Diagnosis of partial body radiation exposure in mice using peripheral blood gene expression profiles
In the event of a terrorist-mediated attack in the United States using radiological or improvised nuclear weapons, it is expected that hundreds of thousands of people could be exposed to life-threatening levels of ionizing radiation. We have recently shown that genome-wide expression analysis of the...
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description | In the event of a terrorist-mediated attack in the United States using radiological or improvised nuclear weapons, it is expected that hundreds of thousands of people could be exposed to life-threatening levels of ionizing radiation. We have recently shown that genome-wide expression analysis of the peripheral blood (PB) can generate gene expression profiles that can predict radiation exposure and distinguish the dose level of exposure following total body irradiation (TBI). However, in the event a radiation-mass casualty scenario, many victims will have heterogeneous exposure due to partial shielding and it is unknown whether PB gene expression profiles would be useful in predicting the status of partially irradiated individuals. Here, we identified gene expression profiles in the PB that were characteristic of anterior hemibody-, posterior hemibody- and single limb-irradiation at 0.5 Gy, 2 Gy and 10 Gy in C57Bl6 mice. These PB signatures predicted the radiation status of partially irradiated mice with a high level of accuracy (range 79-100%) compared to non-irradiated mice. Interestingly, PB signatures of partial body irradiation were poorly predictive of radiation status by site of injury (range 16-43%), suggesting that the PB molecular response to partial body irradiation was anatomic site specific. Importantly, PB gene signatures generated from TBI-treated mice failed completely to predict the radiation status of partially irradiated animals or non-irradiated controls. These data demonstrate that partial body irradiation, even to a single limb, generates a characteristic PB signature of radiation injury and thus may necessitate the use of multiple signatures, both partial body and total body, to accurately assess the status of an individual exposed to radiation. |
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We have recently shown that genome-wide expression analysis of the peripheral blood (PB) can generate gene expression profiles that can predict radiation exposure and distinguish the dose level of exposure following total body irradiation (TBI). However, in the event a radiation-mass casualty scenario, many victims will have heterogeneous exposure due to partial shielding and it is unknown whether PB gene expression profiles would be useful in predicting the status of partially irradiated individuals. Here, we identified gene expression profiles in the PB that were characteristic of anterior hemibody-, posterior hemibody- and single limb-irradiation at 0.5 Gy, 2 Gy and 10 Gy in C57Bl6 mice. These PB signatures predicted the radiation status of partially irradiated mice with a high level of accuracy (range 79-100%) compared to non-irradiated mice. Interestingly, PB signatures of partial body irradiation were poorly predictive of radiation status by site of injury (range 16-43%), suggesting that the PB molecular response to partial body irradiation was anatomic site specific. Importantly, PB gene signatures generated from TBI-treated mice failed completely to predict the radiation status of partially irradiated animals or non-irradiated controls. These data demonstrate that partial body irradiation, even to a single limb, generates a characteristic PB signature of radiation injury and thus may necessitate the use of multiple signatures, both partial body and total body, to accurately assess the status of an individual exposed to radiation.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0011535</identifier><identifier>PMID: 20634956</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Accuracy ; Analysis ; Animals ; Biomarkers ; Blood ; Cancer ; Diagnosis ; Dosimetry ; Drug dosages ; Exposure ; Female ; Gene expression ; Gene Expression - radiation effects ; Gene Expression Profiling - methods ; Genes ; Genetics and Genomics/Comparative Genomics ; Genetics and Genomics/Functional Genomics ; Genomes ; Genomics ; Hematology/Hematopoiesis ; House mouse ; Intubation ; Ionizing radiation ; Irradiated ; Irradiation ; Laboratories ; Leukemia ; Leukocytes, Mononuclear - radiation effects ; Medical diagnosis ; Medicine ; Mice ; Mice, Inbred C57BL ; Nuclear weapons ; Oligonucleotide Array Sequence Analysis ; Peripheral blood ; Radiation ; Radiation effects ; Radiation exposure ; Radiation injuries ; Radiation Injuries, Experimental ; Radiation shielding ; Radiation, Ionizing ; Signatures ; Stem cells ; Studies ; Tomography ; Urine ; Whole-Body Irradiation - adverse effects</subject><ispartof>PloS one, 2010-07, Vol.5 (7), p.e11535</ispartof><rights>COPYRIGHT 2010 Public Library of Science</rights><rights>2010 Meadows et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Meadows et al. 2010</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c691t-65caa49dfb9b17ea71f187f2c08fcd1cc3e91a7befff184acdb518c0b1861f013</citedby><cites>FETCH-LOGICAL-c691t-65caa49dfb9b17ea71f187f2c08fcd1cc3e91a7befff184acdb518c0b1861f013</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2902517/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2902517/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,725,778,782,862,883,2098,2917,23849,27907,27908,53774,53776,79351,79352</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20634956$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Cordes, Nils</contributor><creatorcontrib>Meadows, Sarah K</creatorcontrib><creatorcontrib>Dressman, Holly K</creatorcontrib><creatorcontrib>Daher, Pamela</creatorcontrib><creatorcontrib>Himburg, Heather</creatorcontrib><creatorcontrib>Russell, J Lauren</creatorcontrib><creatorcontrib>Doan, Phuong</creatorcontrib><creatorcontrib>Chao, Nelson J</creatorcontrib><creatorcontrib>Lucas, Joseph</creatorcontrib><creatorcontrib>Nevins, Joseph R</creatorcontrib><creatorcontrib>Chute, John P</creatorcontrib><title>Diagnosis of partial body radiation exposure in mice using peripheral blood gene expression profiles</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>In the event of a terrorist-mediated attack in the United States using radiological or improvised nuclear weapons, it is expected that hundreds of thousands of people could be exposed to life-threatening levels of ionizing radiation. We have recently shown that genome-wide expression analysis of the peripheral blood (PB) can generate gene expression profiles that can predict radiation exposure and distinguish the dose level of exposure following total body irradiation (TBI). However, in the event a radiation-mass casualty scenario, many victims will have heterogeneous exposure due to partial shielding and it is unknown whether PB gene expression profiles would be useful in predicting the status of partially irradiated individuals. Here, we identified gene expression profiles in the PB that were characteristic of anterior hemibody-, posterior hemibody- and single limb-irradiation at 0.5 Gy, 2 Gy and 10 Gy in C57Bl6 mice. These PB signatures predicted the radiation status of partially irradiated mice with a high level of accuracy (range 79-100%) compared to non-irradiated mice. Interestingly, PB signatures of partial body irradiation were poorly predictive of radiation status by site of injury (range 16-43%), suggesting that the PB molecular response to partial body irradiation was anatomic site specific. Importantly, PB gene signatures generated from TBI-treated mice failed completely to predict the radiation status of partially irradiated animals or non-irradiated controls. These data demonstrate that partial body irradiation, even to a single limb, generates a characteristic PB signature of radiation injury and thus may necessitate the use of multiple signatures, both partial body and total body, to accurately assess the status of an individual exposed to radiation.</description><subject>Accuracy</subject><subject>Analysis</subject><subject>Animals</subject><subject>Biomarkers</subject><subject>Blood</subject><subject>Cancer</subject><subject>Diagnosis</subject><subject>Dosimetry</subject><subject>Drug dosages</subject><subject>Exposure</subject><subject>Female</subject><subject>Gene expression</subject><subject>Gene Expression - radiation effects</subject><subject>Gene Expression Profiling - methods</subject><subject>Genes</subject><subject>Genetics and Genomics/Comparative Genomics</subject><subject>Genetics and Genomics/Functional Genomics</subject><subject>Genomes</subject><subject>Genomics</subject><subject>Hematology/Hematopoiesis</subject><subject>House mouse</subject><subject>Intubation</subject><subject>Ionizing radiation</subject><subject>Irradiated</subject><subject>Irradiation</subject><subject>Laboratories</subject><subject>Leukemia</subject><subject>Leukocytes, Mononuclear - radiation effects</subject><subject>Medical diagnosis</subject><subject>Medicine</subject><subject>Mice</subject><subject>Mice, Inbred C57BL</subject><subject>Nuclear weapons</subject><subject>Oligonucleotide Array Sequence Analysis</subject><subject>Peripheral blood</subject><subject>Radiation</subject><subject>Radiation effects</subject><subject>Radiation exposure</subject><subject>Radiation injuries</subject><subject>Radiation Injuries, Experimental</subject><subject>Radiation shielding</subject><subject>Radiation, Ionizing</subject><subject>Signatures</subject><subject>Stem