Interspecific Proteomic Comparisons Reveal Ash Phloem Genes Potentially Involved in Constitutive Resistance to the Emerald Ash Borer
The emerald ash borer (Agrilus planipennis) is an invasive wood-boring beetle that has killed millions of ash trees since its accidental introduction to North America. All North American ash species (Fraxinus spp.) that emerald ash borer has encountered so far are susceptible, while an Asian species...
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description | The emerald ash borer (Agrilus planipennis) is an invasive wood-boring beetle that has killed millions of ash trees since its accidental introduction to North America. All North American ash species (Fraxinus spp.) that emerald ash borer has encountered so far are susceptible, while an Asian species, Manchurian ash (F. mandshurica), which shares an evolutionary history with emerald ash borer, is resistant. Phylogenetic evidence places North American black ash (F. nigra) and Manchurian ash in the same clade and section, yet black ash is highly susceptible to the emerald ash borer. This contrast provides an opportunity to compare the genetic traits of the two species and identify those with a potential role in defense/resistance. We used Difference Gel Electrophoresis (DIGE) to compare the phloem proteomes of resistant Manchurian to susceptible black, green, and white ash. Differentially expressed proteins associated with the resistant Manchurian ash when compared to the susceptible ash species were identified using nano-LC-MS/MS and putative identities assigned. Proteomic differences were strongly associated with the phylogenetic relationships among the four species. Proteins identified in Manchurian ash potentially associated with its resistance to emerald ash borer include a PR-10 protein, an aspartic protease, a phenylcoumaran benzylic ether reductase (PCBER), and a thylakoid-bound ascorbate peroxidase. Discovery of resistance-related proteins in Asian species will inform approaches in which resistance genes can be introgressed into North American ash species. The generation of resistant North American ash genotypes can be used in forest ecosystem restoration and urban plantings following the wake of the emerald ash borer invasion. |
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A ; Popova-Butler, Alexandra ; Green-Church, Kari B ; Koch, Jennifer L ; Herms, Daniel A ; Bonello, Pierluigi ; Yang, Haibing</creator><creatorcontrib>Whitehill, Justin G. A ; Popova-Butler, Alexandra ; Green-Church, Kari B ; Koch, Jennifer L ; Herms, Daniel A ; Bonello, Pierluigi ; Yang, Haibing</creatorcontrib><description>The emerald ash borer (Agrilus planipennis) is an invasive wood-boring beetle that has killed millions of ash trees since its accidental introduction to North America. All North American ash species (Fraxinus spp.) that emerald ash borer has encountered so far are susceptible, while an Asian species, Manchurian ash (F. mandshurica), which shares an evolutionary history with emerald ash borer, is resistant. Phylogenetic evidence places North American black ash (F. nigra) and Manchurian ash in the same clade and section, yet black ash is highly susceptible to the emerald ash borer. This contrast provides an opportunity to compare the genetic traits of the two species and identify those with a potential role in defense/resistance. We used Difference Gel Electrophoresis (DIGE) to compare the phloem proteomes of resistant Manchurian to susceptible black, green, and white ash. Differentially expressed proteins associated with the resistant Manchurian ash when compared to the susceptible ash species were identified using nano-LC-MS/MS and putative identities assigned. Proteomic differences were strongly associated with the phylogenetic relationships among the four species. Proteins identified in Manchurian ash potentially associated with its resistance to emerald ash borer include a PR-10 protein, an aspartic protease, a phenylcoumaran benzylic ether reductase (PCBER), and a thylakoid-bound ascorbate peroxidase. Discovery of resistance-related proteins in Asian species will inform approaches in which resistance genes can be introgressed into North American ash species. The generation of resistant North American ash genotypes can be used in forest ecosystem restoration and urban plantings following the wake of the emerald ash borer invasion.