dRYBP contributes to the negative regulation of the Drosophila Imd pathway
The Drosophila humoral innate immune response fights infection by producing antimicrobial peptides (AMPs) through the microbe-specific activation of the Toll or the Imd signaling pathway. Upon systemic infection, the production of AMPs is both positively and negatively regulated to reach a balanced...
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description | The Drosophila humoral innate immune response fights infection by producing antimicrobial peptides (AMPs) through the microbe-specific activation of the Toll or the Imd signaling pathway. Upon systemic infection, the production of AMPs is both positively and negatively regulated to reach a balanced immune response required for survival. Here, we report the function of the dRYBP (drosophila Ring and YY1 Binding Protein) protein, which contains a ubiquitin-binding domain, in the Imd pathway. We have found that dRYBP contributes to the negative regulation of AMP production: upon systemic infection with Gram-negative bacteria, Diptericin expression is up-regulated in the absence of dRYBP and down-regulated in the presence of high levels of dRYBP. Epistatic analyses using gain and loss of function alleles of imd, Relish, or skpA and dRYBP suggest that dRYBP functions upstream or together with SKPA, a member of the SCF-E3-ubiquitin ligase complex, to repress the Imd signaling cascade. We propose that the role of dRYBP in the regulation of the Imd signaling pathway is to function as a ubiquitin adaptor protein together with SKPA to promote SCF-dependent proteasomal degradation of Relish. Beyond the identification of dRYBP as a novel component of Imd pathway regulation, our results also suggest that the evolutionarily conserved RYBP protein may be involved in the human innate immune response. |
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Upon systemic infection, the production of AMPs is both positively and negatively regulated to reach a balanced immune response required for survival. Here, we report the function of the dRYBP (drosophila Ring and YY1 Binding Protein) protein, which contains a ubiquitin-binding domain, in the Imd pathway. We have found that dRYBP contributes to the negative regulation of AMP production: upon systemic infection with Gram-negative bacteria, Diptericin expression is up-regulated in the absence of dRYBP and down-regulated in the presence of high levels of dRYBP. Epistatic analyses using gain and loss of function alleles of imd, Relish, or skpA and dRYBP suggest that dRYBP functions upstream or together with SKPA, a member of the SCF-E3-ubiquitin ligase complex, to repress the Imd signaling cascade. We propose that the role of dRYBP in the regulation of the Imd signaling pathway is to function as a ubiquitin adaptor protein together with SKPA to promote SCF-dependent proteasomal degradation of Relish. Beyond the identification of dRYBP as a novel component of Imd pathway regulation, our results also suggest that the evolutionarily conserved RYBP protein may be involved in the human innate immune response.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0062052</identifier><identifier>PMID: 23596533</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Adenosine Monophosphate - biosynthesis ; Animals ; Animals, Genetically Modified ; Antimicrobial peptides ; Apoptosis ; Bacteria ; Bacterial infections ; Binding ; Biodegradation ; Biology ; Cell Nucleus - metabolism ; Disseminated infection ; Down-regulation ; Drosophila ; Drosophila - genetics ; Drosophila - immunology ; Drosophila - metabolism ; Drosophila Proteins - deficiency ; Drosophila Proteins - genetics ; Drosophila Proteins - metabolism ; E coli ; Epistasis ; Epistasis, Genetic ; Fat Body - cytology ; Fat Body - metabolism ; Female ; Gene Expression ; Genomes ; Gram-negative bacteria ; Health aspects ; Human behavior ; Immune response ; Immune