Plastid DNA diversity is higher in the island endemic Guadalupe cypress than in the continental Tecate cypress
Callitropsis guadalupensis (Guadalupe cypress) is endemic to Guadalupe Island, Mexico, where it is the dominant species of the only forest. The species has suffered declining numbers following the introduction of goats to the island over 150 years ago. Callitropsis guadalupensis is closely related t...
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| description | Callitropsis guadalupensis (Guadalupe cypress) is endemic to Guadalupe Island, Mexico, where it is the dominant species of the only forest. The species has suffered declining numbers following the introduction of goats to the island over 150 years ago. Callitropsis guadalupensis is closely related to Callitropsis forbesii (Tecate cypress), distributed in small isolated populations in mainland Baja California and southern California. The objective of the present study was to compare the genetic diversity of the island endemic to the continental species.
We measured genetic diversity in Callitropsis guadalupensis (n =54) from Guadalupe Island and in Callitropsis forbesii (n = 100) from five populations in mainland Baja California. The plastid DNA trnS-trnG spacer and the trnL-trnF region were chosen for characterization. Thirty-four haplotypes were observed, of which six were shared between both species. One of these haplotypes was also shared with three other species, Callitropsis lusitanica, Callitropsis montana, and Callitropsis stephensonii. Haplotype diversity (h) and nucleotide diversity (π) were significantly higher for Callitropsis guadalupensis (h = 0.698, π = 0.00071) than for Callitropsis forbesii (h = 0.337, π = 0.00024).
Callitropsis guadalupensis shows no evidence of a founder effect or of a genetic bottleneck, and can be added to a growing list of insular species with higher genetic diversity than their mainland relatives. |
| doi_str_mv | 10.1371/journal.pone.0016133 |
| format | Article |
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We measured genetic diversity in Callitropsis guadalupensis (n =54) from Guadalupe Island and in Callitropsis forbesii (n = 100) from five populations in mainland Baja California. The plastid DNA trnS-trnG spacer and the trnL-trnF region were chosen for characterization. Thirty-four haplotypes were observed, of which six were shared between both species. One of these haplotypes was also shared with three other species, Callitropsis lusitanica, Callitropsis montana, and Callitropsis stephensonii. Haplotype diversity (h) and nucleotide diversity (π) were significantly higher for Callitropsis guadalupensis (h = 0.698, π = 0.00071) than for Callitropsis forbesii (h = 0.337, π = 0.00024).
Callitropsis guadalupensis shows no evidence of a founder effect or of a genetic bottleneck, and can be added to a growing list of insular species with higher genetic diversity than their mainland relatives.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0016133</identifier><identifier>PMID: 21283771</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Biodiversity ; Biogeography ; Biology ; California ; Callitropsis forbesii ; Callitropsis guadalupensis ; Chloroplasts ; Cupressus - genetics ; Deoxyribonucleic acid ; DNA ; Dominant species ; Endangered & extinct species ; Founder Effect ; Genetic diversity ; Genetic research ; Genetic Variation ; Genetics, Population ; Geography ; Goats ; Guadeloupe ; Haplotypes ; Mutation ; Phylogenetics ; Plastids - genetics ; Population genetics ; Populations ; Spacer ; Species diversity</subject><ispartof>PloS one, 2011-01, Vol.6 (1), p.e16133-e16133</ispartof><rights>COPYRIGHT 2011 Public Library of Science</rights><rights>2011 Rosas Escobar et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Rosas Escobar et al. 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c790t-7d16c18608ad08005f9ba25aa70a2d170bbe628b3219ae9067a6040ebddc656e3</citedby><cites>FETCH-LOGICAL-c790t-7d16c18608ad08005f9ba25aa70a2d170bbe628b3219ae9067a6040ebddc656e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3024418/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3024418/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2102,2928,23866,27924,27925,53791,53793,79600,79601</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21283771$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Stajich, Jason E.</contributor><creatorcontrib>Rosas Escobar, Patricia</creatorcontrib><creatorcontrib>Gernandt, David S</creatorcontrib><creatorcontrib>Piñero, Daniel</creatorcontrib><creatorcontrib>Garcillán, Pedro P</creatorcontrib><title>Plastid DNA diversity is higher in the island endemic Guadalupe cypress than in the continental Tecate cypress</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Callitropsis guadalupensis (Guadalupe cypress) is endemic to Guadalupe Island, Mexico, where it is the dominant species of the only forest. The species has suffered declining numbers following the introduction of goats to the island over 150 years ago. Callitropsis guadalupensis is closely related to Callitropsis forbesii (Tecate cypress), distributed in small isolated populations in mainland Baja California and southern California. The objective of the present study was to compare the genetic diversity of the island endemic to the continental species.