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0024863</identifier><identifier>PMID: 21949771</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>African Americans ; Agrilus planipennis ; Animals ; ascorbate peroxidase ; Ascorbic acid ; Aspartic endopeptidase ; aspartic proteinases ; Beetles ; Beryl ; Biochemistry ; Biological evolution ; Biology ; Black ash ; Boring mills ; Chloroplasts ; Coleoptera - physiology ; Ecosystem restoration ; Ecosystems ; Electrophoresis, Gel, Two-Dimensional ; Emerald ash borer ; Endangered & extinct species ; Environmental restoration ; Enzymes ; Forest ecosystems ; forest restoration ; Fraxinus ; Fraxinus - genetics ; Fraxinus - parasitology ; Fraxinus americana ; Fraxinus nigra ; Fraxinus pennsylvanica ; Gel electrophoresis ; Gene expression ; gene expression regulation ; Genes ; Genes, Plant - genetics ; genetic traits ; Genomics ; genotype ; Genotypes ; Herbivores ; Hydrologic cycle ; Interspecific ; introgression ; Invasive insects ; L-Ascorbate peroxidase ; Laboratories ; Leaves ; Molecular Sequence Annotation ; North America ; Peroxidase ; Phloem ; Phloem - genetics ; Phylogenetics ; Phylogeny ; Physiology ; Phytochemicals ; Plant pathology ; Plant Proteins - classification ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Principal Component Analysis ; Proteases ; protein synthesis ; Proteins ; proteomics ; Proteomics - methods ; R&D ; Reductase ; Research & development ; Restoration ; Species ; Species Specificity ; Spodoptera exigua ; Spodoptera littoralis ; Terrestrial ecosystems ; Trees ; Triticum ; Trypsin - metabolism ; Wood ; Zea mays</subject><ispartof>PloS one, 2011-09, Vol.6 (9), p.e24863-e24863</ispartof><rights>COPYRIGHT 2011 Public Library of Science</rights><rights>2011. This is an open-access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>This is an open-access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication. 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c748t-22e5e9420c92c11dff4f81c6db5fe4ff3caf16e2aa052f0e7a46933070b200903</citedby><cites>FETCH-LOGICAL-c748t-22e5e9420c92c11dff4f81c6db5fe4ff3caf16e2aa052f0e7a46933070b200903</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3174216/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3174216/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79342,79343</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21949771$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Whitehill, Justin G. A</creatorcontrib><creatorcontrib>Popova-Butler, Alexandra</creatorcontrib><creatorcontrib>Green-Church, Kari B</creatorcontrib><creatorcontrib>Koch, Jennifer L</creatorcontrib><creatorcontrib>Herms, Daniel A</creatorcontrib><creatorcontrib>Bonello, Pierluigi</creatorcontrib><creatorcontrib>Yang, Haibing</creatorcontrib><title>Interspecific Proteomic Comparisons Reveal Ash Phloem Genes Potentially Involved in Constitutive Resistance to the Emerald Ash Borer</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>The emerald ash borer (Agrilus planipennis) is an invasive wood-boring beetle that has killed millions of ash trees since its accidental introduction to North America. All North American ash species (Fraxinus spp.) that emerald ash borer has encountered so far are susceptible, while an Asian species, Manchurian ash (F. mandshurica), which shares an evolutionary history with emerald ash borer, is resistant. Phylogenetic evidence places North American black ash (F. nigra) and Manchurian ash in the same clade and section, yet black ash is highly susceptible to the emerald ash borer. This contrast provides an opportunity to compare the genetic traits of the two species and identify those with a potential role in defense/resistance. We used Difference Gel Electrophoresis (DIGE) to compare the phloem proteomes of resistant Manchurian to susceptible black, green, and white ash. Differentially expressed proteins associated with the resistant Manchurian ash when compared to the susceptible ash species were identified using nano-LC-MS/MS and putative identities assigned. Proteomic differences were strongly associated with the phylogenetic relationships among the four species. Proteins identified in Manchurian ash potentially associated with its resistance to emerald ash borer include a PR-10 protein, an aspartic protease, a phenylcoumaran benzylic ether reductase (PCBER), and a thylakoid-bound ascorbate peroxidase. Discovery of resistance-related proteins in Asian species will inform approaches in which resistance genes can be introgressed into North American ash species. The generation of resistant North American ash genotypes can be used in forest ecosystem restoration and urban plantings following the wake of the emerald ash borer invasion.