Effect of polymorphisms in XPD on clinical outcomes of platinum-based chemotherapy for Chinese non-small cell lung cancer patients

Xeroderma pigmentosum group D (XPD) codes for a DNA helicase involved in nucleotide excision repair that removes platinum-induced DNA damage. Genetic polymorphisms of XPD may affect DNA repair capacity and lead to individual differences in the outcome of patients after chemotherapy. This study aims...

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Veröffentlicht in:PloS one 2012-03, Vol.7 (3), p.e33200-e33200
Hauptverfasser: Wu, Wenting, Li, Huan, Wang, Huibo, Zhao, Xueying, Gao, Zhiqiang, Qiao, Rong, Zhang, Wei, Qian, Ji, Wang, Jiucun, Chen, Hongyan, Wei, Qingyi, Han, Baohui, Lu, Daru
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container_title PloS one
container_volume 7
creator Wu, Wenting
Li, Huan
Wang, Huibo
Zhao, Xueying
Gao, Zhiqiang
Qiao, Rong
Zhang, Wei
Qian, Ji
Wang, Jiucun
Chen, Hongyan
Wei, Qingyi
Han, Baohui
Lu, Daru
description Xeroderma pigmentosum group D (XPD) codes for a DNA helicase involved in nucleotide excision repair that removes platinum-induced DNA damage. Genetic polymorphisms of XPD may affect DNA repair capacity and lead to individual differences in the outcome of patients after chemotherapy. This study aims to identify whether XPD polymorphisms affect clinical efficacy among advanced non-small cell lung cancer (NSCLC) patients treated with platinum-based chemotherapy. 353 stage III-IV NSCLC patients receiving platinum-based chemotherapy as the first-line treatment were enrolled in this study. Four potentially functional XPD polymorphisms (Arg(156)Arg, Asp(312)Asn, Asp(711)Asp and Lys(751)Gln) were genotyped by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry or PCR-based sequencing. Variant genotypes of XPD Asp(312)Asn, Asp(711)Asp and Lys(751)Gln were significantly associated with poorer NSCLC survival (P = 0.006, 0.006, 0.014, respectively, by log-rank test). The most common haplotype GCA (in order of Asp(312)Asn, Asp(711)Asp and Lys(751)Gln) also exhibited significant risk effect on NSCLC survival (log-rank P = 0.001). This effect was more predominant for patients with stage IIIB disease (P = 2.21×10(-4), log-rank test). Increased risks for variant haplotypes of XPD were also observed among patients with performance status of 0-1 and patients with adenocarcinoma. However, no significant associations were found between these polymorphisms, chemotherapy response and PFS. Our study provides evidence for the predictive role of XPD Asp(312)Asn, Asp(711)Asp and Lys(751)Gln polymorphisms/haplotype on NSCLC prognosis in inoperable advanced NSCLC patients treated with platinum-based chemotherapy.
doi_str_mv 10.1371/journal.pone.0033200
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Genetic polymorphisms of XPD may affect DNA repair capacity and lead to individual differences in the outcome of patients after chemotherapy. This study aims to identify whether XPD polymorphisms affect clinical efficacy among advanced non-small cell lung cancer (NSCLC) patients treated with platinum-based chemotherapy. 353 stage III-IV NSCLC patients receiving platinum-based chemotherapy as the first-line treatment were enrolled in this study. Four potentially functional XPD polymorphisms (Arg(156)Arg, Asp(312)Asn, Asp(711)Asp and Lys(751)Gln) were genotyped by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry or PCR-based sequencing. Variant genotypes of XPD Asp(312)Asn, Asp(711)Asp and Lys(751)Gln were significantly associated with poorer NSCLC survival (P = 0.006, 0.006, 0.014, respectively, by log-rank test). The most common haplotype GCA (in order of Asp(312)Asn, Asp(711)Asp and Lys(751)Gln) also exhibited significant risk effect on NSCLC survival (log-rank P = 0.001). This effect was more predominant for patients with stage IIIB disease (P = 2.21×10(-4), log-rank test). Increased risks for variant haplotypes of XPD were also observed among patients with performance status of 0-1 and patients with adenocarcinoma. However, no significant associations were found between these polymorphisms, chemotherapy response and PFS. Our study provides evidence for the predictive role of XPD Asp(312)Asn, Asp(711)Asp and Lys(751)Gln polymorphisms/haplotype on NSCLC prognosis in inoperable advanced NSCLC patients treated with platinum-based chemotherapy.