Combined mitochondrial and nuclear markers revealed a deep vicariant history for Leopoldamys neilli, a cave-dwelling rodent of Thailand
Historical biogeography and evolutionary processes of cave taxa have been widely studied in temperate regions. However, Southeast Asian cave ecosystems remain largely unexplored despite their high scientific interest. Here we studied the phylogeography of Leopoldamys neilli, a cave-dwelling murine r...
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| creator | Latinne, Alice Waengsothorn, Surachit Rojanadilok, Prateep Eiamampai, Krairat Sribuarod, Kriangsak Michaux, Johan R |
| description | Historical biogeography and evolutionary processes of cave taxa have been widely studied in temperate regions. However, Southeast Asian cave ecosystems remain largely unexplored despite their high scientific interest. Here we studied the phylogeography of Leopoldamys neilli, a cave-dwelling murine rodent living in limestone karsts of Thailand, and compared the molecular signature of mitochondrial and nuclear markers.
We used a large sampling (n = 225) from 28 localities in Thailand and a combination of mitochondrial and nuclear markers with various evolutionary rates (two intronic regions and 12 microsatellites). The evolutionary history of L. neilli and the relative role of vicariance and dispersal were investigated using ancestral range reconstruction analysis and Approximate Bayesian computation (ABC). Both mitochondrial and nuclear markers support a large-scale population structure of four main groups (west, centre, north and northeast) and a strong finer structure within each of these groups. A deep genealogical divergence among geographically close lineages is observed and denotes a high population fragmentation. Our findings suggest that the current phylogeographic pattern of this species results from the fragmentation of a widespread ancestral population and that vicariance has played a significant role in the evolutionary history of L. neilli. These deep vicariant events that occurred during Plio-Pleistocene are related to the formation of the Central Plain of Thailand. Consequently, the western, central, northern and northeastern groups of populations were historically isolated and should be considered as four distinct Evolutionarily Significant Units (ESUs).
Our study confirms the benefit of using several independent genetic markers to obtain a comprehensive and reliable picture of L. neilli evolutionary history at different levels of resolution. The complex genetic structure of Leopoldamys neilli is supported by congruent mitochondrial and nuclear markers and has been influenced by the geological history of Thailand during Plio-Pleistocene. |
| doi_str_mv | 10.1371/journal.pone.0047670 |
| format | Article |
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We used a large sampling (n = 225) from 28 localities in Thailand and a combination of mitochondrial and nuclear markers with various evolutionary rates (two intronic regions and 12 microsatellites). The evolutionary history of L. neilli and the relative role of vicariance and dispersal were investigated using ancestral range reconstruction analysis and Approximate Bayesian computation (ABC). Both mitochondrial and nuclear markers support a large-scale population structure of four main groups (west, centre, north and northeast) and a strong finer structure within each of these groups. A deep genealogical divergence among geographically close lineages is observed and denotes a high population fragmentation. Our findings suggest that the current phylogeographic pattern of this species results from the fragmentation of a widespread ancestral population and that vicariance has played a significant role in the evolutionary history of L. neilli. These deep vicariant events that occurred during Plio-Pleistocene are related to the formation of the Central Plain of Thailand. Consequently, the western, central, northern and northeastern groups of populations were historically isolated and should be considered as four distinct Evolutionarily Significant Units (ESUs).
Our study confirms the benefit of using several independent genetic markers to obtain a comprehensive and reliable picture of L. neilli evolutionary history at different levels of resolution. The complex genetic structure of Leopoldamys neilli is supported by congruent mitochondrial and nuclear markers and has been influenced by the geological history of Thailand during Plio-Pleistocene.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0047670</identifier><identifier>PMID: 23118888</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Animals ; Bayesian analysis ; Biodiversity ; Biogeography ; Bioinformatics ; Biological evolution ; Biology ; Cave ; Caves ; Cell Nucleus - genetics ; Comparative analysis ; Deoxyribonucleic acid ; Dinaromys bogdanovi ; Dispersal ; Divergence ; DNA ; DNA, Mitochondrial - genetics ; Ecosystem ; Ecosystems ; Environmental economics ; Evolution ; Evolution, Molecular ; Evolutionary genetics ; Fragmentation ; Genetic markers ; Genetic structure ; Genetics & genetic processes ; Genetics, Population ; Geography ; Génétique & processus génétiques ; Haplotypes ; Historical account ; Hypotheses ; Leopoldamys ; Leopoldamys edwardsi ; Leopoldamys neilli ; Leopoldamys sabanus ; Life