Biodegradation of chlorpyrifos by Enterobacter strain B-14 and its use in bioremediation of contaminated soils
Six chlorpyrifos-degrading bacteria were isolated from an Australian soil and compared by biochemical and molecular methods. The isolates were indistinguishable, and one (strain B-14) was selected for further analysis. This strain showed greatest similarity to members of the order Enterobacteriales...
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description | Six chlorpyrifos-degrading bacteria were isolated from an Australian soil and compared by biochemical and molecular methods. The isolates were indistinguishable, and one (strain B-14) was selected for further analysis. This strain showed greatest similarity to members of the order Enterobacteriales and was closest to members of the Enterobacter asburiae group. The ability of the strain to mineralize chlorpyrifos was investigated under different culture conditions, and the strain utilized chlorpyrifos as the sole source of carbon and phosphorus. Studies with ring or uniformly labeled [14C]chlorpyrifos in liquid culture demonstrated that the isolate hydrolyzed chlorpyrifos to diethylthiophospshate (DETP) and 3, 5, 6-trichloro-2-pyridinol, and utilized DETP for growth and energy. The isolate was found to possess mono- and diphosphatase activities along with a phosphotriesterase activity. Addition of other sources of carbon (glucose and succinate) resulted in slowing down of the initial rate of degradation of chlorpyrifos. The isolate degraded the DETP-containing organophosphates parathion, diazinon, coumaphos, and isazofos when provided as the sole source of carbon and phosphorus, but not fenamiphos, fonofos, ethoprop, and cadusafos, which have different side chains. Studies of the molecular basis of degradation suggested that the degrading ability could be polygenic and chromosome based. Further studies revealed that the strain possessed a novel phosphotriesterase enzyme system, as the gene coding for this enzyme had a different sequence from the widely studied organophosphate-degrading gene (opd). The addition of strain B-14 (10(6) cells g-1) to soil with a low indigenous population of chlorpyrifos-degrading bacteria treated with 35 mg of chlorpyrifos kg-1 resulted in a higher degradation rate than was observed in noninoculated soils. These results highlight the potential of this bacterium to be used in the cleanup of contaminated pesticide waste in the environment. |
doi_str_mv | 10.1128/AEM.70.8.4855-4863.2004 |
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The isolates were indistinguishable, and one (strain B-14) was selected for further analysis. This strain showed greatest similarity to members of the order Enterobacteriales and was closest to members of the Enterobacter asburiae group. The ability of the strain to mineralize chlorpyrifos was investigated under different culture conditions, and the strain utilized chlorpyrifos as the sole source of carbon and phosphorus. Studies with ring or uniformly labeled [14C]chlorpyrifos in liquid culture demonstrated that the isolate hydrolyzed chlorpyrifos to diethylthiophospshate (DETP) and 3, 5, 6-trichloro-2-pyridinol, and utilized DETP for growth and energy. The isolate was found to possess mono- and diphosphatase activities along with a phosphotriesterase activity. Addition of other sources of carbon (glucose and succinate) resulted in slowing down of the initial rate of degradation of chlorpyrifos. The isolate degraded the DETP-containing organophosphates parathion, diazinon, coumaphos, and isazofos when provided as the sole source of carbon and phosphorus, but not fenamiphos, fonofos, ethoprop, and cadusafos, which have different side chains. Studies of the molecular basis of degradation suggested that the degrading ability could be polygenic and chromosome based. Further studies revealed that the strain possessed a novel phosphotriesterase enzyme system, as the gene coding for this enzyme had a different sequence from the widely studied organophosphate-degrading gene (opd). The addition of strain B-14 (10(6) cells g-1) to soil with a low indigenous population of chlorpyrifos-degrading bacteria treated with 35 mg of chlorpyrifos kg-1 resulted in a higher degradation rate than was observed in noninoculated soils. These results highlight the potential of this bacterium to be used in the cleanup of contaminated pesticide waste in the environment.