Forward genetic screening for the improved production of fermentable sugars from plant biomass
With their unique metabolism and the potential to produce large amounts of biomass, plants are an excellent bio-energy feedstock for a variety of industrial purposes. Here we developed a high-throughput strategy, using the model plant Arabidopsis thaliana, to identify mutants with improved sugar rel...
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| Veröffentlicht in: | PloS one 2013-01, Vol.8 (1), p.e55616-e55616 |
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| creator | Stamatiou, George Vidaurre, Danielle P Shim, Isaac Tang, Xurong Moeder, Wolfgang Bonetta, Dario McCourt, Peter |
| description | With their unique metabolism and the potential to produce large amounts of biomass, plants are an excellent bio-energy feedstock for a variety of industrial purposes. Here we developed a high-throughput strategy, using the model plant Arabidopsis thaliana, to identify mutants with improved sugar release from plant biomass. Molecular analysis indicates a variety of processes including starch degradation, cell wall composition and polar transport of the plant hormone auxin can contribute to this improved saccharification. To demonstrate translatability, polar auxin transport in maize was either genetically or chemical inhibited and this also resulted in increased sugar release from plant tissues. Our forward genetic approach using Arabidopsis not only uncovers new functions that contribute to cell wall integrity but also demonstrates that information gleaned from this genetic model can be directly translated to monocotyledonous crops such as maize to improve sugar extractability from biomass. |
| doi_str_mv | 10.1371/journal.pone.0055616 |
| format | Article |
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Here we developed a high-throughput strategy, using the model plant Arabidopsis thaliana, to identify mutants with improved sugar release from plant biomass. Molecular analysis indicates a variety of processes including starch degradation, cell wall composition and polar transport of the plant hormone auxin can contribute to this improved saccharification. To demonstrate translatability, polar auxin transport in maize was either genetically or chemical inhibited and this also resulted in increased sugar release from plant tissues. Our forward genetic approach using Arabidopsis not only uncovers new functions that contribute to cell wall integrity but also demonstrates that information gleaned from this genetic model can be directly translated to monocotyledonous crops such as maize to improve sugar extractability from biomass.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0055616</identifier><identifier>PMID: 23383246</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Acids ; Analysis ; Arabidopsis ; Arabidopsis - genetics ; Arabidopsis - metabolism ; Arabidopsis thaliana ; Biodegradation ; Biological Transport ; Biology ; Biomass ; Biomass energy ; Biomass energy production ; Carbohydrate Metabolism - genetics ; Carbohydrates - biosynthesis ; Cell walls ; Cellulose ; Chromosome Mapping ; Cluster Analysis ; Corn ; Enzymes ; Ethanol ; Fermentation ; Genes, Plant ; Genetic engineering ; Genetic screening ; Genetic Testing ; Hydrolysis ; Indoleacetic Acids - metabolism ; Kinases ; Lignin ; Medical screening ; Metabolism ; Mutants ; Mutation ; Panicum virgatum ; Plant biomass ; Plant hormones ; Plant tissues ; Plants (botany) ; Plants, Genetically Modified ; Saccharification ; Seeds ; Starch ; Starch - metabolism ; Sugar ; Sugar industry ; Transport</subject><ispartof>PloS one, 2013-01, Vol.8 (1), p.e55616-e55616</ispartof><rights>COPYRIGHT 2013 Public Library of Science</rights><rights>2013 Stamatiou et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2013 Stamatiou et al 2013 Stamatiou et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c758t-91f3de616428ad04102da375c13d5639b5a6048b0a1cc7cd85fdc18b9f3a37053</citedby><cites>FETCH-LOGICAL-c758t-91f3de616428ad04102da375c13d5639b5a6048b0a1cc7cd85fdc18b9f3a37053</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561329/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561329/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2095,2914,23846,27903,27904,53769,53771,79346,79347</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23383246$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Hazen, Samuel P.</contributor><creatorcontrib>Stamatiou, George</creatorcontrib><creatorcontrib>Vidaurre, Danielle P</creatorcontrib><creatorcontrib>Shim, Isaac</creatorcontrib><creatorcontrib>Tang, Xurong</creatorcontrib><creatorcontrib>Moeder, Wolfgang</creatorcontrib><creatorcontrib>Bonetta, Dario</creatorcontrib><creatorcontrib>McCourt, Peter</creatorcontrib><title>Forward genetic screening for the improved production of fermentable sugars from plant biomass</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>With their unique metabolism and the potential to produce large amounts of biomass, plants are an excellent bio-energy feedstock for a variety of industrial purposes. Here we developed a high-throughput strategy, using the model plant Arabidopsis thaliana, to identify mutants with improved sugar release from plant biomass. Molecular analysis indicates a variety of processes including starch degradation, cell wall composition and polar transport of the plant hormone auxin can contribute to this improved saccharification. To demonstrate translatability, polar auxin transport in maize was either genetically or chemical inhibited and this also resulted in increased sugar release from plant tissues. 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| subjects | Acids Analysis Arabidopsis Arabidopsis - genetics Arabidopsis - metabolism Arabidopsis thaliana Biodegradation Biological Transport Biology Biomass Biomass energy Biomass energy production Carbohydrate Metabolism - genetics Carbohydrates - biosynthesis Cell walls Cellulose Chromosome Mapping Cluster Analysis Corn Enzymes Ethanol Fermentation Genes, Plant Genetic engineering Genetic screening Genetic Testing Hydrolysis Indoleacetic Acids - metabolism Kinases Lignin Medical screening Metabolism Mutants Mutation Panicum virgatum Plant biomass Plant hormones Plant tissues Plants (botany) Plants, Genetically Modified Saccharification Seeds Starch Starch - metabolism Sugar Sugar industry Transport |
| title | Forward genetic screening for the improved production of fermentable sugars from plant biomass |
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