Sciences ; Limestone ; Limestone karsts ; Markers ; Microsatellite Repeats - genetics ; Microsatellites ; Mineral resources ; Mitochondria ; Mitochondrial DNA ; Murinae - genetics ; Phylogenetics ; Phylogeography ; Pleistocene ; Population ; Population structure ; Rodentia ; Rodents ; Sciences du vivant ; Sequence Analysis, DNA ; Southeast Asia ; Subterranean habitat ; Taxa ; Thailand ; Trends ; Vicariance ; Zoologie ; Zoology</subject><ispartof>PloS one, 2012-10, Vol.7 (10), p.e47670-e47670</ispartof><rights>COPYRIGHT 2012 Public Library of Science</rights><rights>2012 Latinne et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>2012 Latinne et al 2012 Latinne et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c770t-21128254e227b1b201b3ca4afb79d6147fb17ad4fe171b1bf1b4f280013cdf413</citedby><cites>FETCH-LOGICAL-c770t-21128254e227b1b201b3ca4afb79d6147fb17ad4fe171b1bf1b4f280013cdf413</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3485250/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3485250/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79343,79344</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23118888$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.inrae.fr/hal-02644258$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Latinne, Alice</creatorcontrib><creatorcontrib>Waengsothorn, Surachit</creatorcontrib><creatorcontrib>Rojanadilok, Prateep</creatorcontrib><creatorcontrib>Eiamampai, Krairat</creatorcontrib><creatorcontrib>Sribuarod, Kriangsak</creatorcontrib><creatorcontrib>Michaux, Johan R</creatorcontrib><title>Combined mitochondrial and nuclear markers revealed a deep vicariant history for Leopoldamys neilli, a cave-dwelling rodent of Thailand</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Historical biogeography and evolutionary processes of cave taxa have been widely studied in temperate regions. However, Southeast Asian cave ecosystems remain largely unexplored despite their high scientific interest. Here we studied the phylogeography of Leopoldamys neilli, a cave-dwelling murine rodent living in limestone karsts of Thailand, and compared the molecular signature of mitochondrial and nuclear markers.
We used a large sampling (n = 225) from 28 localities in Thailand and a combination of mitochondrial and nuclear markers with various evolutionary rates (two intronic regions and 12 microsatellites). The evolutionary history of L. neilli and the relative role of vicariance and dispersal were investigated using ancestral range reconstruction analysis and Approximate Bayesian computation (ABC). Both mitochondrial and nuclear markers support a large-scale population structure of four main groups (west, centre, north and northeast) and a strong finer structure within each of these groups. A deep genealogical divergence among geographically close lineages is observed and denotes a high population fragmentation. Our findings suggest that the current phylogeographic pattern of this species results from the fragmentation of a widespread ancestral population and that vicariance has played a significant role in the evolutionary history of L. neilli. These deep vicariant events that occurred during Plio-Pleistocene are related to the formation of the Central Plain of Thailand. Consequently, the western, central, northern and northeastern groups of populations were historically isolated and should be considered as four distinct Evolutionarily Significant Units (ESUs).
Our study confirms the benefit of using several independent genetic markers to obtain a comprehensive and reliable picture of L. neilli evolutionary history at different levels of resolution. The complex genetic structure of Leopoldamys neilli is supported by congruent mitochondrial and nuclear markers and has been influenced by the geological history of Thailand during Plio-Pleistocene.</description><subject>Animals</subject><subject>Bayesian analysis</subject><subject>Biodiversity</subject><subject>Biogeography</subject><subject>Bioinformatics</subject><subject>Biological evolution</subject><subject>Biology</subject><subject>Cave</subject><subject>Caves</subject><subject>Cell Nucleus - genetics</subject><subject>Comparative analysis</subject><subject>Deoxyribonucleic acid</subject><subject>Dinaromys bogdanovi</subject><subject>Dispersal</subject><subject>Divergence</subject><subject>DNA</subject><subject>DNA, Mitochondrial - genetics</subject><subject>Ecosystem</subject><subject>Ecosystems</subject><subject>Environmental economics</subject><subject>Evolution</subject><subject>Evolution, Molecular</subject><subject>Evolutionary genetics</subject><subject>Fragmentation</subject><subject>Genetic markers</subject><subject>Genetic structure</subject><subject>Genetics & genetic processes</subject><subject>Genetics, Population</subject><subject>Geography</subject><subject>Génétique & processus génétiques</subject><subject>Haplotypes</subject><subject>Historical account</subject><subject>Hypotheses</subject><subject>Leopoldamys</subject><subject>Leopoldamys edwardsi</subject><subject>Leopoldamys neilli</subject><subject>Leopoldamys sabanus</subject><subject>Life Sciences</subject><subject>Limestone</subject><subject>Limestone karsts</subject><subject>Markers</subject><subject>Microsatellite Repeats - genetics</subject><subject>Microsatellites</subject><subject>Mineral