Depletion of c-Rel from cytokine gene promoters is required for chromatin reassembly and termination of gene responses to T cell activation

The role of the Nuclear Factor κB (NF-κB) transcription factor family in T cell function has been well described. The c-Rel family member is of particular importance in initiating T cell responses to antigen and regulating activation of inflammatory cytokine genes, including the Interleukin-2 (IL-2)...

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Veröffentlicht in:PloS one 2012-07, Vol.7 (7), p.e41734-e41734
Hauptverfasser: Poke, Fiona S, Upcher, William R, Sprod, Owen R, Young, Arabella, Brettingham-Moore, Kate H, Holloway, Adele F
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creator Poke, Fiona S
Upcher, William R
Sprod, Owen R
Young, Arabella
Brettingham-Moore, Kate H
Holloway, Adele F
description The role of the Nuclear Factor κB (NF-κB) transcription factor family in T cell function has been well described. The c-Rel family member is of particular importance in initiating T cell responses to antigen and regulating activation of inflammatory cytokine genes, including the Interleukin-2 (IL-2) and Granulocyte macrophage colony stimulating factor (GM-CSF) genes. c-Rel is required for chromatin remodeling of these gene promoters, which involves depletion of histones from the promoters in response to T cell activating signals. These chromatin remodeling events precede transcriptional activation of the genes. The subsequent down-regulation of cytokine gene expression is important in the termination of an immune response and here we examine this process at the murine GM-CSF and IL-2 genes. We show that the cytokine mRNA levels rapidly return to basal levels following stimulus removal and this is associated with reassembly of histones onto the promoter. Histone reassembly at the GM-CSF and IL-2 promoters occurs concomitantly with depletion of RelA, c-Rel and RNA polymerase II from the promoters. Furthermore we show that transcriptional down-regulation and chromatin reassembly is dependent on depletion of c-Rel from the nucleus, and that this is regulated by the nuclear translocation of the NF-κB inhibitor, IκBα. The nuclear activation of c-Rel therefore not only regulates the initiation of GM-CSF and IL-2 gene activation in response to T cell activation, but also the termination of these gene responses following the removal of the activating signal.
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The c-Rel family member is of particular importance in initiating T cell responses to antigen and regulating activation of inflammatory cytokine genes, including the Interleukin-2 (IL-2) and Granulocyte macrophage colony stimulating factor (GM-CSF) genes. c-Rel is required for chromatin remodeling of these gene promoters, which involves depletion of histones from the promoters in response to T cell activating signals. These chromatin remodeling events precede transcriptional activation of the genes. The subsequent down-regulation of cytokine gene expression is important in the termination of an immune response and here we examine this process at the murine GM-CSF and IL-2 genes. We show that the cytokine mRNA levels rapidly return to basal levels following stimulus removal and this is associated with reassembly of histones onto the promoter. Histone reassembly at the GM-CSF and IL-2 promoters occurs concomitantly with depletion of RelA, c-Rel and RNA polymerase II from the promoters. 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The c-Rel family member is of particular importance in initiating T cell responses to antigen and regulating activation of inflammatory cytokine genes, including the Interleukin-2 (IL-2) and Granulocyte macrophage colony stimulating factor (GM-CSF) genes. c-Rel is required for chromatin remodeling of these gene promoters, which involves depletion of histones from the promoters in response to T cell activating signals. These chromatin remodeling events precede transcriptional activation of the genes. The subsequent down-regulation of cytokine gene expression is important in the termination of an immune response and here we examine this process at the murine GM-CSF and IL-2 genes. We show that the cytokine mRNA levels rapidly return to basal levels following stimulus removal and this is associated with reassembly of histones onto the promoter. Histone reassembly at the GM-CSF and IL-2 promoters occurs concomitantly with depletion of RelA, c-Rel and RNA polymerase II from the promoters. 