Rapid characterization of molecular chemistry, nutrient make-up and microlocation of internal seed tissue
Wheat differs from corn in biodegradation kinetics and fermentation characteristics. Wheat exhibits a relatively high rate (23% h−1) and extent (78% DM) of biodegradation, which can lead to metabolic problems such as acidosis and bloat in ruminants. The objective of this study was to rapidly charact...
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description | Wheat differs from corn in biodegradation kinetics and fermentation characteristics. Wheat exhibits a relatively high rate (23% h−1) and extent (78% DM) of biodegradation, which can lead to metabolic problems such as acidosis and bloat in ruminants. The objective of this study was to rapidly characterize the molecular chemistry of the internal structure of wheat (cv. AC Barrie) and reveal both its structural chemical make‐up and nutrient component matrix by analyzing the intensity and spatial distribution of molecular functional groups within the intact seed using advanced synchrotron‐powered Fourier transform infrared (FTIR) microspectroscopy. The experiment was performed at the U2B station of the National Synchrotron Light Source at Brookhaven National Laboratory, New York, USA. The wheat tissue was imaged systematically from the pericarp, seed coat, aleurone layer and endosperm under the peaks at ∼1732 (carbonyl C=O ester), 1515 (aromatic compound of lignin), 1650 (amide I), 1025 (non‐structural CHO), 1550 (amide II), 1246 (cellulosic material), 1160, 1150, 1080, 930, 860 (all CHO), 3350 (OH and NH stretching), 2928 (CH2 stretching band) and 2885 cm−1 (CH3 stretching band). Hierarchical cluster analysis and principal component analysis were applied to analyze the molecular FTIR spectra obtained from the different inherent structures within the intact wheat tissues. The results showed that, with synchrotron‐powered FTIR microspectroscopy, images of the molecular chemistry of wheat could be generated at an ultra‐spatial resolution. The features of aromatic lignin, structural and non‐structural carbohydrates, as well as nutrient make‐up and interactions in the seeds, could be revealed. Both principal component analysis and hierarchical cluster analysis methods are conclusive in showing that they can discriminate and classify the different inherent structures within the seed tissue. The wheat exhibited distinguishable differences in the structural and nutrient make‐up among the pericarp, seed coat, aleurone layer and endosperm. Such information on the molecular chemistry can be used for grain‐breeding programs for selecting a superior variety of wheat targeted for food and feed purposes and for predicting wheat quality and nutritive value in humans and animals. Thus advanced synchrotron‐powered FTIR technology can provide a greater understanding of the plant–animal interface. |
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Wheat exhibits a relatively high rate (23% h−1) and extent (78% DM) of biodegradation, which can lead to metabolic problems such as acidosis and bloat in ruminants. The objective of this study was to rapidly characterize the molecular chemistry of the internal structure of wheat (cv. AC Barrie) and reveal both its structural chemical make‐up and nutrient component matrix by analyzing the intensity and spatial distribution of molecular functional groups within the intact seed using advanced synchrotron‐powered Fourier transform infrared (FTIR) microspectroscopy. The experiment was performed at the U2B station of the National Synchrotron Light Source at Brookhaven National Laboratory, New York, USA. The wheat tissue was imaged systematically from the pericarp, seed coat, aleurone layer and endosperm under the peaks at ∼1732 (carbonyl C=O ester), 1515 (aromatic compound of lignin), 1650 (amide I), 1025 (non‐structural CHO), 1550 (amide II), 1246 (cellulosic material), 1160, 1150, 1080, 930, 860 (all CHO), 3350 (OH and NH stretching), 2928 (CH2 stretching band) and 2885 cm−1 (CH3 stretching band). Hierarchical cluster analysis and principal component analysis were applied to analyze the molecular FTIR spectra obtained from the different inherent structures within the intact wheat tissues. The results showed that, with synchrotron‐powered FTIR microspectroscopy, images of the molecular chemistry of wheat could be generated at an ultra‐spatial resolution. The features of aromatic lignin, structural and non‐structural carbohydrates, as well as nutrient make‐up and interactions in the seeds, could be revealed. Both principal component analysis and hierarchical cluster analysis methods are conclusive in showing that they can discriminate and classify the different inherent structures within the seed tissue. The wheat exhibited distinguishable differences in the structural and nutrient make‐up among the pericarp, seed coat, aleurone layer and endosperm. Such information on the molecular chemistry can be used for grain‐breeding programs for selecting a superior variety of wheat targeted for food and feed purposes and for predicting wheat quality and nutritive value in humans and animals. Thus advanced synchrotron‐powered FTIR technology can provide a greater understanding of the plant–animal interface.