</description><subject>African Americans</subject><subject>Agrilus planipennis</subject><subject>Animals</subject><subject>ascorbate peroxidase</subject><subject>Ascorbic acid</subject><subject>Aspartic endopeptidase</subject><subject>aspartic proteinases</subject><subject>Beetles</subject><subject>Beryl</subject><subject>Biochemistry</subject><subject>Biological evolution</subject><subject>Biology</subject><subject>Black ash</subject><subject>Boring mills</subject><subject>Chloroplasts</subject><subject>Coleoptera - physiology</subject><subject>Ecosystem restoration</subject><subject>Ecosystems</subject><subject>Electrophoresis, Gel, Two-Dimensional</subject><subject>Emerald ash borer</subject><subject>Endangered & extinct species</subject><subject>Environmental restoration</subject><subject>Enzymes</subject><subject>Forest ecosystems</subject><subject>forest restoration</subject><subject>Fraxinus</subject><subject>Fraxinus - genetics</subject><subject>Fraxinus - parasitology</subject><subject>Fraxinus americana</subject><subject>Fraxinus nigra</subject><subject>Fraxinus pennsylvanica</subject><subject>Gel electrophoresis</subject><subject>Gene expression</subject><subject>gene expression regulation</subject><subject>Genes</subject><subject>Genes, Plant - genetics</subject><subject>genetic traits</subject><subject>Genomics</subject><subject>genotype</subject><subject>Genotypes</subject><subject>Herbivores</subject><subject>Hydrologic cycle</subject><subject>Interspecific</subject><subject>introgression</subject><subject>Invasive insects</subject><subject>L-Ascorbate peroxidase</subject><subject>Laboratories</subject><subject>Leaves</subject><subject>Molecular Sequence Annotation</subject><subject>North America</subject><subject>Peroxidase</subject><subject>Phloem</subject><subject>Phloem - genetics</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Physiology</subject><subject>Phytochemicals</subject><subject>Plant pathology</subject><subject>Plant Proteins - classification</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Principal Component Analysis</subject><subject>Proteases</subject><subject>protein synthesis</subject><subject>Proteins</subject><subject>proteomics</subject><subject>Proteomics - methods</subject><subject>R&D</subject><subject>Reductase</subject><subject>Research & development</subject><subject>Restoration</subject><subject>Species</subject><subject>Species Specificity</subject><subject>Spodoptera exigua</subject><subject>Spodoptera littoralis</subject><subject>Terrestrial ecosystems</subject><subject>Trees</subject><subject>Triticum</subject><subject>Trypsin - metabolism</subject><subject>Wood</subject><subject>Zea mays</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNqNk11rFDEUhgdRbK3-A9EBwY-LXfM1yeRGqKXWhUJLa70N2czJbspMsibZxd77w82229qVIjIXEzLPeSfnzXuq6iVGY0wF_ngZltHrfrwIHsYIEdZy-qjaxZKSESeIPr633qmepXSJUENbzp9WOwRLJoXAu9Wvic8Q0wKMs87UpzFkCENZHYRhoaNLwaf6DFag-3o_zevTeR9gqI_AQ6pPC-yz031_VU_8KvQr6GrnS61P2eVldisoxcmlrL2BOoc6z6E-HCDqvrvW-xwixOfVE6v7BC82773q4svht4Ovo-OTo8nB_vHICNbmESHQgGQEGUkMxp21zLbY8G7aWGDWUqMt5kC0Rg2xCIRmXFKKBJoShCSie9XrG91FH5LaGJgUpqht2lZyXojJDdEFfakW0Q06XqmgnbreCHGmdMzO9KBEq7FsdbG3wQyz6ZQDslPKmDBII9QVrU-bvy2nA3SmWFXa3hLd_uLdXM3CSlEsGMHrw7zbCMTwYwkpq8ElA32vPYRlUq1kLW44wYV8_0-ytI-QIBg3BX3zF_qwDxtqpkurzttQTmjWomqfCd4KKWlbqPEDVHk6KBEqubSu7G8VfNgqKEyGn3mmlympyfnZ_7Mn37fZt_fYeQlrnqfQlwCWJG6D7AY0MaQUwd5dB0ZqPVa3bqj1WKnNWJWyV_ev8q7odo7-JMvqoPSszI26OCcI8-I7FlJw-hv1jycB</recordid><startdate>20110915</startdate><enddate>20110915</enddate><creator>Whitehill, Justin G. 