We measured genetic diversity in Callitropsis guadalupensis (n =54) from Guadalupe Island and in Callitropsis forbesii (n = 100) from five populations in mainland Baja California. The plastid DNA trnS-trnG spacer and the trnL-trnF region were chosen for characterization. Thirty-four haplotypes were observed, of which six were shared between both species. One of these haplotypes was also shared with three other species, Callitropsis lusitanica, Callitropsis montana, and Callitropsis stephensonii. Haplotype diversity (h) and nucleotide diversity (π) were significantly higher for Callitropsis guadalupensis (h = 0.698, π = 0.00071) than for Callitropsis forbesii (h = 0.337, π = 0.00024).
Callitropsis guadalupensis shows no evidence of a founder effect or of a genetic bottleneck, and can be added to a growing list of insular species with higher genetic diversity than their mainland relatives.</description><subject>Biodiversity</subject><subject>Biogeography</subject><subject>Biology</subject><subject>California</subject><subject>Callitropsis forbesii</subject><subject>Callitropsis guadalupensis</subject><subject>Chloroplasts</subject><subject>Cupressus - genetics</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Dominant species</subject><subject>Endangered & extinct species</subject><subject>Founder Effect</subject><subject>Genetic diversity</subject><subject>Genetic research</subject><subject>Genetic Variation</subject><subject>Genetics, Population</subject><subject>Geography</subject><subject>Goats</subject><subject>Guadeloupe</subject><subject>Haplotypes</subject><subject>Mutation</subject><subject>Phylogenetics</subject><subject>Plastids - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rosas Escobar, Patricia</au><au>Gernandt, David S</au><au>Piñero, Daniel</au><au>Garcillán, Pedro P</au><au>Stajich, Jason E.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Plastid DNA diversity is higher in the island endemic Guadalupe cypress than in the continental Tecate cypress</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2011-01-20</date><risdate>2011</risdate><volume>6</volume><issue>1</issue><spage>e16133</spage><epage>e16133</epage><pages>e16133-e16133</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Callitropsis guadalupensis (Guadalupe cypress) is endemic to Guadalupe Island, Mexico, where it is the dominant species of the only forest. The species has suffered declining numbers following the introduction of goats to the island over 150 years ago. Callitropsis guadalupensis is closely related to Callitropsis forbesii (Tecate cypress), distributed in small isolated populations in mainland Baja California and southern California. The objective of the present study was to compare the genetic diversity of the island endemic to the continental species.
We measured genetic diversity in Callitropsis guadalupensis (n =54) from Guadalupe Island and in Callitropsis forbesii (n = 100) from five populations in mainland Baja California. The plastid DNA trnS-trnG spacer and the trnL-trnF region were chosen for characterization. Thirty-four haplotypes were observed, of which six were shared between both species. One of these haplotypes was also shared with three other species, Callitropsis lusitanica, Callitropsis montana, and Callitropsis stephensonii. Haplotype diversity (h) and nucleotide diversity (π) were significantly higher for Callitropsis guadalupensis (h = 0.698, π = 0.00071) than for Callitropsis forbesii (h = 0.337, π = 0.00024).
Callitropsis guadalupensis shows no evidence of a founder effect or of a genetic bottleneck, and can be added to a growing list of insular species with higher genetic diversity than their mainland relatives.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>21283771</pmid><doi>10.1371/journal.pone.0016133</doi><tpages>e16133</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Biodiversity Biogeography Biology California Callitropsis forbesii Callitropsis guadalupensis Chloroplasts Cupressus - genetics Deoxyribonucleic acid DNA Dominant species Endangered & extinct species Founder Effect Genetic diversity Genetic research Genetic Variation Genetics, Population Geography Goats Guadeloupe Haplotypes Mutation Phylogenetics Plastids - genetics Population genetics Populations Spacer Species diversity |
| title | Plastid DNA diversity is higher in the island endemic Guadalupe cypress than in the continental Tecate cypress |
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