A SAT-Based Approach to Multiple Sequence Alignment

Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. This paper describes a new integer program formulation that generates models small enough to be passed to generic solvers...

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Bibliographische Detailangaben

Hauptverfasser:	Prestwich, Steven, Higgins, Des, O’Sullivan, Orla
Format:	Buchkapitel
Sprache:	eng
Schlagworte:	Applied sciences Calponin Homology Calponin Homology Domain Exact sciences and technology Generic Solver Mathematical programming Matrix Column Multiple Sequence Alignment Operational research and scientific management Operational research. Management science
Online-Zugang:	Volltext
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