response (humoral) ; Immune system ; Infection ; Infections ; Innate immunity ; Insects ; Kinases ; Life sciences ; Male ; Mutation ; Peptides ; Proteasomes ; Protein binding ; Proteins ; Regulations ; Repressor Proteins - deficiency ; Repressor Proteins - genetics ; Repressor Proteins - metabolism ; Signal Transduction ; Signaling ; Ubiquitin ; Ubiquitin-protein ligase ; YY1 protein</subject><ispartof>PloS one, 2013-04, Vol.8 (4), p.e62052-e62052</ispartof><rights>COPYRIGHT 2013 Public Library of Science</rights><rights>2013 Aparicio et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2013 Aparicio et al 2013 Aparicio et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c758t-1e9ac7956d56275aa25c616f4351790d28eedee36b5599a355d3a6f4e0577b963</citedby><cites>FETCH-LOGICAL-c758t-1e9ac7956d56275aa25c616f4351790d28eedee36b5599a355d3a6f4e0577b963</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3626645/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3626645/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79569,79570</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23596533$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Aparicio, Ricardo</creatorcontrib><creatorcontrib>Neyen, Claudine</creatorcontrib><creatorcontrib>Lemaitre, Bruno</creatorcontrib><creatorcontrib>Busturia, Ana</creatorcontrib><title>dRYBP contributes to the negative regulation of the Drosophila Imd pathway</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>The Drosophila humoral innate immune response fights infection by producing antimicrobial peptides (AMPs) through the microbe-specific activation of the Toll or the Imd signaling pathway. Upon systemic infection, the production of AMPs is both positively and negatively regulated to reach a balanced immune response required for survival. Here, we report the function of the dRYBP (drosophila Ring and YY1 Binding Protein) protein, which contains a ubiquitin-binding domain, in the Imd pathway. We have found that dRYBP contributes to the negative regulation of AMP production: upon systemic infection with Gram-negative bacteria, Diptericin expression is up-regulated in the absence of dRYBP and down-regulated in the presence of high levels of dRYBP. Epistatic analyses using gain and loss of function alleles of imd, Relish, or skpA and dRYBP suggest that dRYBP functions upstream or together with SKPA, a member of the SCF-E3-ubiquitin ligase complex, to repress the Imd signaling cascade. We propose that the role of dRYBP in the regulation of the Imd signaling pathway is to function as a ubiquitin adaptor protein together with SKPA to promote SCF-dependent proteasomal degradation of Relish. Beyond the identification of dRYBP as a novel component of Imd pathway regulation, our results also suggest that the evolutionarily conserved RYBP protein may be involved in the human innate immune response.</description><subject>Adenosine Monophosphate - biosynthesis</subject><subject>Animals</subject><subject>Animals, Genetically Modified</subject><subject>Antimicrobial peptides</subject><subject>Apoptosis</subject><subject>Bacteria</subject><subject>Bacterial infections</subject><subject>Binding</subject><subject>Biodegradation</subject><subject>Biology</subject><subject>Cell Nucleus - metabolism</subject><subject>Disseminated infection</subject><subject>Down-regulation</subject><subject>Drosophila</subject><subject>Drosophila - genetics</subject><subject>Drosophila - immunology</subject><subject>Drosophila - metabolism</subject><subject>Drosophila Proteins - deficiency</subject><subject>Drosophila Proteins - genetics</subject><subject>Drosophila Proteins - metabolism</subject><subject>E coli</subject><subject>Epistasis</subject><subject>Epistasis, Genetic</subject><subject>Fat Body - cytology</subject><subject>Fat Body - metabolism</subject><subject>Female</subject><subject>Gene Expression</subject><subject>Genomes</subject><subject>Gram-negative