</description><identifier>ISSN: 0099-2240</identifier><identifier>EISSN: 1098-5336</identifier><identifier>DOI: 10.1128/AEM.70.8.4855-4863.2004</identifier><identifier>PMID: 15294824</identifier><identifier>CODEN: AEMIDF</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Biodegradation ; Biodegradation of pollutants ; Biodegradation, Environmental ; Biological and medical sciences ; bioremediation ; Biotechnology ; chlorpyrifos ; Chlorpyrifos - metabolism ; Culture Media ; DNA, Ribosomal - analysis ; Enterobacter ; Enterobacter - genetics ; Enterobacter - growth & development ; Enterobacter - isolation & purification ; Enterobacter - metabolism ; Enterobacter asburiae ; Environment and pollution ; Freshwater ; Fundamental and applied biological sciences. Psychology ; genes ; Industrial applications and implications. Economical aspects ; insecticide residues ; Insecticides - metabolism ; Microbiology ; mineralization ; Molecular Sequence Data ; nucleotide sequences ; polluted soils ; ribosomal RNA ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; soil bacteria ; Soil Microbiology ; Soil Pollutants - metabolism ; soil pollution</subject><ispartof>Applied and Environmental Microbiology, 2004-08, Vol.70 (8), p.4855-4863</ispartof><rights>2005 INIST-CNRS</rights><rights>Copyright © 2004, American Society for Microbiology 2004</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c591t-fc523814eea74e22d6d0c6c720c96d1208b200dc9729255d044dc976683308403</citedby><cites>FETCH-LOGICAL-c591t-fc523814eea74e22d6d0c6c720c96d1208b200dc9729255d044dc976683308403</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC492451/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC492451/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,724,777,781,882,3175,3176,27905,27906,53772,53774</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=16006524$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15294824$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Singh, B.K</creatorcontrib><creatorcontrib>Walker, A</creatorcontrib><creatorcontrib>Morgan, J.A.W</creatorcontrib><creatorcontrib>Wright, D.J</creatorcontrib><title>Biodegradation of chlorpyrifos by Enterobacter strain B-14 and its use in bioremediation of contaminated soils</title><title>Applied and Environmental Microbiology</title><addtitle>Appl Environ Microbiol</addtitle><description>Six chlorpyrifos-degrading bacteria were isolated from an Australian soil and compared by biochemical and molecular methods. The isolates were indistinguishable, and one (strain B-14) was selected for further analysis. This strain showed greatest similarity to members of the order Enterobacteriales and was closest to members of the Enterobacter asburiae group. The ability of the strain to mineralize chlorpyrifos was investigated under different culture conditions, and the strain utilized chlorpyrifos as the sole source of carbon and phosphorus. Studies with ring or uniformly labeled [14C]chlorpyrifos in liquid culture demonstrated that the isolate hydrolyzed chlorpyrifos to diethylthiophospshate (DETP) and 3, 5, 6-trichloro-2-pyridinol, and utilized DETP for growth and energy. The isolate was found to possess mono- and diphosphatase activities along with a phosphotriesterase activity. Addition of other sources of carbon (glucose and succinate) resulted in slowing down of the initial rate of degradation of chlorpyrifos. The isolate degraded the DETP-containing organophosphates parathion, diazinon, coumaphos, and isazofos when provided as the sole source of carbon and phosphorus, but not fenamiphos, fonofos, ethoprop, and cadusafos, which have different side chains. Studies of the molecular basis of degradation suggested that the degrading ability could be polygenic and chromosome based. Further studies revealed that the strain possessed a novel phosphotriesterase enzyme system, as the gene coding for this enzyme had a different sequence from the widely studied organophosphate-degrading gene (opd). The addition of strain B-14 (10(6) cells g-1) to soil with a low indigenous population of chlorpyrifos-degrading bacteria treated with 35 mg of chlorpyrifos kg-1 resulted in a higher degradation rate than was observed in noninoculated soils. These results highlight the potential of this bacterium to be used in the cleanup of contaminated pesticide waste in the environment.