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metabolism</subject><subject>Proto-Oncogene Proteins c-rel - physiology</subject><subject>RelA protein</subject><subject>Remodeling</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>RNA polymerase II</subject><subject>RNA Polymerase II - metabolism</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Messenger - metabolism</subject><subject>Rodents</subject><subject>T cell receptors</subject><subject>T cells</subject><subject>T-Lymphocytes - immunology</subject><subject>T-Lymphocytes - metabolism</subject><subject>Transcription (Genetics)</subject><subject>Transcription activation</subject><subject>Transcription, Genetic</subject><subject>Translocation</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNqNk12LEzEUhgdR3HX1H4gGBNGL1nzNTHIjLOtXYWFhXb0NaeZMmzoz6SaZxf4G_7SZdrq0shcSSMLJc94kb3Ky7CXBU8JK8mHlet_pZrp2HUwx5qRk_FF2SiSjk4Ji9vhgfpI9C2GFcc5EUTzNTigVBcaEnGZ_PsG6gWhdh1yNzOQaGlR71yKzie6X7QAtIHXrFHIRfEA2IA-3vfVQodp5ZJZpSUfbpbAOAdp5s0G6q1CiW9vpvfRWxkNIxw0QUHToBhloGqRNtHdb7Hn2pNZNgBfjeJb9-PL55uLb5PLq6-zi_HJiCknjhBtRirJkmJa0ZnVZasILWVKZmgbGBXAoirqcg6ZSlBqEMIIwViTbKq0ZO8te73TXjQtq9DEowmieU5ITkYjZjqicXqm1t632G-W0VduA8wulfbSmAaWlkLzCRQVS8FLCnFfzQuZFVWHOWE6T1sdxt37eQmWgi143R6LHK51dqoW7U4xjweUg8G4U8O62hxBVa8Ngne7A9encmBGSJ0cG9M0_6MO3G6mFThewXe3SvmYQVedcCsqZ5DxR0weo1CporUmfrrYpfpTw_ighMRF-x4XuQ1Cz79f_z179PGbfHrBL0E1cBtf0w5cJxyDfgca7EDzU9yYTrIaa2buhhppRY82ktFeHD3SftC8S9hd38RHs</recordid><startdate>20120730</startdate><enddate>20120730</enddate><creator>Poke, Fiona S</creator><creator>Upcher, William R</creator><creator>Sprod, Owen R</creator><creator>Young, Arabella</creator><creator>Brettingham-Moore, Kate H</creator><creator>Holloway, Adele F</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20120730</creationdate><title>Depletion of c-Rel from cytokine gene promoters is required for chromatin reassembly and termination of gene responses to T cell activation</title><author>Poke, Fiona S ; Upcher, William R ; Sprod, Owen R ; Young, Arabella ; Brettingham-Moore, Kate H ; Holloway, Adele F</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c692t-4c8787730272f3f77a1469729292ae348e4e66f7bea2987ae88c81336137daa33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Activation</topic><topic>Animals</topic><topic>Binding sites</topic><topic>Biology</topic><topic>Cell activation</topic><topic>Cell Line</topic><topic>Cell Nucleus - metabolism</topic><topic>Chromatin</topic><topic>Chromatin Assembly and Disassembly</topic><topic>Chromatin remodeling</topic><topic>Colony-stimulating factor</topic><topic>Depletion</topic><topic>DNA binding proteins</topic><topic>DNA-directed RNA polymerase</topic><topic>Down-Regulation</topic><topic>Gene expression</topic><topic>Gene regulation</topic><topic>Genes</topic><topic>Genetic aspects</topic><topic>Granulocyte-macrophage colony-stimulating factor</topic><topic>Granulocyte-Macrophage Colony-Stimulating Factor - genetics</topic><topic>Granulocyte-Macrophage Colony-Stimulating Factor - metabolism</topic><topic>Histones</topic><topic>Histones - metabolism</topic><topic>I-kappa B Proteins - metabolism</topic><topic>Immune response</topic><topic>Immune system</topic><topic>Inflammation</topic><topic>Interleukin</topic><topic>Interleukin 2</topic><topic>Interleukin-2 - genetics</topic><topic>Interleukin-2 - metabolism</topic><topic>Interleukins</topic><topic>Kinases</topic><topic>Leukocytes (granulocytic)</topic><topic>Lymphocyte Activation</topic><topic>Lymphocytes T</topic><topic>Macrophage colony stimulating factor</topic><topic>Macrophages</topic><topic>Medicine</topic><topic>Mice</topic><topic>NF-KappaB Inhibitor alpha</topic><topic>NF-κB protein</topic><topic>Nuclear transport</topic><topic>Promoter