bacteria</subject><subject>Health aspects</subject><subject>Human behavior</subject><subject>Immune response</subject><subject>Immune response (humoral)</subject><subject>Immune system</subject><subject>Infection</subject><subject>Infections</subject><subject>Innate immunity</subject><subject>Insects</subject><subject>Kinases</subject><subject>Life sciences</subject><subject>Male</subject><subject>Mutation</subject><subject>Peptides</subject><subject>Proteasomes</subject><subject>Protein binding</subject><subject>Proteins</subject><subject>Regulations</subject><subject>Repressor Proteins - deficiency</subject><subject>Repressor Proteins - genetics</subject><subject>Repressor Proteins - metabolism</subject><subject>Signal Transduction</subject><subject>Signaling</subject><subject>Ubiquitin</subject><subject>Ubiquitin-protein ligase</subject><subject>YY1 protein</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNqNkluL1DAUx4so7kW_gWhBEH2YMZcmaV8W1vU2srCyXsCnkElP2wyZZmzSXffbm850l6nsgwSaNOd3_jk5-SfJM4zmmAr8duX6rlV2vnEtzBHiBDHyIDnEBSWz-EMf7q0PkiPvVwgxmnP-ODkglBWcUXqYfCkvf737mmrXhs4s-wA-DS4NDaQt1CqYK0g7qHsbl65NXbUNve-cd5vGWJUu1mW6UaG5VjdPkkeVsh6ejvNx8uPjh-9nn2fnF58WZ6fnMy1YHmYYCqVFwXjJOBFMKcI0x7zKKMOiQCXJAUoAypeMFYWijJVUxTAgJsSy4PQ4ebHT3Vjn5dgGLzGlLLaAChGJxY4onVrJTWfWqruRThm53XBdLVUXjLYgEUY55AUtMF1mnLA8I7lGdPjEAnUetU7G0_rlGkoNsVHKTkSnkdY0snZXknLCecaiwOtRoHO_e_BBro3XYK1qwfXbumMNHDMc0Zf_oPffbqRqFS9g2srFc_UgKk8zkRNBWDZQ83uoOEpYm_jcUJm4P0l4M0kYLAF_Qq167-Xi2-X_sxc_p-yrPbYBZUPjne0HQ_kpmO1AHe3lO6jumoyRHCx_2w05WF6Olo9pz_cf6C7p1uP0L5tx-OE</recordid><startdate>20130415</startdate><enddate>20130415</enddate><creator>Aparicio, Ricardo</creator><creator>Neyen, Claudine</creator><creator>Lemaitre, Bruno</creator><creator>Busturia, Ana</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PHGZM</scope><scope>PHGZT</scope><scope>PIMPY</scope><scope>PJZUB</scope><scope>PKEHL</scope><scope>PPXIY</scope><scope>PQEST</scope><scope>PQGLB</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20130415</creationdate><title>dRYBP contributes to the negative regulation of the Drosophila Imd pathway</title><author>Aparicio, Ricardo ; Neyen, Claudine ; Lemaitre, Bruno ; Busturia, Ana</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c758t-1e9ac7956d56275aa25c616f4351790d28eedee36b5599a355d3a6f4e0577b963</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Adenosine Monophosphate - biosynthesis</topic><topic>Animals</topic><topic>Animals, Genetically Modified</topic><topic>Antimicrobial peptides</topic><topic>Apoptosis</topic><topic>Bacteria</topic><topic>Bacterial infections</topic><topic>Binding</topic><topic>Biodegradation</topic><topic>Biology</topic><topic>Cell Nucleus - metabolism</topic><topic>Disseminated infection</topic><topic>Down-regulation</topic><topic>Drosophila</topic><topic>Drosophila - genetics</topic><topic>Drosophila - immunology</topic><topic>Drosophila - metabolism</topic><topic>Drosophila Proteins - deficiency</topic><topic>Drosophila Proteins - genetics</topic><topic>Drosophila Proteins - metabolism</topic><topic>E coli</topic><topic>Epistasis</topic><topic>Epistasis, Genetic</topic><topic>Fat Body - cytology</topic><topic>Fat Body - metabolism</topic><topic>Female</topic><topic>Gene Expression</topic><topic>Genomes</topic><topic>Gram-negative bacteria</topic><topic>Health aspects</topic><topic>Human behavior</topic><topic>Immune response</topic><topic>Immune response (humoral)</topic><topic>Immune system</topic><topic>Infection</topic><topic>Infections</topic><topic>Innate immunity</topic><topic>Insects</topic><topic>Kinases</topic><topic>Life sciences</topic><topic>Male</topic><topic>Mutation</topic><topic>Peptides</topic><topic>Proteasomes</topic><topic>Protein binding</topic><topic>Proteins</topic><topic>Regulations</topic><topic>Repressor Proteins - deficiency</topic><topic>Repressor Proteins - genetics</topic><topic>Repressor Proteins - metabolism</topic><topic>Signal