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Academic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Whitehill, Justin G. A</au><au>Popova-Butler, Alexandra</au><au>Green-Church, Kari B</au><au>Koch, Jennifer L</au><au>Herms, Daniel A</au><au>Bonello, Pierluigi</au><au>Yang, Haibing</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Interspecific Proteomic Comparisons Reveal Ash Phloem Genes Potentially Involved in Constitutive Resistance to the Emerald Ash Borer</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2011-09-15</date><risdate>2011</risdate><volume>6</volume><issue>9</issue><spage>e24863</spage><epage>e24863</epage><pages>e24863-e24863</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>The emerald ash borer (Agrilus planipennis) is an invasive wood-boring beetle that has killed millions of ash trees since its accidental introduction to North America. All North American ash species (Fraxinus spp.) that emerald ash borer has encountered so far are susceptible, while an Asian species, Manchurian ash (F. mandshurica), which shares an evolutionary history with emerald ash borer, is resistant. Phylogenetic evidence places North American black ash (F. nigra) and Manchurian ash in the same clade and section, yet black ash is highly susceptible to the emerald ash borer. This contrast provides an opportunity to compare the genetic traits of the two species and identify those with a potential role in defense/resistance. We used Difference Gel Electrophoresis (DIGE) to compare the phloem proteomes of resistant Manchurian to susceptible black, green, and white ash. Differentially expressed proteins associated with the resistant Manchurian ash when compared to the susceptible ash species were identified using nano-LC-MS/MS and putative identities assigned. Proteomic differences were strongly associated with the phylogenetic relationships among the four species. Proteins identified in Manchurian ash potentially associated with its resistance to emerald ash borer include a PR-10 protein, an aspartic protease, a phenylcoumaran benzylic ether reductase (PCBER), and a thylakoid-bound ascorbate peroxidase. Discovery of resistance-related proteins in Asian species will inform approaches in which resistance genes can be introgressed into North American ash species. The generation of resistant North American ash genotypes can be used in forest ecosystem restoration and urban plantings following the wake of the emerald ash borer invasion.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>21949771</pmid><doi>10.1371/journal.pone.0024863</doi><tpages>e24863</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1932-6203 |
ispartof | PloS one, 2011-09, Vol.6 (9), p.e24863-e24863 |
issn | 1932-6203 1932-6203 |
language | eng |
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source | MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; Free Full-Text Journals in Chemistry; Public Library of Science (PLoS) |
subjects | African Americans Agrilus planipennis Animals ascorbate peroxidase Ascorbic acid Aspartic endopeptidase aspartic proteinases Beetles Beryl Biochemistry Biological evolution Biology Black ash Boring mills Chloroplasts Coleoptera - physiology Ecosystem restoration Ecosystems Electrophoresis, Gel, Two-Dimensional Emerald ash borer Endangered & extinct species Environmental restoration Enzymes Forest ecosystems forest restoration Fraxinus Fraxinus - genetics Fraxinus - parasitology Fraxinus americana Fraxinus nigra Fraxinus pennsylvanica Gel electrophoresis Gene expression gene expression regulation Genes Genes, Plant - genetics genetic traits Genomics genotype Genotypes Herbivores Hydrologic cycle Interspecific introgression Invasive insects L-Ascorbate peroxidase Laboratories Leaves Molecular Sequence Annotation North America Peroxidase Phloem Phloem - genetics Phylogenetics Phylogeny Physiology Phytochemicals Plant pathology Plant Proteins - classification Plant Proteins - genetics Plant Proteins - metabolism Principal Component Analysis Proteases protein synthesis Proteins proteomics Proteomics - methods R&D Reductase Research & development Restoration Species Species Specificity Spodoptera exigua Spodoptera littoralis Terrestrial ecosystems Trees Triticum Trypsin - metabolism Wood Zea mays |
title | Interspecific Proteomic Comparisons Reveal Ash Phloem Genes Potentially Involved in Constitutive Resistance to the Emerald Ash Borer |
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