Phylogenetic and pathotypical analysis of two virulent Newcastle disease viruses isolated from domestic ducks in China
Two velogenic Newcastle disease viruses (NDV) obtained from outbreaks in domestic ducks in China were characterized in this study. Phylogenetic analysis revealed that both strains clustered with the class II viruses, with one phylogenetically close to the genotype VII NDVs and the other closer to ge...
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| Veröffentlicht in: | PloS one 2011-09, Vol.6 (9), p.e25000-e25000 |
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| creator | Zhang, Shouping Wang, Xiaoting Zhao, Changguang Liu, Dehua Hu, Yanxin Zhao, Jixun Zhang, Guozhong |
| description | Two velogenic Newcastle disease viruses (NDV) obtained from outbreaks in domestic ducks in China were characterized in this study. Phylogenetic analysis revealed that both strains clustered with the class II viruses, with one phylogenetically close to the genotype VII NDVs and the other closer to genotype IX. The deduced amino acid sequence of the cleavage site of the fusion (F) protein confirmed that both isolates contained the virulent motif (112)RRQK/RRF(117) at the cleavage site. The two NDVs had severe pathogenicity in fully susceptible chickens, resulting in 100% mortality. One of the isolates also demonstrated some pathogenicity in domestic ducks. The present study suggests that more than one genotype of NDV circulates in domestic ducks in China and viral transmission may occur among chickens and domestic ducks. |
| doi_str_mv | 10.1371/journal.pone.0025000 |
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Phylogenetic analysis revealed that both strains clustered with the class II viruses, with one phylogenetically close to the genotype VII NDVs and the other closer to genotype IX. The deduced amino acid sequence of the cleavage site of the fusion (F) protein confirmed that both isolates contained the virulent motif (112)RRQK/RRF(117) at the cleavage site. The two NDVs had severe pathogenicity in fully susceptible chickens, resulting in 100% mortality. One of the isolates also demonstrated some pathogenicity in domestic ducks. The present study suggests that more than one genotype of NDV circulates in domestic ducks in China and viral transmission may occur among chickens and domestic ducks.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0025000</identifier><identifier>PMID: 21949828</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Amino acid sequence ; Analysis ; Animal vaccines ; Animals ; Aquatic birds ; Chickens ; Chickens - genetics ; Chickens - virology ; China - epidemiology ; Cladistic analysis ; Cleavage ; Disease Outbreaks ; Disease transmission ; Ducks - genetics ; Ducks - virology ; Fusion protein ; Newcastle disease ; Newcastle Disease - epidemiology ; Newcastle Disease - pathology ; Newcastle Disease - virology ; Newcastle disease virus - genetics ; Newcastle disease virus - isolation & purification ; Newcastle disease virus - pathogenicity ; Outbreaks ; Pathogenicity ; Pathogens ; Phylogeny ; Poultry ; Reverse Transcriptase Polymerase Chain Reaction ; RNA, Messenger - genetics ; Veterinary colleges ; Veterinary Science ; Virulence (Microbiology) ; Viruses ; Waterfowl</subject><ispartof>PloS one, 2011-09, Vol.6 (9), p.e25000-e25000</ispartof><rights>COPYRIGHT 2011 Public Library of Science</rights><rights>2011 Zhang et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Zhang et al. 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c757t-c17b07ef360ad64fd8af97ac37eebbd0aeab36d13b34b752a55bdd88f7ff65583</citedby><cites>FETCH-LOGICAL-c757t-c17b07ef360ad64fd8af97ac37eebbd0aeab36d13b34b752a55bdd88f7ff65583</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3176290/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3176290/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2102,2928,23866,27924,27925,53791,53793,79600,79601</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21949828$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Subbiah, Elankumaran</contributor><creatorcontrib>Zhang, Shouping</creatorcontrib><creatorcontrib>Wang, Xiaoting</creatorcontrib><creatorcontrib>Zhao, Changguang</creatorcontrib><creatorcontrib>Liu, Dehua</creatorcontrib><creatorcontrib>Hu, Yanxin</creatorcontrib><creatorcontrib>Zhao, Jixun</creatorcontrib><creatorcontrib>Zhang, Guozhong</creatorcontrib><title>Phylogenetic and pathotypical analysis of two virulent Newcastle disease viruses isolated from domestic ducks in China</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Two velogenic Newcastle disease viruses (NDV) obtained from outbreaks in domestic ducks in China were characterized in this study. Phylogenetic analysis revealed that both strains clustered with the class II viruses, with one phylogenetically close to the genotype VII NDVs and the other closer to genotype IX. The deduced amino acid sequence of the cleavage site of the fusion (F) protein confirmed that both isolates contained the virulent motif (112)RRQK/RRF(117) at the cleavage site. The two NDVs had severe pathogenicity in fully susceptible chickens, resulting in 100% mortality. One of the isolates also demonstrated some pathogenicity in domestic ducks. The present study suggests that more than one genotype of NDV circulates in domestic ducks in China and viral transmission may occur among chickens and domestic ducks.