Genetic networking of the Bemisia tabaci cryptic species complex reveals pattern of biological invasions
A challenge within the context of cryptic species is the delimitation of individual species within the complex. Statistical parsimony network analytics offers the opportunity to explore limits in situations where there are insufficient species-specific morphological characters to separate taxa. The...
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| description | A challenge within the context of cryptic species is the delimitation of individual species within the complex. Statistical parsimony network analytics offers the opportunity to explore limits in situations where there are insufficient species-specific morphological characters to separate taxa. The results also enable us to explore the spread in taxa that have invaded globally.
Using a 657 bp portion of mitochondrial cytochrome oxidase 1 from 352 unique haplotypes belonging to the Bemisia tabaci cryptic species complex, the analysis revealed 28 networks plus 7 unconnected individual haplotypes. Of the networks, 24 corresponded to the putative species identified using the rule set devised by Dinsdale et al. (2010). Only two species proposed in Dinsdale et al. (2010) departed substantially from the structure suggested by the analysis. The analysis of the two invasive members of the complex, Mediterranean (MED) and Middle East - Asia Minor 1 (MEAM1), showed that in both cases only a small number of haplotypes represent the majority that have spread beyond the home range; one MEAM1 and three MED haplotypes account for >80% of the GenBank records. Israel is a possible source of the globally invasive MEAM1 whereas MED has two possible sources. The first is the eastern Mediterranean which has invaded only the USA, primarily Florida and to a lesser extent California. The second are western Mediterranean haplotypes that have spread to the USA, Asia and South America. The structure for MED supports two home range distributions, a Sub-Saharan range and a Mediterranean range. The MEAM1 network supports the Middle East - Asia Minor region.
The network analyses show a high level of congruence with the species identified in a previous phylogenetic analysis. The analysis of the two globally invasive members of the complex support the view that global invasion often involve very small portions of the available genetic diversity. |
| doi_str_mv | 10.1371/journal.pone.0025579 |
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Using a 657 bp portion of mitochondrial cytochrome oxidase 1 from 352 unique haplotypes belonging to the Bemisia tabaci cryptic species complex, the analysis revealed 28 networks plus 7 unconnected individual haplotypes. Of the networks, 24 corresponded to the putative species identified using the rule set devised by Dinsdale et al. (2010). Only two species proposed in Dinsdale et al. (2010) departed substantially from the structure suggested by the analysis. The analysis of the two invasive members of the complex, Mediterranean (MED) and Middle East - Asia Minor 1 (MEAM1), showed that in both cases only a small number of haplotypes represent the majority that have spread beyond the home range; one MEAM1 and three MED haplotypes account for >80% of the GenBank records. Israel is a possible source of the globally invasive MEAM1 whereas MED has two possible sources. The first is the eastern Mediterranean which has invaded only the USA, primarily Florida and to a lesser extent California. The second are western Mediterranean haplotypes that have spread to the USA, Asia and South America. The structure for MED supports two home range distributions, a Sub-Saharan range and a Mediterranean range. The MEAM1 network supports the Middle East - Asia Minor region.
The network analyses show a high level of congruence with the species identified in a previous phylogenetic analysis. The analysis of the two globally invasive members of the complex support the view that global invasion often involve very small portions of the available genetic diversity.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0025579</identifier><identifier>PMID: 21998669</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Analysis ; Animals ; Bemisia tabaci ; Biogeography ; Biology ; Cladistic analysis ; Cryptic species ; Cytochrome ; Electron Transport Complex IV - genetics ; Evolution ; Flowers & plants ; Genealogy ; Genes, Insect - genetics ; Genetic diversity ; Genetic Variation - genetics ; Haplotypes ; Haplotypes - genetics ; Hemiptera - classification ; Hemiptera - genetics ; Hirschfeldia incana ; Home range ; Introduced Species ; Invasive species ; Jargon ; Mitochondria ; Mitochondria - enzymology ; Molecular Sequence Data ; Morphology ; Networking ; Nonnative species ; Oxidases ; Phylogenetics ; Phylogeny ; Phylogeography ; Plant mitochondria ; Population biology ; Styela clava ; Supports ; Taxa ; Terminology ; Wolbachia</subject><ispartof>PloS one, 2011-10, Vol.6 (10), p.e25579-e25579</ispartof><rights>COPYRIGHT 2011 Public Library of Science</rights><rights>2011 De Barro, Ahmed. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>De Barro, Ahmed. 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c691t-85bc9e7358e46db019df2670f11628392e141460cb3ecdecab14ec4038a2d3773</citedby><cites>FETCH-LOGICAL-c691t-85bc9e7358e46db019df2670f11628392e141460cb3ecdecab14ec4038a2d3773</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3184991/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3184991/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2102,2928,23866,27924,27925,53791,53793,79600,79601</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21998669$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Williams, Barry L.</contributor><creatorcontrib>De Barro, Paul</creatorcontrib><creatorcontrib>Ahmed, Muhammad Z</creatorcontrib><title>Genetic networking of the Bemisia tabaci cryptic species complex reveals pattern of biological invasions</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>A challenge within the context of cryptic species is the delimitation of individual species within the complex. Statistical parsimony network analytics offers the opportunity to explore limits in situations where there are insufficient species-specific morphological characters to separate taxa. The results also enable us to explore the spread in taxa that have invaded globally.