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0033200</identifier><identifier>PMID: 22479369</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Adenocarcinoma ; Adult ; Aged ; Aged, 80 and over ; Antineoplastic Combined Chemotherapy Protocols - therapeutic use ; Apoptosis ; Asian Continental Ancestry Group - genetics ; Biology ; Cancer ; Cancer therapies ; Carboplatin - administration &amp; dosage ; Carcinoma, Non-Small-Cell Lung - drug therapy ; Carcinoma, Non-Small-Cell Lung - ethnology ; Carcinoma, Non-Small-Cell Lung - genetics ; Care and treatment ; Chemotherapy ; China ; Cisplatin - administration &amp; dosage ; Clinical outcomes ; Deoxyribonucleic acid ; Disease ; Disease-Free Survival ; DNA ; DNA damage ; DNA helicase ; DNA repair ; Drug Administration Schedule ; Epidemiology ; Experimental design ; Female ; Gene Frequency ; Genetic aspects ; Genetic engineering ; Genetic polymorphisms ; Genetic testing ; Genotype ; Genotypes ; Glutamine ; Haplotypes ; Humans ; Influence ; Ionization ; Laboratories ; Life sciences ; Lung cancer ; Lung diseases ; Lung Neoplasms - drug therapy ; Lung Neoplasms - ethnology ; Lung Neoplasms - genetics ; Male ; Mass spectrometry ; Mass spectroscopy ; Medical prognosis ; Medical research ; Medicine ; Melanoma ; Middle Aged ; Multiple myeloma ; Multivariate Analysis ; Non-small cell lung cancer ; Non-small cell lung carcinoma ; Nucleotide excision repair ; Oncology ; Patient outcomes ; Patients ; Platinum ; Polymorphism, Single Nucleotide ; Prognosis ; Rankings ; Repair ; Respiratory diseases ; Skin cancer ; Small cell lung cancer ; Survival ; Treatment Outcome ; Xeroderma pigmentosum ; Xeroderma Pigmentosum Group D Protein - genetics ; XPD protein</subject><ispartof>PloS one, 2012-03, Vol.7 (3), p.e33200-e33200</ispartof><rights>COPYRIGHT 2012 Public Library of Science</rights><rights>2012 Wu et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Wu et al. 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c691t-c51b357d0758db9a61ac98b8669a8cd5b92582a58e4698ee603397c4fe0f2bb43</citedby><cites>FETCH-LOGICAL-c691t-c51b357d0758db9a61ac98b8669a8cd5b92582a58e4698ee603397c4fe0f2bb43</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3315552/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3315552/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79343,79344</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22479369$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wu, Wenting</creatorcontrib><creatorcontrib>Li, Huan</creatorcontrib><creatorcontrib>Wang, Huibo</creatorcontrib><creatorcontrib>Zhao, Xueying</creatorcontrib><creatorcontrib>Gao, Zhiqiang</creatorcontrib><creatorcontrib>Qiao, Rong</creatorcontrib><creatorcontrib>Zhang, Wei</creatorcontrib><creatorcontrib>Qian, Ji</creatorcontrib><creatorcontrib>Wang, Jiucun</creatorcontrib><creatorcontrib>Chen, Hongyan</creatorcontrib><creatorcontrib>Wei, Qingyi</creatorcontrib><creatorcontrib>Han, Baohui</creatorcontrib><creatorcontrib>Lu, Daru</creatorcontrib><title>Effect of polymorphisms in XPD on clinical outcomes of platinum-based chemotherapy for Chinese non-small cell lung cancer patients</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Xeroderma pigmentosum group D (XPD) codes for a DNA helicase involved in nucleotide excision repair that removes platinum-induced DNA damage. Genetic polymorphisms of XPD may affect DNA repair capacity and lead to individual differences in the outcome of patients after chemotherapy. This study aims to identify whether XPD polymorphisms affect clinical efficacy among advanced non-small cell lung cancer (NSCLC) patients treated with platinum-based chemotherapy. 353 stage III-IV NSCLC patients receiving platinum-based chemotherapy as the first-line treatment were enrolled in this study. Four potentially functional XPD polymorphisms (Arg(156)Arg, Asp(312)Asn, Asp(711)Asp and Lys(751)Gln) were genotyped by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry or PCR-based sequencing. Variant genotypes of XPD Asp(312)Asn, Asp(711)Asp and Lys(751)Gln were significantly associated with poorer NSCLC survival (P = 0.006, 0.006, 0.014, respectively, by log-rank test). The most common haplotype GCA (in order of Asp(312)Asn, Asp(711)Asp and Lys(751)Gln) also exhibited significant risk effect on NSCLC survival (log-rank P = 0.001). This effect was more predominant for patients with stage IIIB disease (P = 2.21×10(-4), log-rank test). Increased risks for variant haplotypes of XPD were also observed among patients with performance status of 0-1 and patients with adenocarcinoma. However, no significant associations were found between these polymorphisms, chemotherapy response and PFS. Our study provides evidence for the predictive role of XPD Asp(312)Asn, Asp(711)Asp and Lys(751)Gln polymorphisms/haplotype on NSCLC prognosis in inoperable advanced NSCLC patients treated with platinum-based chemotherapy.