</description><subject>Amino acid sequence</subject><subject>Analysis</subject><subject>Animal vaccines</subject><subject>Animals</subject><subject>Aquatic birds</subject><subject>Chickens</subject><subject>Chickens - genetics</subject><subject>Chickens - virology</subject><subject>China - epidemiology</subject><subject>Cladistic analysis</subject><subject>Cleavage</subject><subject>Disease Outbreaks</subject><subject>Disease transmission</subject><subject>Ducks - genetics</subject><subject>Ducks - virology</subject><subject>Fusion protein</subject><subject>Newcastle disease</subject><subject>Newcastle Disease - epidemiology</subject><subject>Newcastle Disease - pathology</subject><subject>Newcastle Disease - virology</subject><subject>Newcastle disease virus - genetics</subject><subject>Newcastle disease virus - isolation & purification</subject><subject>Newcastle disease virus - pathogenicity</subject><subject>Outbreaks</subject><subject>Pathogenicity</subject><subject>Pathogens</subject><subject>Phylogeny</subject><subject>Poultry</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>RNA, Messenger - genetics</subject><subject>Veterinary colleges</subject><subject>Veterinary Science</subject><subject>Virulence (Microbiology)</subject><subject>Viruses</subject><subject>Waterfowl</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>DOA</sourceid><recordid>eNqNk01vEzEQhlcIREvhHyBYCQnEIcFe79reC1IV8RGpooivqzVrjxMHZ52ud1Py73GatEpQD8gHWzPPvLZfe7LsOSVjygR9twhD14Ifr0KLY0KKihDyIDulNStGvCDs4cH6JHsS44KQiknOH2cnBa3LWhbyNFt_nW98mGGLvdM5tCZfQT8P_WblNPgUAL-JLubB5v11yNeuGzy2ff4FrzXE3mNuXESIeJOKGHMXg4ceTW67sMxNWGLcSptB_07JNp_MXQtPs0cWfMRn-_ks-_nxw4_J59HF5afp5PxipEUl-pGmoiECLeMEDC-tkWBrAZoJxKYxBBAaxg1lDSsbURVQVY0xUlphLa8qyc6ylzvdlQ9R7S2LijIiy4oTtiWmO8IEWKhV55bQbVQAp24CoZsp6NIFPCpTWimh4lY2WOoCpNVWUoGCcVoCh6T1fr_b0CzR6GRUB_5I9DjTurmahbViVPCiJkngzV6gC1dDMk4tXdToPbQYhqhkXUoqi7pM5Kt_yPsvt6dmkM7vWhvStnqrqc5LwaWQtBSJGt9DpWFw6XT6Xtal-FHB26OCxPT4p5_BEKOafv_2_-zlr2P29QE7R_D9PP2moXehjcdguQN1F2Ls0N55TInadsetG2rbHWrfHansxeH73BXdtgP7C-P-DdA</recordid><startdate>20110919</startdate><enddate>20110919</enddate><creator>Zhang, Shouping</creator><creator>Wang, Xiaoting</creator><creator>Zhao, Changguang</creator><creator>Liu, Dehua</creator><creator>Hu, Yanxin</creator><creator>Zhao, Jixun</creator><creator>Zhang, Guozhong</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20110919</creationdate><title>Phylogenetic and pathotypical analysis of two virulent Newcastle disease viruses isolated from domestic ducks in China</title><author>Zhang, Shouping ; Wang, Xiaoting ; Zhao, Changguang ; Liu, Dehua ; Hu, Yanxin ; Zhao, Jixun ; Zhang, Guozhong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c757t-c17b07ef360ad64fd8af97ac37eebbd0aeab36d13b34b752a55bdd88f7ff65583</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Amino acid sequence</topic><topic>Analysis</topic><topic>Animal vaccines</topic><topic>Animals</topic><topic>Aquatic birds</topic><topic>Chickens</topic><topic>Chickens - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhang, Shouping</au><au>Wang, Xiaoting</au><au>Zhao, Changguang</au><au>Liu, Dehua</au><au>Hu, Yanxin</au><au>Zhao, Jixun</au><au>Zhang, Guozhong</au><au>Subbiah, Elankumaran</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Phylogenetic and pathotypical analysis of two virulent Newcastle disease viruses isolated from domestic ducks in China</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2011-09-19</date><risdate>2011</risdate><volume>6</volume><issue>9</issue><spage>e25000</spage><epage>e25000</epage><pages>e25000-e25000</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Two velogenic Newcastle disease viruses (NDV) obtained from outbreaks in domestic ducks in China were characterized in this study. Phylogenetic analysis revealed that both strains clustered with the class II viruses, with one phylogenetically close to the genotype VII NDVs and the other closer to genotype IX. The deduced amino acid sequence of the cleavage site of the fusion (F) protein confirmed that both isolates contained the virulent motif (112)RRQK/RRF(117) at the cleavage site. The two NDVs had severe pathogenicity in fully susceptible chickens, resulting in 100% mortality. One of the isolates also demonstrated some pathogenicity in domestic ducks. The present study suggests that more than one genotype of NDV circulates in domestic ducks in China and viral transmission may occur among chickens and domestic ducks.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>21949828</pmid><doi>10.1371/journal.pone.0025000</doi><oa>free_for_read</oa></addata></record> |
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| subjects | Amino acid sequence Analysis Animal vaccines Animals Aquatic birds Chickens Chickens - genetics Chickens - virology China - epidemiology Cladistic analysis Cleavage Disease Outbreaks Disease transmission Ducks - genetics Ducks - virology Fusion protein Newcastle disease Newcastle Disease - epidemiology Newcastle Disease - pathology Newcastle Disease - virology Newcastle disease virus - genetics Newcastle disease virus - isolation & purification Newcastle disease virus - pathogenicity Outbreaks Pathogenicity Pathogens Phylogeny Poultry Reverse Transcriptase Polymerase Chain Reaction RNA, Messenger - genetics Veterinary colleges Veterinary Science Virulence (Microbiology) Viruses Waterfowl |
| title | Phylogenetic and pathotypical analysis of two virulent Newcastle disease viruses isolated from domestic ducks in China |
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