resources</subject><subject>Mitochondria</subject><subject>Mitochondrial DNA</subject><subject>Murinae - genetics</subject><subject>Phylogenetics</subject><subject>Phylogeography</subject><subject>Pleistocene</subject><subject>Population</subject><subject>Population structure</subject><subject>Rodentia</subject><subject>Rodents</subject><subject>Sciences du vivant</subject><subject>Sequence Analysis, DNA</subject><subject>Southeast Asia</subject><subject>Subterranean habitat</subject><subject>Taxa</subject><subject>Thailand</subject><subject>Trends</subject><subject>Vicariance</subject><subject>Zoologie</subject><subject>Zoology</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNqNk99u0zAUxiMEYmPwBggiISEm0eJ_cZIbpGoCNqnSJBjcWo590ni4cbGTwp6A1-Z07aZ12gXJRRzn953j8-WcLHtJyZTykn64DGPstZ-uQg9TQkQpS_IoO6Q1ZxPJCH98Z32QPUvpkpCCV1I-zQ4Yp7TC6zD7exKWjevB5ks3BNOF3kanfa57m_ej8aBjvtTxJ8SUR1iD9ojq3AKs8rUzGuF-yDuXhhCv8jbEfA5hFbzVy6uU9-C8d-9RYPQaJvY34Gu_yGOwgLLQ5heddh6TPc-etNoneLF7HmXfP3-6ODmdzM-_nJ3M5hNTlmSYMEpZxQoBjJUNbRihDTda6LYpayupKNuGltqKFmhJEWhpI1pWEUK5sa2g_Ch7vY278iGpnYdJUc5kISmvKyTOtoQN-lKtosPyr1TQTl1vhLhQOg4OrVG6KBopayraRosaWF2UoK0mYEVZUcMw1sddtrFZgjVYdNR-L-j-l951ahHWiouqYAXBAHwbwDtYACZvnFqza-H1evR4GqMaUIzJCsvgVS1QdbxVdfeSnc7marNHmBSCFdV6Y8i73RFj-DVCGtTSJYP_SfcQRnSGMilpgQpE39xDH_ZvRy2wV5Tr24CVmU1QNcMmrStZsA01fYDC28LSGWzp1uH-nuB4T4DMAH-GhR5TUmffvv4_e_5jn317h-2wwYcuBT8OLvRpHxRb0MSQUoT21llK1GYib9xQm4lUu4lE2au7LXAruhlB_g-lfjD3</recordid><startdate>20121031</startdate><enddate>20121031</enddate><creator>Latinne, Alice</creator><creator>Waengsothorn, Surachit</creator><creator>Rojanadilok, Prateep</creator><creator>Eiamampai, Krairat</creator><creator>Sribuarod, Kriangsak</creator><creator>Michaux, Johan R</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope><scope>Q33</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20121031</creationdate><title>Combined mitochondrial and nuclear markers revealed a deep vicariant history for Leopoldamys neilli, a cave-dwelling rodent of Thailand</title><author>Latinne, Alice ; Waengsothorn, Surachit ; Rojanadilok, Prateep ; Eiamampai, Krairat ; Sribuarod, Kriangsak ; Michaux, Johan R</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c770t-21128254e227b1b201b3ca4afb79d6147fb17ad4fe171b1bf1b4f280013cdf413</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Animals</topic><topic>Bayesian analysis</topic><topic>Biodiversity</topic><topic>Biogeography</topic><topic>Bioinformatics</topic><topic>Biological evolution</topic><topic>Biology</topic><topic>Cave</topic><topic>Caves</topic><topic>Cell Nucleus - 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genetics</topic><topic>Microsatellites</topic><topic>Mineral resources</topic><topic>Mitochondria</topic><topic>Mitochondrial DNA</topic><topic>Murinae - genetics</topic><topic>Phylogenetics</topic><topic>Phylogeography</topic><topic>Pleistocene</topic><topic>Population</topic><topic>Population structure</topic><topic>Rodentia</topic><topic>Rodents</topic><topic>Sciences du vivant</topic><topic>Sequence Analysis, DNA</topic><topic>Southeast Asia</topic><topic>Subterranean habitat</topic><topic>Taxa</topic><topic>Thailand</topic><topic>Trends</topic><topic>Vicariance</topic><topic>Zoologie</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Latinne, Alice</creatorcontrib><creatorcontrib>Waengsothorn, Surachit</creatorcontrib><creatorcontrib>Rojanadilok, Prateep</creatorcontrib><creatorcontrib>Eiamampai, Krairat</creatorcontrib><creatorcontrib>Sribuarod, Kriangsak</creatorcontrib><creatorcontrib>Michaux, Johan R</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Opposing Viewpoints in Context (Gale)</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Proquest Nursing & Allied Health Source</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Meteorological & Geoastrophysical Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies & Aerospace Collection</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection (ProQuest)</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>Meteorological & Geoastrophysical Abstracts - 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Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><collection>Université de Liège - Open Repository and Bibliography (ORBI)</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Latinne, Alice</au><au>Waengsothorn, Surachit</au><au>Rojanadilok, Prateep</au><au>Eiamampai, Krairat</au><au>Sribuarod, Kriangsak</au><au>Michaux, Johan R</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Combined mitochondrial and nuclear markers revealed a deep vicariant history for Leopoldamys neilli, a cave-dwelling rodent of Thailand</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2012-10-31</date><risdate>2012</risdate><volume>7</volume><issue>10</issue><spage>e47670</spage><epage>e47670</epage><pages>e47670-e47670</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Historical biogeography and evolutionary processes of cave taxa have been widely studied in temperate regions. However, Southeast Asian cave ecosystems remain largely unexplored despite their high scientific interest. Here we studied the phylogeography of Leopoldamys neilli, a cave-dwelling murine rodent living in limestone karsts of Thailand, and compared the molecular signature of mitochondrial and nuclear markers.