Regions, Genetic</topic><topic>Promoters</topic><topic>Protein Binding</topic><topic>Protein Transport</topic><topic>Proteolysis</topic><topic>Proto-Oncogene Proteins c-rel - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Poke, Fiona S</au><au>Upcher, William R</au><au>Sprod, Owen R</au><au>Young, Arabella</au><au>Brettingham-Moore, Kate H</au><au>Holloway, Adele F</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Depletion of c-Rel from cytokine gene promoters is required for chromatin reassembly and termination of gene responses to T cell activation</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2012-07-30</date><risdate>2012</risdate><volume>7</volume><issue>7</issue><spage>e41734</spage><epage>e41734</epage><pages>e41734-e41734</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>The role of the Nuclear Factor κB (NF-κB) transcription factor family in T cell function has been well described. The c-Rel family member is of particular importance in initiating T cell responses to antigen and regulating activation of inflammatory cytokine genes, including the Interleukin-2 (IL-2) and Granulocyte macrophage colony stimulating factor (GM-CSF) genes. c-Rel is required for chromatin remodeling of these gene promoters, which involves depletion of histones from the promoters in response to T cell activating signals. These chromatin remodeling events precede transcriptional activation of the genes. The subsequent down-regulation of cytokine gene expression is important in the termination of an immune response and here we examine this process at the murine GM-CSF and IL-2 genes. We show that the cytokine mRNA levels rapidly return to basal levels following stimulus removal and this is associated with reassembly of histones onto the promoter. Histone reassembly at the GM-CSF and IL-2 promoters occurs concomitantly with depletion of RelA, c-Rel and RNA polymerase II from the promoters. Furthermore we show that transcriptional down-regulation and chromatin reassembly is dependent on depletion of c-Rel from the nucleus, and that this is regulated by the nuclear translocation of the NF-κB inhibitor, IκBα. The nuclear activation of c-Rel therefore not only regulates the initiation of GM-CSF and IL-2 gene activation in response to T cell activation, but also the termination of these gene responses following the removal of the activating signal.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>22860011</pmid><doi>10.1371/journal.pone.0041734</doi><tpages>e41734</tpages><oa>free_for_read</oa></addata></record>
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subjects Activation
Animals
Binding sites
Biology
Cell activation
Cell Line
Cell Nucleus - metabolism
Chromatin
Chromatin Assembly and Disassembly
Chromatin remodeling
Colony-stimulating factor
Depletion
DNA binding proteins
DNA-directed RNA polymerase
Down-Regulation
Gene expression
Gene regulation
Genes
Genetic aspects
Granulocyte-macrophage colony-stimulating factor
Granulocyte-Macrophage Colony-Stimulating Factor - genetics
Granulocyte-Macrophage Colony-Stimulating Factor - metabolism
Histones
Histones - metabolism
I-kappa B Proteins - metabolism
Immune response
Immune system
Inflammation
Interleukin
Interleukin 2
Interleukin-2 - genetics
Interleukin-2 - metabolism
Interleukins
Kinases
Leukocytes (granulocytic)
Lymphocyte Activation
Lymphocytes T
Macrophage colony stimulating factor
Macrophages
Medicine
Mice
NF-KappaB Inhibitor alpha
NF-κB protein
Nuclear transport
Promoter Regions, Genetic
Promoters
Protein Binding
Protein Transport
Proteolysis
Proto-Oncogene Proteins c-rel - metabolism
Proto-Oncogene Proteins c-rel - physiology
RelA protein
Remodeling
Ribonucleic acid
RNA
RNA polymerase II
RNA Polymerase II - metabolism
RNA, Messenger - genetics
RNA, Messenger - metabolism
Rodents
T cell receptors
T cells
T-Lymphocytes - immunology
T-Lymphocytes - metabolism
Transcription (Genetics)
Transcription activation
Transcription, Genetic
Translocation
title Depletion of c-Rel from cytokine gene promoters is required for chromatin reassembly and termination of gene responses to T cell activation
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