</description><subject>Biodegradation</subject><subject>Biodegradation of pollutants</subject><subject>Biodegradation, Environmental</subject><subject>Biological and medical sciences</subject><subject>bioremediation</subject><subject>Biotechnology</subject><subject>chlorpyrifos</subject><subject>Chlorpyrifos - metabolism</subject><subject>Culture Media</subject><subject>DNA, Ribosomal - analysis</subject><subject>Enterobacter</subject><subject>Enterobacter - genetics</subject><subject>Enterobacter - growth & development</subject><subject>Enterobacter - isolation & purification</subject><subject>Enterobacter - metabolism</subject><subject>Enterobacter asburiae</subject><subject>Environment and pollution</subject><subject>Freshwater</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genes</subject><subject>Industrial applications and implications. Economical aspects</subject><subject>insecticide residues</subject><subject>Insecticides - metabolism</subject><subject>Microbiology</subject><subject>mineralization</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequences</subject><subject>polluted soils</subject><subject>ribosomal RNA</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>soil bacteria</subject><subject>Soil Microbiology</subject><subject>Soil Pollutants - metabolism</subject><subject>soil pollution</subject><issn>0099-2240</issn><issn>1098-5336</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkkuP0zAUhSMEYsrAX2DMAnYJ16_EXrCYGZWHNIgFzNpybKc1Suxip4P673FoRWHHwrqy_Z3je3VcVVcYGoyJeHu9_tx00IiGCc5rJlraEAD2qFphkKLmlLaPqxWAlDUhDC6qZzl_h0JAK55WF5gTyQRhqyrc-GjdJmmrZx8DigMy2zGm3SH5IWbUH9A6zC7FXptSUJ6T9gHd1JghHSzyc0b77FA5631MbnLWn51imPXkg56dRTn6MT-vngx6zO7FqV5W9-_X324_1ndfPny6vb6rDZd4rgfDCRWYOac75gixrQXTmo6Aka3FBERfxrVGdkQSzi0wtmzaVlAKggG9rN4dfXf7vrRkXCh9j2qX_KTTQUXt1b83wW_VJj4oJgnjuOjfnPQp_ti7PKvJZ-PGUQcX91lhKQEo-w-QddCVVcDuCJoUc05u-NMMBrVkqkqmqgMl1JKpWjJVS6ZF-fLvWc66U4gFeH0CdDZ6HJIOxucz1wK0_Df36sht_Wb70yendJ6UdtP52cJcHZlBR6U3qfjcfyWAaflLxaMj9Bc4cb-i</recordid><startdate>20040801</startdate><enddate>20040801</enddate><creator>Singh, B.K</creator><creator>Walker, A</creator><creator>Morgan, J.A.W</creator><creator>Wright, D.J</creator><general>American Society for Microbiology</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7ST</scope><scope>C1K</scope><scope>SOI</scope><scope>7QL</scope><scope>7QO</scope><scope>7T7</scope><scope>7TV</scope><scope>8FD</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>H97</scope><scope>L.G</scope><scope>P64</scope><scope>5PM</scope></search><sort><creationdate>20040801</creationdate><title>Biodegradation of chlorpyrifos by Enterobacter strain B-14 and its use in bioremediation of contaminated soils</title><author>Singh, B.K ; Walker, A ; Morgan, J.A.W ; Wright, D.J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c591t-fc523814eea74e22d6d0c6c720c96d1208b200dc9729255d044dc976683308403</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Biodegradation</topic><topic>Biodegradation of pollutants</topic><topic>Biodegradation, Environmental</topic><topic>Biological and medical sciences</topic><topic>bioremediation</topic><topic>Biotechnology</topic><topic>chlorpyrifos</topic><topic>Chlorpyrifos - metabolism</topic><topic>Culture Media</topic><topic>DNA, Ribosomal - analysis</topic><topic>Enterobacter</topic><topic>Enterobacter - genetics</topic><topic>Enterobacter - growth & development</topic><topic>Enterobacter - isolation & purification</topic><topic>Enterobacter - metabolism</topic><topic>Enterobacter asburiae</topic><topic>Environment and pollution</topic><topic>Freshwater</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>genes</topic><topic>Industrial applications and implications. Economical aspects</topic><topic>insecticide residues</topic><topic>Insecticides - metabolism</topic><topic>Microbiology</topic><topic>mineralization</topic><topic>Molecular Sequence Data</topic><topic>nucleotide sequences</topic><topic>polluted soils</topic><topic>ribosomal RNA</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>soil bacteria</topic><topic>Soil Microbiology</topic><topic>Soil Pollutants - metabolism</topic><topic>soil pollution</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Singh, B.K</creatorcontrib><creatorcontrib>Walker, A</creatorcontrib><creatorcontrib>Morgan, J.A.W</creatorcontrib><creatorcontrib>Wright, D.J</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Environment Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Environment Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Pollution Abstracts</collection><collection>Technology Research Database</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Applied and Environmental Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Singh, B.K</au><au>Walker, A</au><au>Morgan, J.A.W</au><au>Wright, D.J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Biodegradation of chlorpyrifos by Enterobacter strain B-14 and its use in bioremediation of contaminated soils</atitle><jtitle>Applied and Environmental Microbiology</jtitle><addtitle>Appl Environ Microbiol</addtitle><date>2004-08-01</date><risdate>2004</risdate><volume>70</volume><issue>8</issue><spage>4855</spage><epage>4863</epage><pages>4855-4863</pages><issn>0099-2240</issn><eissn>1098-5336</eissn><coden>AEMIDF</coden><abstract>Six chlorpyrifos-degrading bacteria were isolated from an Australian soil and compared by biochemical and molecular methods. The isolates were indistinguishable, and one (strain B-14) was selected for further analysis. This strain showed greatest similarity to members of the order Enterobacteriales and was closest to members of the Enterobacter asburiae group. The ability of the strain to mineralize chlorpyrifos was investigated under different culture conditions, and the strain utilized chlorpyrifos as the sole source of carbon and phosphorus. Studies with ring or uniformly labeled [14C]chlorpyrifos in liquid culture demonstrated that the isolate hydrolyzed chlorpyrifos to diethylthiophospshate (DETP) and 3, 5, 6-trichloro-2-pyridinol, and utilized DETP for growth and energy. The isolate was found to possess mono- and diphosphatase activities along with a phosphotriesterase activity. Addition of other sources of carbon (glucose and succinate) resulted in slowing down of the initial rate of degradation of chlorpyrifos. The isolate degraded the DETP-containing organophosphates parathion, diazinon, coumaphos, and isazofos when provided as the sole source of carbon and phosphorus, but not fenamiphos, fonofos, ethoprop, and cadusafos, which have different side chains. Studies of the molecular basis of degradation suggested that the degrading ability could be polygenic and chromosome based. Further studies revealed that the strain possessed a novel phosphotriesterase enzyme system, as the gene coding for this enzyme had a different sequence from the widely studied organophosphate-degrading gene (opd). The addition of strain B-14 (10(6) cells g-1) to soil with a low indigenous population of chlorpyrifos-degrading bacteria treated with 35 mg of chlorpyrifos kg-1 resulted in a higher degradation rate than was observed in noninoculated soils. These results highlight the potential of this bacterium to be used in the cleanup of contaminated pesticide waste in the environment.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>15294824</pmid><doi>10.1128/AEM.70.8.4855-4863.2004</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Biodegradation Biodegradation of pollutants Biodegradation, Environmental Biological and medical sciences bioremediation Biotechnology chlorpyrifos Chlorpyrifos - metabolism Culture Media DNA, Ribosomal - analysis Enterobacter Enterobacter - genetics Enterobacter - growth & development Enterobacter - isolation & purification Enterobacter - metabolism Enterobacter asburiae Environment and pollution Freshwater Fundamental and applied biological sciences. Psychology genes Industrial applications and implications. Economical aspects insecticide residues Insecticides - metabolism Microbiology mineralization Molecular Sequence Data nucleotide sequences polluted soils ribosomal RNA RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA soil bacteria Soil Microbiology Soil Pollutants - metabolism soil pollution |
title | Biodegradation of chlorpyrifos by Enterobacter strain B-14 and its use in bioremediation of contaminated soils |
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