Quantifying species diversity with a DNA barcoding-based method: Tibetan moth species (Noctuidae) on the Qinghai-Tibetan Plateau

With the ongoing loss of biodiversity, there is a great need for fast and effective ways to assess species richness and diversity: DNA barcoding provides a powerful new tool for this. We investigated this approach by focusing on the Tibetan plateau, which is one of the world's top biodiversity...

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Veröffentlicht in:PloS one 2013-05, Vol.8 (5), p.e64428-e64428
Hauptverfasser: Jin, Qian, Han, Huilin, Hu, XiMin, Li, XinHai, Zhu, ChaoDong, Ho, Simon Y W, Ward, Robert D, Zhang, Ai-bing
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container_title PloS one
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creator Jin, Qian
Han, Huilin
Hu, XiMin
Li, XinHai
Zhu, ChaoDong
Ho, Simon Y W
Ward, Robert D
Zhang, Ai-bing
description With the ongoing loss of biodiversity, there is a great need for fast and effective ways to assess species richness and diversity: DNA barcoding provides a powerful new tool for this. We investigated this approach by focusing on the Tibetan plateau, which is one of the world's top biodiversity hotspots. There have been few studies of its invertebrates, although they constitute the vast majority of the region's diversity. Here we investigated species diversity of the lepidopteran family Noctuidae, across different environmental gradients, using measurements based on traditional morphology as well as on DNA barcoding. The COI barcode showed an average interspecific K2P distance of 9.45±2.08%, which is about four times larger than the mean intraspecific distance (1.85±3.20%). Using six diversity indices, we did not detect any significant differences in estimated species diversity between measurements based on traditional morphology and on DNA barcoding. Furthermore, we found strong positive correlations between them, indicating that barcode-based measures of species diversity can serve as a good surrogate for morphology-based measures in most situations tested. Eastern communities were found to have significantly higher diversity than Western ones. Among 22 environmental factors tested, we found that three (precipitation of driest month, precipitation of driest quarter, and precipitation of coldest quarter) were significantly correlated with species diversity. Our results indicate that these factors could be the key ecological factors influencing the species diversity of the lepidopteran family Noctuidae on the Tibetan plateau.
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Here we investigated species diversity of the lepidopteran family Noctuidae, across different environmental gradients, using measurements based on traditional morphology as well as on DNA barcoding. The COI barcode showed an average interspecific K2P distance of 9.45±2.08%, which is about four times larger than the mean intraspecific distance (1.85±3.20%). Using six diversity indices, we did not detect any significant differences in estimated species diversity between measurements based on traditional morphology and on DNA barcoding. Furthermore, we found strong positive correlations between them, indicating that barcode-based measures of species diversity can serve as a good surrogate for morphology-based measures in most situations tested. Eastern communities were found to have significantly higher diversity than Western ones. Among 22 environmental factors tested, we found that three (precipitation of driest month, precipitation of driest quarter, and precipitation of coldest quarter) were significantly correlated with species diversity. Our results indicate that these factors could be the key ecological factors influencing the species diversity of the lepidopteran family Noctuidae on the Tibetan plateau.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>23741330</pmid><doi>10.1371/journal.pone.0064428</doi><oa>free_for_read</oa></addata></record>
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source PubMed Central Free; MEDLINE; DOAJ Directory of Open Access Journals; Public Library of Science (PLoS) Journals Open Access; EZB-FREE-00999 freely available EZB journals; Free Full-Text Journals in Chemistry
subjects Agricultural production
Animals
Apamea
Arthropoda
Arthropods
Bayes Theorem
Biodiversity
Biodiversity hot spots
Biodiversity loss
Biology
Butterflies & moths
Deoxyribonucleic acid
Diversity indices
DNA
DNA Barcoding, Taxonomic - methods
Ecological effects
Ecology
Electron Transport Complex IV - classification
Electron Transport Complex IV - genetics
Environmental factors
Environmental testing
Evolutionary biology
Female
Forestry
Gene sequencing
Humidity
Identification
Integrated software
Interspecific
Invertebrates
Laboratories
Life sciences
Male
Methods
Morphology
Moths - anatomy & histology
Moths - classification
Moths - genetics
Noctuidae
Phylogenetics
Phylogeny
Precipitation
Principal components analysis
Seasons
Species diversity
Species richness
Studies
Tibet
Zoology
title Quantifying species diversity with a DNA barcoding-based method: Tibetan moth species (Noctuidae) on the Qinghai-Tibetan Plateau
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