cells</subject><subject>Studies</subject><subject>Tomography</subject><subject>Urine</subject><subject>Whole-Body Irradiation - adverse effects</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>DOA</sourceid><recordid>eNqNktuL1DAYxYso7kX_A9GCIPgwY76ml_RFWNbbwMKCt9eQy5dOhk5Tk1Z2__tNne4yBQXJQ0LyOyfh5CTJCyBroBW827nRd6Jd967DNSEABS0eJadQ02xVZoQ-PlqfJGch7AgpKCvLp8lJRkqa10V5mugPVjSdCzakzqS98IMVbSqdvk290FYM1nUp3vQujB5T26V7qzAdg-2atEdv-y36SdA6p9MGO5xgjyFMut47Y1sMz5InRrQBn8_zefLj08fvl19WV9efN5cXVytV1jCsykIJkdfayFpChaICA6wymSLMKA1KUaxBVBKNiQe5UFoWwBSRwEowBOh58urg27cu8DmgwCGrgdVlVuSR2BwI7cSO997uhb_lTlj-Z8P5hk8RqBZ5BkLIAiEvapUzKhlKJbSSDGgmNGPR6_182yj3qBV2Q4xiYbo86eyWN-43z2qSFVBFg9ezgXe_RgzDP548U42Ir7KdcdFM7W1Q_CKvKGNVRetIrf9CxaEx_lisyPQRS8HbhSAyA94MjRhD4JtvX_-fvf65ZN8csVsU7bANrh2nIoUlmB9A5V0IHs1DckD41PD7NPjUcD43PMpeHqf-ILqvNL0DOWf5bA</recordid><startdate>20100712</startdate><enddate>20100712</enddate><creator>Meadows, Sarah K</creator><creator>Dressman, Holly K</creator><creator>Daher, Pamela</creator><creator>Himburg, Heather</creator><creator>Russell, J Lauren</creator><creator>Doan, Phuong</creator><creator>Chao, Nelson J</creator><creator>Lucas, Joseph</creator><creator>Nevins, Joseph R</creator><creator>Chute, John P</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20100712</creationdate><title>Diagnosis of partial body radiation exposure in mice using peripheral blood gene expression profiles</title><author>Meadows, Sarah K ; Dressman, Holly K ; Daher, Pamela ; Himburg, Heather ; Russell, J Lauren ; Doan, Phuong ; Chao, Nelson J ; Lucas, Joseph ; Nevins, Joseph R ; Chute, John P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c691t-65caa49dfb9b17ea71f187f2c08fcd1cc3e91a7befff184acdb518c0b1861f013</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Accuracy</topic><topic>Analysis</topic><topic>Animals</topic><topic>Biomarkers</topic><topic>Blood</topic><topic>Cancer</topic><topic>Diagnosis</topic><topic>Dosimetry</topic><topic>Drug dosages</topic><topic>Exposure</topic><topic>Female</topic><topic>Gene expression</topic><topic>Gene Expression - 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We have recently shown that genome-wide expression analysis of the peripheral blood (PB) can generate gene expression profiles that can predict radiation exposure and distinguish the dose level of exposure following total body irradiation (TBI). However, in the event a radiation-mass casualty scenario, many victims will have heterogeneous exposure due to partial shielding and it is unknown whether PB gene expression profiles would be useful in predicting the status of partially irradiated individuals. Here, we identified gene expression profiles in the PB that were characteristic of anterior hemibody-, posterior hemibody- and single limb-irradiation at 0.5 Gy, 2 Gy and 10 Gy in C57Bl6 mice. These PB signatures predicted the radiation status of partially irradiated mice with a high level of accuracy (range 79-100%) compared to non-irradiated mice. Interestingly, PB signatures of partial body irradiation were poorly predictive of radiation status by site of injury (range 16-43%), suggesting that the PB molecular response to partial body irradiation was anatomic site specific. Importantly, PB gene signatures generated from TBI-treated mice failed completely to predict the radiation status of partially irradiated animals or non-irradiated controls. These data demonstrate that partial body irradiation, even to a single limb, generates a characteristic PB signature of radiation injury and thus may necessitate the use of multiple signatures, both partial body and total body, to accurately assess the status of an individual exposed to radiation.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>20634956</pmid><doi>10.1371/journal.pone.0011535</doi><tpages>e11535</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Accuracy Analysis Animals Biomarkers Blood Cancer Diagnosis Dosimetry Drug dosages Exposure Female Gene expression Gene Expression - radiation effects Gene Expression Profiling - methods Genes Genetics and Genomics/Comparative Genomics Genetics and Genomics/Functional Genomics Genomes Genomics Hematology/Hematopoiesis House mouse Intubation Ionizing radiation Irradiated Irradiation Laboratories Leukemia Leukocytes, Mononuclear - radiation effects Medical diagnosis Medicine Mice Mice, Inbred C57BL Nuclear weapons Oligonucleotide Array Sequence Analysis Peripheral blood Radiation Radiation effects Radiation exposure Radiation injuries Radiation Injuries, Experimental Radiation shielding Radiation, Ionizing Signatures Stem cells Studies Tomography Urine Whole-Body Irradiation - adverse effects |
title | Diagnosis of partial body radiation exposure in mice using peripheral blood gene expression profiles |
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