4iJjyZKsNklyPblujFuCGk7ktHjLTqIXJpx2mdFucH5CaG4aqqqaTI1_wuVl4LRyOyfNvl-L-DVXkBmEvxMg5hi5Gdfv_wH-_nf2Yvv--yLO-wChE2L6O2UjHdxH6RbUAYfYwB922pc8s0I3TjONyPEdyOUw57dtek26GZmyG_cShr4</recordid><startdate>20130701</startdate><enddate>20130701</enddate><creator>Li, Jianwei</creator><creator>Lehmann, Sabrina</creator><creator>Weißbecker, Bernhard</creator><creator>Ojeda Naharros, Irene</creator><creator>Schütz, Stefan</creator><creator>Joop, Gerrit</creator><creator>Wimmer, Ernst A</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISN</scope><scope>ISR</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20130701</creationdate><title>Odoriferous Defensive stink gland transcriptome to identify novel genes necessary for quinone synthesis in the red flour beetle, Tribolium castaneum</title><author>Li, Jianwei ; Lehmann, Sabrina ; Weißbecker, Bernhard ; Ojeda Naharros, Irene ; Schütz, Stefan ; Joop, Gerrit ; Wimmer, Ernst A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c698t-deccb5826358b204be5ad9e7b3c4c5a03effd6e4e4a711d92ad576de8d2bbf423</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Abdomen</topic><topic>Agriculture</topic><topic>Animals</topic><topic>Beetles</topic><topic>Benzoquinones - chemistry</topic><topic>Benzoquinones - metabolism</topic><topic>Biology</topic><topic>Biosynthesis</topic><topic>Chromatography</topic><topic>Cloning</topic><topic>Coleoptera - chemistry</topic><topic>Coleoptera - metabolism</topic><topic>Coleoptera - physiology</topic><topic>Gene Expression Profiling</topic><topic>Genes</topic><topic>Genetic aspects</topic><topic>Genetic transcription</topic><topic>Genomes</topic><topic>High-Throughput Nucleotide Sequencing</topic><topic>Insect Proteins - genetics</topic><topic>Insect Proteins - metabolism</topic><topic>Insects</topic><topic>Mass spectrometry</topic><topic>Phylogeny</topic><topic>Physiological aspects</topic><topic>Quinone</topic><topic>RNA Interference</topic><topic>Scent Glands - chemistry</topic><topic>Scent Glands - metabolism</topic><topic>Statistical methods</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Jianwei</creatorcontrib><creatorcontrib>Lehmann, Sabrina</creatorcontrib><creatorcontrib>Weißbecker, Bernhard</creatorcontrib><creatorcontrib>Ojeda Naharros, Irene</creatorcontrib><creatorcontrib>Schütz, Stefan</creatorcontrib><creatorcontrib>Joop, Gerrit</creatorcontrib><creatorcontrib>Wimmer, Ernst A</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Opposing Viewpoints</collection><collection>Gale In Context: Canada</collection><collection>Gale in Context: Science</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PLoS genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Li, Jianwei</au><au>Lehmann, Sabrina</au><au>Weißbecker, Bernhard</au><au>Ojeda Naharros, Irene</au><au>Schütz, Stefan</au><au>Joop, Gerrit</au><au>Wimmer, Ernst A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Odoriferous Defensive stink gland transcriptome to identify novel genes necessary for quinone synthesis in the red flour beetle, Tribolium castaneum</atitle><jtitle>PLoS genetics</jtitle><addtitle>PLoS Genet</addtitle><date>2013-07-01</date><risdate>2013</risdate><volume>9</volume><issue>7</issue><spage>e1003596</spage><epage>e1003596</epage><pages>e1003596-e1003596</pages><issn>1553-7404</issn><issn>1553-7390</issn><eissn>1553-7404</eissn><abstract>Chemical defense is one of the most important traits, which endow insects the ability to conquer a most diverse set of ecological environments. Chemical secretions are used for defense against anything from vertebrate or invertebrate predators to prokaryotic or eukaryotic parasites or food competitors. Tenebrionid beetles are especially prolific in this category, producing several varieties of substituted benzoquinone compounds. In order to get a better understanding of the genetic and molecular basis of defensive secretions, we performed RNA sequencing in a newly emerging insect model, the red flour beetle Tribolium castaneum (Coleoptera: Tenebrionidae). To detect genes that are highly and specifically expressed in the odoriferous gland tissues that secret defensive chemical compounds, we compared them to a control tissue, the anterior abdomen. 511 genes were identified in different subtraction groups. Of these, 77 genes were functionally analyzed by RNA interference (RNAi) to recognize induced gland alterations morphologically or changes in gland volatiles by gas chromatography-mass spectrometry. 29 genes (38%) presented strong visible phenotypes, while 67 genes (87%) showed alterations of at least one gland content. Three of these genes showing quinone-less (ql) phenotypes - Tcas-ql VTGl; Tcas-ql ARSB; Tcas-ql MRP - were isolated, molecularly characterized, their expression identified in both types of the secretory glandular cells, and their function determined by quantification of all main components after RNAi. In addition, microbe inhibition assays revealed that a quinone-free status is unable to impede bacterial or fungal growth. Phylogenetic analyses of these three genes indicate that they have evolved independently and specifically for chemical defense in beetles.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>23874211</pmid><doi>10.1371/journal.pgen.1003596</doi><oa>free_for_read</oa></addata></record> |
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subjects | Abdomen Agriculture Animals Beetles Benzoquinones - chemistry Benzoquinones - metabolism Biology Biosynthesis Chromatography Cloning Coleoptera - chemistry Coleoptera - metabolism Coleoptera - physiology Gene Expression Profiling Genes Genetic aspects Genetic transcription Genomes High-Throughput Nucleotide Sequencing Insect Proteins - genetics Insect Proteins - metabolism Insects Mass spectrometry Phylogeny Physiological aspects Quinone RNA Interference Scent Glands - chemistry Scent Glands - metabolism Statistical methods |
title | Odoriferous Defensive stink gland transcriptome to identify novel genes necessary for quinone synthesis in the red flour beetle, Tribolium castaneum |
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