</description><subject>Adenocarcinoma</subject><subject>Adult</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Antineoplastic Combined Chemotherapy Protocols - therapeutic use</subject><subject>Apoptosis</subject><subject>Asian Continental Ancestry Group - genetics</subject><subject>Biology</subject><subject>Cancer</subject><subject>Cancer therapies</subject><subject>Carboplatin - administration &amp; dosage</subject><subject>Carcinoma, Non-Small-Cell Lung - drug therapy</subject><subject>Carcinoma, Non-Small-Cell Lung - ethnology</subject><subject>Carcinoma, Non-Small-Cell Lung - genetics</subject><subject>Care and treatment</subject><subject>Chemotherapy</subject><subject>China</subject><subject>Cisplatin - administration &amp; dosage</subject><subject>Clinical outcomes</subject><subject>Deoxyribonucleic acid</subject><subject>Disease</subject><subject>Disease-Free Survival</subject><subject>DNA</subject><subject>DNA damage</subject><subject>DNA helicase</subject><subject>DNA repair</subject><subject>Drug Administration Schedule</subject><subject>Epidemiology</subject><subject>Experimental design</subject><subject>Female</subject><subject>Gene Frequency</subject><subject>Genetic aspects</subject><subject>Genetic engineering</subject><subject>Genetic polymorphisms</subject><subject>Genetic testing</subject><subject>Genotype</subject><subject>Genotypes</subject><subject>Glutamine</subject><subject>Haplotypes</subject><subject>Humans</subject><subject>Influence</subject><subject>Ionization</subject><subject>Laboratories</subject><subject>Life sciences</subject><subject>Lung cancer</subject><subject>Lung diseases</subject><subject>Lung Neoplasms - 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drug therapy</topic><topic>Lung Neoplasms - ethnology</topic><topic>Lung Neoplasms - genetics</topic><topic>Male</topic><topic>Mass spectrometry</topic><topic>Mass spectroscopy</topic><topic>Medical prognosis</topic><topic>Medical research</topic><topic>Medicine</topic><topic>Melanoma</topic><topic>Middle Aged</topic><topic>Multiple myeloma</topic><topic>Multivariate Analysis</topic><topic>Non-small cell lung cancer</topic><topic>Non-small cell lung carcinoma</topic><topic>Nucleotide excision repair</topic><topic>Oncology</topic><topic>Patient outcomes</topic><topic>Patients</topic><topic>Platinum</topic><topic>Polymorphism, Single Nucleotide</topic><topic>Prognosis</topic><topic>Rankings</topic><topic>Repair</topic><topic>Respiratory diseases</topic><topic>Skin cancer</topic><topic>Small cell lung cancer</topic><topic>Survival</topic><topic>Treatment Outcome</topic><topic>Xeroderma pigmentosum</topic><topic>Xeroderma Pigmentosum Group D Protein - genetics</topic><topic>XPD protein</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wu, Wenting</creatorcontrib><creatorcontrib>Li, Huan</creatorcontrib><creatorcontrib>Wang, Huibo</creatorcontrib><creatorcontrib>Zhao, Xueying</creatorcontrib><creatorcontrib>Gao, Zhiqiang</creatorcontrib><creatorcontrib>Qiao, Rong</creatorcontrib><creatorcontrib>Zhang, Wei</creatorcontrib><creatorcontrib>Qian, Ji</creatorcontrib><creatorcontrib>Wang, Jiucun</creatorcontrib><creatorcontrib>Chen, Hongyan</creatorcontrib><creatorcontrib>Wei, Qingyi</creatorcontrib><creatorcontrib>Han, Baohui</creatorcontrib><creatorcontrib>Lu, Daru</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Opposing Viewpoints</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Nursing &amp; Allied Health Database</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Meteorological &amp; Geoastrophysical Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science &amp; Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies &amp; Aerospace Collection</collection><collection>Agricultural &amp; Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>Nursing &amp; Allied Health Database (Alumni Edition)</collection><collection>Meteorological &amp; Geoastrophysical Abstracts - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wu, Wenting</au><au>Li, Huan</au><au>Wang, Huibo</au><au>Zhao, Xueying</au><au>Gao, Zhiqiang</au><au>Qiao, Rong</au><au>Zhang, Wei</au><au>Qian, Ji</au><au>Wang, Jiucun</au><au>Chen, Hongyan</au><au>Wei, Qingyi</au><au>Han, Baohui</au><au>Lu, Daru</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Effect of polymorphisms in XPD on clinical outcomes of platinum-based chemotherapy for Chinese non-small cell lung cancer patients</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2012-03-29</date><risdate>2012</risdate><volume>7</volume><issue>3</issue><spage>e33200</spage><epage>e33200</epage><pages>e33200-e33200</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Xeroderma pigmentosum group D (XPD) codes for a DNA helicase involved in nucleotide excision repair that removes platinum-induced DNA damage. Genetic polymorphisms of XPD may affect DNA repair capacity and lead to individual differences in the outcome of patients after chemotherapy. This study aims to identify whether XPD polymorphisms affect clinical efficacy among advanced non-small cell lung cancer (NSCLC) patients treated with platinum-based chemotherapy. 353 stage III-IV NSCLC patients receiving platinum-based chemotherapy as the first-line treatment were enrolled in this study. Four potentially functional XPD polymorphisms (Arg(156)Arg, Asp(312)Asn, Asp(711)Asp and Lys(751)Gln) were genotyped by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry or PCR-based sequencing. Variant genotypes of XPD Asp(312)Asn, Asp(711)Asp and Lys(751)Gln were significantly associated with poorer NSCLC survival (P = 0.006, 0.006, 0.014, respectively, by log-rank test). The most common haplotype GCA (in order of Asp(312)Asn, Asp(711)Asp and Lys(751)Gln) also exhibited significant risk effect on NSCLC survival (log-rank P = 0.001). This effect was more predominant for patients with stage IIIB disease (P = 2.21×10(-4), log-rank test). Increased risks for variant haplotypes of XPD were also observed among patients with performance status of 0-1 and patients with adenocarcinoma. However, no significant associations were found between these polymorphisms, chemotherapy response and PFS. Our study provides evidence for the predictive role of XPD Asp(312)Asn, Asp(711)Asp and Lys(751)Gln polymorphisms/haplotype on NSCLC prognosis in inoperable advanced NSCLC patients treated with platinum-based chemotherapy.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>22479369</pmid><doi>10.1371/journal.pone.0033200</doi><oa>free_for_read</oa></addata></record>
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subjects Adenocarcinoma
Adult
Aged
Aged, 80 and over
Antineoplastic Combined Chemotherapy Protocols - therapeutic use
Apoptosis
Asian Continental Ancestry Group - genetics
Biology
Cancer
Cancer therapies
Carboplatin - administration & dosage
Carcinoma, Non-Small-Cell Lung - drug therapy
Carcinoma, Non-Small-Cell Lung - ethnology
Carcinoma, Non-Small-Cell Lung - genetics
Care and treatment
Chemotherapy
China
Cisplatin - administration & dosage
Clinical outcomes
Deoxyribonucleic acid
Disease
Disease-Free Survival
DNA
DNA damage
DNA helicase
DNA repair
Drug Administration Schedule
Epidemiology
Experimental design
Female
Gene Frequency
Genetic aspects
Genetic engineering
Genetic polymorphisms
Genetic testing
Genotype
Genotypes
Glutamine
Haplotypes
Humans
Influence
Ionization
Laboratories
Life sciences
Lung cancer
Lung diseases
Lung Neoplasms - drug therapy
Lung Neoplasms - ethnology
Lung Neoplasms - genetics
Male
Mass spectrometry
Mass spectroscopy
Medical prognosis
Medical research
Medicine
Melanoma
Middle Aged
Multiple myeloma
Multivariate Analysis
Non-small cell lung cancer
Non-small cell lung carcinoma
Nucleotide excision repair
Oncology
Patient outcomes
Patients
Platinum
Polymorphism, Single Nucleotide
Prognosis
Rankings
Repair
Respiratory diseases
Skin cancer
Small cell lung cancer
Survival
Treatment Outcome
Xeroderma pigmentosum
Xeroderma Pigmentosum Group D Protein - genetics
XPD protein
title Effect of polymorphisms in XPD on clinical outcomes of platinum-based chemotherapy for Chinese non-small cell lung cancer patients
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