A molecular phylogeny of bivalve mollusks: ancient radiations and divergences as revealed by mitochondrial genes
Bivalves are very ancient and successful conchiferan mollusks (both in terms of species number and geographical distribution). Despite their importance in marine biota, their deep phylogenetic relationships were scarcely investigated from a molecular perspective, whereas much valuable work has been...
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creator | Plazzi, Federico Ceregato, Alessandro Taviani, Marco Passamonti, Marco |
description | Bivalves are very ancient and successful conchiferan mollusks (both in terms of species number and geographical distribution). Despite their importance in marine biota, their deep phylogenetic relationships were scarcely investigated from a molecular perspective, whereas much valuable work has been done on taxonomy, as well as phylogeny, of lower taxa.
Here we present a class-level bivalve phylogeny with a broad sample of 122 ingroup taxa, using four mitochondrial markers (MT-RNR1, MT-RNR2, MT-CO1, MT-CYB). Rigorous techniques have been exploited to set up the dataset, analyze phylogenetic signal, and infer a single final tree. In this study, we show the basal position of Opponobranchia to all Autobranchia, as well as of Palaeoheterodonta to the remaining Autobranchia, which we here propose to call Amarsipobranchia. Anomalodesmata were retrieved as monophyletic and basal to (Heterodonta + Pteriomorphia).
Bivalve morphological characters were traced onto the phylogenetic trees obtained from the molecular analysis; our analysis suggests that eulamellibranch gills and heterodont hinge are ancestral characters for all Autobranchia. This conclusion would entail a re-evaluation of bivalve symplesiomorphies. |
doi_str_mv | 10.1371/journal.pone.0027147 |
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Bivalve morphological characters were traced onto the phylogenetic trees obtained from the molecular analysis; our analysis suggests that eulamellibranch gills and heterodont hinge are ancestral characters for all Autobranchia. This conclusion would entail a re-evaluation of bivalve symplesiomorphies.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0027147</identifier><identifier>PMID: 22069499</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Analysis ; Animals ; Background radiation ; Bayes Theorem ; Bayesian analysis ; Bioinformatics ; Biological Evolution ; Biology ; Biota ; Bivalvia ; Bivalvia - classification ; Bivalvia - genetics ; Datasets ; DNA, Mitochondrial - genetics ; Genes ; Genes, Mitochondrial - genetics ; Genetic Speciation ; Genomes ; Geographical distribution ; Gills ; Heterodonta ; Information theory ; Mitochondria ; Mollusks ; Nuculoida ; Palaeoheterodonta ; Phylogenetics ; Phylogeny ; Proteins ; Protobranchia ; Pteriomorphia ; Radiation (Physics) ; Shellfish ; Solemyoida ; Taxa ; Taxonomy</subject><ispartof>PloS one, 2011-11, Vol.6 (11), p.e27147-e27147</ispartof><rights>COPYRIGHT 2011 Public Library of Science</rights><rights>2011 Plazzi et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Plazzi et al. 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c757t-721c19526399de232232e0bd908e007b8e0a602d4ed12790a09e5041f7f706e93</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3206082/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3206082/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2102,2928,23866,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22069499$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Lalueza-Fox, Carles</contributor><creatorcontrib>Plazzi, Federico</creatorcontrib><creatorcontrib>Ceregato, Alessandro</creatorcontrib><creatorcontrib>Taviani, Marco</creatorcontrib><creatorcontrib>Passamonti, Marco</creatorcontrib><title>A molecular phylogeny of bivalve mollusks: ancient radiations and divergences as revealed by mitochondrial genes</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Bivalves are very ancient and successful conchiferan mollusks (both in terms of species number and geographical distribution). Despite their importance in marine biota, their deep phylogenetic relationships were scarcely investigated from a molecular perspective, whereas much valuable work has been done on taxonomy, as well as phylogeny, of lower taxa.
Here we present a class-level bivalve phylogeny with a broad sample of 122 ingroup taxa, using four mitochondrial markers (MT-RNR1, MT-RNR2, MT-CO1, MT-CYB). Rigorous techniques have been exploited to set up the dataset, analyze phylogenetic signal, and infer a single final tree. In this study, we show the basal position of Opponobranchia to all Autobranchia, as well as of Palaeoheterodonta to the remaining Autobranchia, which we here propose to call Amarsipobranchia. Anomalodesmata were retrieved as monophyletic and basal to (Heterodonta + Pteriomorphia).
Bivalve morphological characters were traced onto the phylogenetic trees obtained from the molecular analysis; our analysis suggests that eulamellibranch gills and heterodont hinge are ancestral characters for all Autobranchia. 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Plazzi, Federico</au><au>Ceregato, Alessandro</au><au>Taviani, Marco</au><au>Passamonti, Marco</au><au>Lalueza-Fox, Carles</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A molecular phylogeny of bivalve mollusks: ancient radiations and divergences as revealed by mitochondrial genes</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2011-11-01</date><risdate>2011</risdate><volume>6</volume><issue>11</issue><spage>e27147</spage><epage>e27147</epage><pages>e27147-e27147</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Bivalves are very ancient and successful conchiferan mollusks (both in terms of species number and geographical distribution). Despite their importance in marine biota, their deep phylogenetic relationships were scarcely investigated from a molecular perspective, whereas much valuable work has been done on taxonomy, as well as phylogeny, of lower taxa.
Here we present a class-level bivalve phylogeny with a broad sample of 122 ingroup taxa, using four mitochondrial markers (MT-RNR1, MT-RNR2, MT-CO1, MT-CYB). Rigorous techniques have been exploited to set up the dataset, analyze phylogenetic signal, and infer a single final tree. In this study, we show the basal position of Opponobranchia to all Autobranchia, as well as of Palaeoheterodonta to the remaining Autobranchia, which we here propose to call Amarsipobranchia. Anomalodesmata were retrieved as monophyletic and basal to (Heterodonta + Pteriomorphia).
Bivalve morphological characters were traced onto the phylogenetic trees obtained from the molecular analysis; our analysis suggests that eulamellibranch gills and heterodont hinge are ancestral characters for all Autobranchia. This conclusion would entail a re-evaluation of bivalve symplesiomorphies.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>22069499</pmid><doi>10.1371/journal.pone.0027147</doi><tpages>e27147</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Analysis Animals Background radiation Bayes Theorem Bayesian analysis Bioinformatics Biological Evolution Biology Biota Bivalvia Bivalvia - classification Bivalvia - genetics Datasets DNA, Mitochondrial - genetics Genes Genes, Mitochondrial - genetics Genetic Speciation Genomes Geographical distribution Gills Heterodonta Information theory Mitochondria Mollusks Nuculoida Palaeoheterodonta Phylogenetics Phylogeny Proteins Protobranchia Pteriomorphia Radiation (Physics) Shellfish Solemyoida Taxa Taxonomy |
title | A molecular phylogeny of bivalve mollusks: ancient radiations and divergences as revealed by mitochondrial genes |
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