Using a 657 bp portion of mitochondrial cytochrome oxidase 1 from 352 unique haplotypes belonging to the Bemisia tabaci cryptic species complex, the analysis revealed 28 networks plus 7 unconnected individual haplotypes. Of the networks, 24 corresponded to the putative species identified using the rule set devised by Dinsdale et al. (2010). Only two species proposed in Dinsdale et al. (2010) departed substantially from the structure suggested by the analysis. The analysis of the two invasive members of the complex, Mediterranean (MED) and Middle East - Asia Minor 1 (MEAM1), showed that in both cases only a small number of haplotypes represent the majority that have spread beyond the home range; one MEAM1 and three MED haplotypes account for >80% of the GenBank records. Israel is a possible source of the globally invasive MEAM1 whereas MED has two possible sources. The first is the eastern Mediterranean which has invaded only the USA, primarily Florida and to a lesser extent California. The second are western Mediterranean haplotypes that have spread to the USA, Asia and South America. The structure for MED supports two home range distributions, a Sub-Saharan range and a Mediterranean range. The MEAM1 network supports the Middle East - Asia Minor region.
The network analyses show a high level of congruence with the species identified in a previous phylogenetic analysis. The analysis of the two globally invasive members of the complex support the view that global invasion often involve very small portions of the available genetic diversity.</description><subject>Analysis</subject><subject>Animals</subject><subject>Bemisia tabaci</subject><subject>Biogeography</subject><subject>Biology</subject><subject>Cladistic analysis</subject><subject>Cryptic species</subject><subject>Cytochrome</subject><subject>Electron Transport Complex IV - genetics</subject><subject>Evolution</subject><subject>Flowers & plants</subject><subject>Genealogy</subject><subject>Genes, Insect - genetics</subject><subject>Genetic diversity</subject><subject>Genetic Variation - genetics</subject><subject>Haplotypes</subject><subject>Haplotypes - genetics</subject><subject>Hemiptera - classification</subject><subject>Hemiptera - genetics</subject><subject>Hirschfeldia incana</subject><subject>Home range</subject><subject>Introduced Species</subject><subject>Invasive species</subject><subject>Jargon</subject><subject>Mitochondria</subject><subject>Mitochondria - enzymology</subject><subject>Molecular Sequence Data</subject><subject>Morphology</subject><subject>Networking</subject><subject>Nonnative species</subject><subject>Oxidases</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Phylogeography</subject><subject>Plant mitochondria</subject><subject>Population biology</subject><subject>Styela clava</subject><subject>Supports</subject><subject>Taxa</subject><subject>Terminology</subject><subject>Wolbachia</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>DOA</sourceid><recordid>eNqNk-9r1DAYx4s43Jz-B6IFQdmLO5MmTZM3whw6DwYDf70Nafq0l7PX1CQ9t__e1OvGVfZCCm1IP99vkm-eJ0leYLTEpMDvNnZwnWqXve1giVCW54V4lJxgQbIFyxB5fDA-Tp56v0EoJ5yxJ8lxhoWII3GSrC-hg2B0Gt-_rftpuia1dRrWkH6ArfFGpUGVSptUu9t-BH0P2oBPtd32LdykDnagWp_2KgRw3agujW1tY7RqU9PtlDe288-Sozpi8Hz6nibfP338dvF5cXV9ubo4v1poJnBY8LzUAgqSc6CsKhEWVZ2xAtUYs4wTkQGmmDKkSwK6Aq1KTEFTRLjKKlIU5DR5tfftW-vlFJKXmCBBcFTySKz2RGXVRvbObJW7lVYZ-XfCukYqF0_agqQlxVjVJeYEU17UXDMNMeiiwkplXEWv99NqQ7mFSkMXnGpnpvM_nVnLxu4kwZwKgaPB28nA2V8D-CBj6BraVnVgBy-54DkqEMsi-fof8uHDTVSj4v5NV9u4rB495TktGGeCFDRSyweo-FTxznUsqNrE-ZngbCaITICb0KjBe7n6-uX_2esfc_bNAbuOhRTW3rZDGEtmDtI9qJ313kF9nzFGcuyHuzTk2A9y6ocoe3l4P_eiuwYgfwD5YgaH</recordid><startdate>20111003</startdate><enddate>20111003</enddate><creator>De Barro, Paul</creator><creator>Ahmed, Muhammad Z</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20111003</creationdate><title>Genetic networking of the Bemisia tabaci cryptic species complex reveals pattern