We used a large sampling (n = 225) from 28 localities in Thailand and a combination of mitochondrial and nuclear markers with various evolutionary rates (two intronic regions and 12 microsatellites). The evolutionary history of L. neilli and the relative role of vicariance and dispersal were investigated using ancestral range reconstruction analysis and Approximate Bayesian computation (ABC). Both mitochondrial and nuclear markers support a large-scale population structure of four main groups (west, centre, north and northeast) and a strong finer structure within each of these groups. A deep genealogical divergence among geographically close lineages is observed and denotes a high population fragmentation. Our findings suggest that the current phylogeographic pattern of this species results from the fragmentation of a widespread ancestral population and that vicariance has played a significant role in the evolutionary history of L. neilli. These deep vicariant events that occurred during Plio-Pleistocene are related to the formation of the Central Plain of Thailand. Consequently, the western, central, northern and northeastern groups of populations were historically isolated and should be considered as four distinct Evolutionarily Significant Units (ESUs).
Our study confirms the benefit of using several independent genetic markers to obtain a comprehensive and reliable picture of L. neilli evolutionary history at different levels of resolution. The complex genetic structure of Leopoldamys neilli is supported by congruent mitochondrial and nuclear markers and has been influenced by the geological history of Thailand during Plio-Pleistocene.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>23118888</pmid><doi>10.1371/journal.pone.0047670</doi><tpages>e47670</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1932-6203 |
| ispartof | PloS one, 2012-10, Vol.7 (10), p.e47670-e47670 |
| issn | 1932-6203 1932-6203 |
| language | eng |
| recordid | cdi_plos_journals_1326561398 |
| source | MEDLINE; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry; Public Library of Science (PLoS) Journals Open Acc |
| subjects | Animals Bayesian analysis Biodiversity Biogeography Bioinformatics Biological evolution Biology Cave Caves Cell Nucleus - genetics Comparative analysis Deoxyribonucleic acid Dinaromys bogdanovi Dispersal Divergence DNA DNA, Mitochondrial - genetics Ecosystem Ecosystems Environmental economics Evolution Evolution, Molecular Evolutionary genetics Fragmentation Genetic markers Genetic structure Genetics & genetic processes Genetics, Population Geography Génétique & processus génétiques Haplotypes Historical account Hypotheses Leopoldamys Leopoldamys edwardsi Leopoldamys neilli Leopoldamys sabanus Life Sciences Limestone Limestone karsts Markers Microsatellite Repeats - genetics Microsatellites Mineral resources Mitochondria Mitochondrial DNA Murinae - genetics Phylogenetics Phylogeography Pleistocene Population Population structure Rodentia Rodents Sciences du vivant Sequence Analysis, DNA Southeast Asia Subterranean habitat Taxa Thailand Trends Vicariance Zoologie Zoology |
| title | Combined mitochondrial and nuclear markers revealed a deep vicariant history for Leopoldamys neilli, a cave-dwelling rodent of Thailand |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-01T18%3A11%3A47IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Combined%20mitochondrial%20and%20nuclear%20markers%20revealed%20a%20deep%20vicariant%20history%20for%20Leopoldamys%20neilli,%20a%20cave-dwelling%20rodent%20of%20Thailand&rft.jtitle=PloS%20one&rft.au=Latinne,%20Alice&rft.date=2012-10-31&rft.volume=7&rft.issue=10&rft.spage=e47670&rft.epage=e47670&rft.pages=e47670-e47670&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0047670&rft_dat=%3Cgale_plos_%3EA476986528%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1326561398&rft_id=info:pmid/23118888&rft_galeid=A476986528&rft_doaj_id=oai_doaj_org_article_a55b66914fba49e2957eada0ed4781c2&rfr_iscdi=true |