Iron oxyhydroxide mineralization on microbial extracellular polysaccharides
Iron biominerals can form in neutral pH microaerophilic environments where microbes both catalyze iron oxidation and create polymers that localize mineral precipitation. In order to classify the microbial polymers that influence FeOOH mineralogy, we studied the organic and mineral components of biom...
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Veröffentlicht in: | Geochimica et cosmochimica acta 2010-06, Vol.73 |
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description | Iron biominerals can form in neutral pH microaerophilic environments where microbes both catalyze iron oxidation and create polymers that localize mineral precipitation. In order to classify the microbial polymers that influence FeOOH mineralogy, we studied the organic and mineral components of biominerals using scanning transmission X-ray microscopy (STXM), micro X-ray fluorescence ({mu}XRF) microscopy, and high-resolution transmission electron microscopy (HRTEM). We focused on iron microbial mat samples from a creek and abandoned mine; these samples are dominated by iron oxyhydroxide-coated structures with sheath, stalk, and filament morphologies. In addition, we characterized the mineralized products of an iron-oxidizing, stalk-forming bacterial culture isolated from the mine. In both natural and cultured samples, microbial polymers were found to be acidic polysaccharides with carboxyl functional groups, strongly spatially correlated with iron oxyhydroxide distribution patterns. Organic fibrils collect FeOOH and control its recrystallization, in some cases resulting in oriented crystals with high aspect ratios. The impact of polymers is particularly pronounced as the materials age. Synthesis experiments designed to mimic the biomineralization processes show that the polysaccharide carboxyl groups bind dissolved iron strongly but release it as mineralization proceeds. Our results suggest that carboxyl groups of acidic polysaccharides are produced by different microorganisms to create a wide range of iron oxyhydroxide biomineral structures. The intimate and potentially long-term association controls the crystal growth, phase, and reactivity of iron oxyhydroxide nanoparticles in natural systems. |
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(LBNL), Berkeley, CA (United States)</creatorcontrib><description>Iron biominerals can form in neutral pH microaerophilic environments where microbes both catalyze iron oxidation and create polymers that localize mineral precipitation. In order to classify the microbial polymers that influence FeOOH mineralogy, we studied the organic and mineral components of biominerals using scanning transmission X-ray microscopy (STXM), micro X-ray fluorescence ({mu}XRF) microscopy, and high-resolution transmission electron microscopy (HRTEM). We focused on iron microbial mat samples from a creek and abandoned mine; these samples are dominated by iron oxyhydroxide-coated structures with sheath, stalk, and filament morphologies. In addition, we characterized the mineralized products of an iron-oxidizing, stalk-forming bacterial culture isolated from the mine. In both natural and cultured samples, microbial polymers were found to be acidic polysaccharides with carboxyl functional groups, strongly spatially correlated with iron oxyhydroxide distribution patterns. Organic fibrils collect FeOOH and control its recrystallization, in some cases resulting in oriented crystals with high aspect ratios. The impact of polymers is particularly pronounced as the materials age. Synthesis experiments designed to mimic the biomineralization processes show that the polysaccharide carboxyl groups bind dissolved iron strongly but release it as mineralization proceeds. Our results suggest that carboxyl groups of acidic polysaccharides are produced by different microorganisms to create a wide range of iron oxyhydroxide biomineral structures. The intimate and potentially long-term association controls the crystal growth, phase, and reactivity of iron oxyhydroxide nanoparticles in natural systems.</description><identifier>ISSN: 0016-7037</identifier><identifier>EISSN: 1872-9533</identifier><language>eng</language><publisher>United States</publisher><subject>54 ; ASPECT RATIO ; CRYSTAL GROWTH ; DISTRIBUTION ; FLUORESCENCE ; FUNCTIONALS ; IRON ; MICROORGANISMS ; MICROSCOPY ; MINERALIZATION ; MINERALOGY ; OXIDATION ; POLYMERS ; POLYSACCHARIDES ; PRECIPITATION ; RECRYSTALLIZATION ; SYNTHESIS ; TRANSMISSION ELECTRON MICROSCOPY</subject><ispartof>Geochimica et cosmochimica acta, 2010-06, Vol.73</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881</link.rule.ids><backlink>$$Uhttps://www.osti.gov/servlets/purl/984966$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Chan, Clara S.</creatorcontrib><creatorcontrib>Fakra, Sirine C.</creatorcontrib><creatorcontrib>Edwards, David C.</creatorcontrib><creatorcontrib>Emerson, David</creatorcontrib><creatorcontrib>Banfield, Jillian F.