of biological invasions</title><author>De Barro, Paul ; Ahmed, Muhammad Z</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c691t-85bc9e7358e46db019df2670f11628392e141460cb3ecdecab14ec4038a2d3773</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Analysis</topic><topic>Animals</topic><topic>Bemisia tabaci</topic><topic>Biogeography</topic><topic>Biology</topic><topic>Cladistic analysis</topic><topic>Cryptic species</topic><topic>Cytochrome</topic><topic>Electron Transport Complex IV - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>De Barro, Paul</au><au>Ahmed, Muhammad Z</au><au>Williams, Barry L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic networking of the Bemisia tabaci cryptic species complex reveals pattern of biological invasions</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2011-10-03</date><risdate>2011</risdate><volume>6</volume><issue>10</issue><spage>e25579</spage><epage>e25579</epage><pages>e25579-e25579</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>A challenge within the context of cryptic species is the delimitation of individual species within the complex. Statistical parsimony network analytics offers the opportunity to explore limits in situations where there are insufficient species-specific morphological characters to separate taxa. The results also enable us to explore the spread in taxa that have invaded globally.
Using a 657 bp portion of mitochondrial cytochrome oxidase 1 from 352 unique haplotypes belonging to the Bemisia tabaci cryptic species complex, the analysis revealed 28 networks plus 7 unconnected individual haplotypes. Of the networks, 24 corresponded to the putative species identified using the rule set devised by Dinsdale et al. (2010). Only two species proposed in Dinsdale et al. (2010) departed substantially from the structure suggested by the analysis. The analysis of the two invasive members of the complex, Mediterranean (MED) and Middle East - Asia Minor 1 (MEAM1), showed that in both cases only a small number of haplotypes represent the majority that have spread beyond the home range; one MEAM1 and three MED haplotypes account for >80% of the GenBank records. Israel is a possible source of the globally invasive MEAM1 whereas MED has two possible sources. The first is the eastern Mediterranean which has invaded only the USA, primarily Florida and to a lesser extent California. The second are western Mediterranean haplotypes that have spread to the USA, Asia and South America. The structure for MED supports two home range distributions, a Sub-Saharan range and a Mediterranean range. The MEAM1 network supports the Middle East - Asia Minor region.
The network analyses show a high level of congruence with the species identified in a previous phylogenetic analysis. The analysis of the two globally invasive members of the complex support the view that global invasion often involve very small portions of the available genetic diversity.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>21998669</pmid><doi>10.1371/journal.pone.0025579</doi><tpages>e25579</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Analysis Animals Bemisia tabaci Biogeography Biology Cladistic analysis Cryptic species Cytochrome Electron Transport Complex IV - genetics Evolution Flowers & plants Genealogy Genes, Insect - genetics Genetic diversity Genetic Variation - genetics Haplotypes Haplotypes - genetics Hemiptera - classification Hemiptera - genetics Hirschfeldia incana Home range Introduced Species Invasive species Jargon Mitochondria Mitochondria - enzymology Molecular Sequence Data Morphology Networking Nonnative species Oxidases Phylogenetics Phylogeny Phylogeography Plant mitochondria Population biology Styela clava Supports Taxa Terminology Wolbachia |
| title | Genetic networking of the Bemisia tabaci cryptic species complex reveals pattern of biological invasions |
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