Transduction</topic><topic>Signaling</topic><topic>Ubiquitin</topic><topic>Ubiquitin-protein ligase</topic><topic>YY1 protein</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Aparicio, Ricardo</creatorcontrib><creatorcontrib>Neyen, Claudine</creatorcontrib><creatorcontrib>Lemaitre, Bruno</creatorcontrib><creatorcontrib>Busturia, Ana</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Opposing Viewpoints</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Nursing & Allied Health Database</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Meteorological & Geoastrophysical Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies & Aerospace Collection</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>Meteorological & Geoastrophysical Abstracts - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Aparicio, Ricardo</au><au>Neyen, Claudine</au><au>Lemaitre, Bruno</au><au>Busturia, Ana</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>dRYBP contributes to the negative regulation of the Drosophila Imd pathway</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2013-04-15</date><risdate>2013</risdate><volume>8</volume><issue>4</issue><spage>e62052</spage><epage>e62052</epage><pages>e62052-e62052</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>The Drosophila humoral innate immune response fights infection by producing antimicrobial peptides (AMPs) through the microbe-specific activation of the Toll or the Imd signaling pathway. Upon systemic infection, the production of AMPs is both positively and negatively regulated to reach a balanced immune response required for survival. Here, we report the function of the dRYBP (drosophila Ring and YY1 Binding Protein) protein, which contains a ubiquitin-binding domain, in the Imd pathway. We have found that dRYBP contributes to the negative regulation of AMP production: upon systemic infection with Gram-negative bacteria, Diptericin expression is up-regulated in the absence of dRYBP and down-regulated in the presence of high levels of dRYBP. Epistatic analyses using gain and loss of function alleles of imd, Relish, or skpA and dRYBP suggest that dRYBP functions upstream or together with SKPA, a member of the SCF-E3-ubiquitin ligase complex, to repress the Imd signaling cascade. We propose that the role of dRYBP in the regulation of the Imd signaling pathway is to function as a ubiquitin adaptor protein together with SKPA to promote SCF-dependent proteasomal degradation of Relish. Beyond the identification of dRYBP as a novel component of Imd pathway regulation, our results also suggest that the evolutionarily conserved RYBP protein may be involved in the human innate immune response.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>23596533</pmid><doi>10.1371/journal.pone.0062052</doi><tpages>e62052</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adenosine Monophosphate - biosynthesis Animals Animals, Genetically Modified Antimicrobial peptides Apoptosis Bacteria Bacterial infections Binding Biodegradation Biology Cell Nucleus - metabolism Disseminated infection Down-regulation Drosophila Drosophila - genetics Drosophila - immunology Drosophila - metabolism Drosophila Proteins - deficiency Drosophila Proteins - genetics Drosophila Proteins - metabolism E coli Epistasis Epistasis, Genetic Fat Body - cytology Fat Body - metabolism Female Gene Expression Genomes Gram-negative bacteria Health aspects Human behavior Immune response Immune response (humoral) Immune system Infection Infections Innate immunity Insects Kinases Life sciences Male Mutation Peptides Proteasomes Protein binding Proteins Regulations Repressor Proteins - deficiency Repressor Proteins - genetics Repressor Proteins - metabolism Signal Transduction Signaling Ubiquitin Ubiquitin-protein ligase YY1 protein |
title | dRYBP contributes to the negative regulation of the Drosophila Imd pathway |
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