</creatorcontrib><creatorcontrib>Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)</creatorcontrib><title>Iron oxyhydroxide mineralization on microbial extracellular polysaccharides</title><title>Geochimica et cosmochimica acta</title><description>Iron biominerals can form in neutral pH microaerophilic environments where microbes both catalyze iron oxidation and create polymers that localize mineral precipitation. In order to classify the microbial polymers that influence FeOOH mineralogy, we studied the organic and mineral components of biominerals using scanning transmission X-ray microscopy (STXM), micro X-ray fluorescence ({mu}XRF) microscopy, and high-resolution transmission electron microscopy (HRTEM). We focused on iron microbial mat samples from a creek and abandoned mine; these samples are dominated by iron oxyhydroxide-coated structures with sheath, stalk, and filament morphologies. In addition, we characterized the mineralized products of an iron-oxidizing, stalk-forming bacterial culture isolated from the mine. In both natural and cultured samples, microbial polymers were found to be acidic polysaccharides with carboxyl functional groups, strongly spatially correlated with iron oxyhydroxide distribution patterns. Organic fibrils collect FeOOH and control its recrystallization, in some cases resulting in oriented crystals with high aspect ratios. The impact of polymers is particularly pronounced as the materials age. Synthesis experiments designed to mimic the biomineralization processes show that the polysaccharide carboxyl groups bind dissolved iron strongly but release it as mineralization proceeds. Our results suggest that carboxyl groups of acidic polysaccharides are produced by different microorganisms to create a wide range of iron oxyhydroxide biomineral structures. The intimate and potentially long-term association controls the crystal growth, phase, and reactivity of iron oxyhydroxide nanoparticles in natural systems.</description><subject>54</subject><subject>ASPECT RATIO</subject><subject>CRYSTAL GROWTH</subject><subject>DISTRIBUTION</subject><subject>FLUORESCENCE</subject><subject>FUNCTIONALS</subject><subject>IRON</subject><subject>MICROORGANISMS</subject><subject>MICROSCOPY</subject><subject>MINERALIZATION</subject><subject>MINERALOGY</subject><subject>OXIDATION</subject><subject>POLYMERS</subject><subject>POLYSACCHARIDES</subject><subject>PRECIPITATION</subject><subject>RECRYSTALLIZATION</subject><subject>SYNTHESIS</subject><subject>TRANSMISSION ELECTRON MICROSCOPY</subject><issn>0016-7037</issn><issn>1872-9533</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><recordid>eNqNi0sKwjAURYMoWD97iAsopMY27VgUxanz8voaaSTmSRKhdfVWcAGOLpxz7oQlWam2aZVLOWWJEFmRKiHVnC1CuAshVJ6LhF3OnhynfuiG1lNvWs0fxmkP1rwhmq9zI0FPjQHLdR89oLb2ZcHzJ9khAGIHfjyGFZvdwAa9_u2SbY6H6_6UUoimDmiixg7JOY2xrspdVRTyn-YD9fU_yA</recordid><startdate>20100622</startdate><enddate>20100622</enddate><creator>Chan, Clara S.</creator><creator>Fakra, Sirine C.</creator><creator>Edwards, David C.</creator><creator>Emerson, David</creator><creator>Banfield, Jillian F.</creator><scope>OIOZB</scope><scope>OTOTI</scope></search><sort><creationdate>20100622</creationdate><title>Iron oxyhydroxide mineralization on microbial extracellular polysaccharides</title><author>Chan, Clara S. ; Fakra, Sirine C. ; Edwards, David C. ; Emerson, David ; Banfield, Jillian F.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-osti_scitechconnect_9849663</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>54</topic><topic>ASPECT RATIO</topic><topic>CRYSTAL GROWTH</topic><topic>DISTRIBUTION</topic><topic>FLUORESCENCE</topic><topic>FUNCTIONALS</topic><topic>IRON</topic><topic>MICROORGANISMS</topic><topic>MICROSCOPY</topic><topic>MINERALIZATION</topic><topic>MINERALOGY</topic><topic>OXIDATION</topic><topic>POLYMERS</topic><topic>POLYSACCHARIDES</topic><topic>PRECIPITATION</topic><topic>RECRYSTALLIZATION</topic><topic>SYNTHESIS</topic><topic>TRANSMISSION ELECTRON MICROSCOPY</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chan, Clara S.</creatorcontrib><creatorcontrib>Fakra, Sirine C.</creatorcontrib><creatorcontrib>Edwards, David C.</creatorcontrib><creatorcontrib>Emerson, David</creatorcontrib><creatorcontrib>Banfield, Jillian F.</creatorcontrib><creatorcontrib>Lawrence Berkeley National Lab. 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(LBNL), Berkeley, CA (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Iron oxyhydroxide mineralization on microbial extracellular polysaccharides</atitle><jtitle>Geochimica et cosmochimica acta</jtitle><date>2010-06-22</date><risdate>2010</risdate><volume>73</volume><issn>0016-7037</issn><eissn>1872-9533</eissn><abstract>Iron biominerals can form in neutral pH microaerophilic environments where microbes both catalyze iron oxidation and create polymers that localize mineral precipitation. In order to classify the microbial polymers that influence FeOOH mineralogy, we studied the organic and mineral components of biominerals using scanning transmission X-ray microscopy (STXM), micro X-ray fluorescence ({mu}XRF) microscopy, and high-resolution transmission electron microscopy (HRTEM). We focused on iron microbial mat samples from a creek and abandoned mine; these samples are dominated by iron oxyhydroxide-coated structures with sheath, stalk, and filament morphologies. In addition, we characterized the mineralized products of an iron-oxidizing, stalk-forming bacterial culture isolated from the mine. In both natural and cultured samples, microbial polymers were found to be acidic polysaccharides with carboxyl functional groups, strongly spatially correlated with iron oxyhydroxide distribution patterns. Organic fibrils collect FeOOH and control its recrystallization, in some cases resulting in oriented crystals with high aspect ratios. The impact of polymers is particularly pronounced as the materials age. Synthesis experiments designed to mimic the biomineralization processes show that the polysaccharide carboxyl groups bind dissolved iron strongly but release it as mineralization proceeds. 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subjects | 54 ASPECT RATIO CRYSTAL GROWTH DISTRIBUTION FLUORESCENCE FUNCTIONALS IRON MICROORGANISMS MICROSCOPY MINERALIZATION MINERALOGY OXIDATION POLYMERS POLYSACCHARIDES PRECIPITATION RECRYSTALLIZATION SYNTHESIS TRANSMISSION ELECTRON MICROSCOPY |
title | Iron oxyhydroxide mineralization on microbial extracellular polysaccharides |
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