</description><identifier>ISSN: 1600-5775</identifier><identifier>ISSN: 0909-0495</identifier><identifier>EISSN: 1600-5775</identifier><identifier>DOI: 10.1107/S0909049507014264</identifier><identifier>PMID: 17587665</identifier><language>eng</language><publisher>5 Abbey Square, Chester, Cheshire CH1 2HU, England: Blackwell Publishing Ltd</publisher><subject>09 BIOMASS FUELS ; ANIMALS ; AROMATICS ; BIODEGRADATION ; BNL ; CARBOHYDRATES ; CHEMISTRY ; Cluster Analysis ; ENDOSPERM ; FERMENTATION ; FOOD ; FTIR spectroscopic characteristics ; FUNCTIONALS ; INFRARED SPECTRA ; KINETICS ; LIGNIN ; molecular chemistry ; national synchrotron light source ; NSLS ; nutrient make-up ; NUTRIENTS ; PARTICLE ACCELERATORS ; Ruminantia ; RUMINANTS ; SEEDS ; Seeds - chemistry ; SPATIAL DISTRIBUTION ; SPECTROSCOPY ; Spectroscopy, Fourier Transform Infrared ; Triticum aestivum ; WHEAT</subject><ispartof>Journal of synchrotron radiation, 2007-07, Vol.14 (4), p.382-390</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5171-e7beb31b83f076c654741765935533f62573bd54b55faa211fa5b7ffd360363a3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1107%2FS0909049507014264$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1107%2FS0909049507014264$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>230,314,780,784,885,1417,11562,27924,27925,45574,45575,46052,46476</link.rule.ids><linktorsrc>$$Uhttps://onlinelibrary.wiley.com/doi/abs/10.1107%2FS0909049507014264$$EView_record_in_Wiley-Blackwell$$FView_record_in_$$GWiley-Blackwell</linktorsrc><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17587665$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/biblio/930444$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Yu, Peiqiang</creatorcontrib><creatorcontrib>Block, H.</creatorcontrib><creatorcontrib>Niu, Z.</creatorcontrib><creatorcontrib>Doiron, K.</creatorcontrib><creatorcontrib>Brookhaven National Laboratory (BNL) National Synchrotron Light Source</creatorcontrib><title>Rapid characterization of molecular chemistry, nutrient make-up and microlocation of internal seed tissue</title><title>Journal of synchrotron radiation</title><addtitle>J. Synchrotron Rad</addtitle><description>Wheat differs from corn in biodegradation kinetics and fermentation characteristics. Wheat exhibits a relatively high rate (23% h−1) and extent (78% DM) of biodegradation, which can lead to metabolic problems such as acidosis and bloat in ruminants. The objective of this study was to rapidly characterize the molecular chemistry of the internal structure of wheat (cv. AC Barrie) and reveal both its structural chemical make‐up and nutrient component matrix by analyzing the intensity and spatial distribution of molecular functional groups within the intact seed using advanced synchrotron‐powered Fourier transform infrared (FTIR) microspectroscopy. The experiment was performed at the U2B station of the National Synchrotron Light Source at Brookhaven National Laboratory, New York, USA. The wheat tissue was imaged systematically from the pericarp, seed coat, aleurone layer and endosperm under the peaks at ∼1732 (carbonyl C=O ester), 1515 (aromatic compound of lignin), 1650 (amide I), 1025 (non‐structural CHO), 1550 (amide II), 1246 (cellulosic material), 1160, 1150, 1080, 930, 860 (all CHO), 3350 (OH and NH stretching), 2928 (CH2 stretching band) and 2885 cm−1 (CH3 stretching band). Hierarchical cluster analysis and principal component analysis were applied to analyze the molecular FTIR spectra obtained from the different inherent structures within the intact wheat tissues. The results showed that, with synchrotron‐powered FTIR microspectroscopy, images of the molecular chemistry of wheat could be generated at an ultra‐spatial resolution. The features of aromatic lignin, structural and non‐structural carbohydrates, as well as nutrient make‐up and interactions in the seeds, could be revealed. Both principal component analysis and hierarchical cluster analysis methods are conclusive in showing that they can discriminate and classify the different inherent structures within the seed tissue. The wheat exhibited distinguishable differences in the structural and nutrient make‐up among the pericarp, seed coat, aleurone layer and endosperm. Such information on the molecular chemistry can be used for grain‐breeding programs for selecting a superior variety of wheat targeted for food and feed purposes and for predicting wheat quality and nutritive value in humans and animals. Thus advanced synchrotron‐powered FTIR technology can provide a greater understanding of the plant–animal interface.</description><subject>09 BIOMASS FUELS</subject><subject>ANIMALS</subject><subject>AROMATICS</subject><subject>BIODEGRADATION</subject><subject>BNL</subject><subject>CARBOHYDRATES</subject><subject>CHEMISTRY</subject><subject>Cluster Analysis</subject><subject>ENDOSPERM</subject><subject>FERMENTATION</subject><subject>FOOD</subject><subject>FTIR spectroscopic characteristics</subject><subject>FUNCTIONALS</subject><subject>INFRARED SPECTRA</subject><subject>KINETICS</subject><subject>LIGNIN</subject><subject>molecular chemistry</subject><subject>national synchrotron light source</subject><subject>NSLS</subject><subject>nutrient make-up</subject><subject>NUTRIENTS</subject><subject>PARTICLE ACCELERATORS</subject><subject>Ruminantia</subject><subject>RUMINANTS</subject><subject>SEEDS</subject><subject>Seeds - chemistry</subject><subject>SPATIAL DISTRIBUTION</subject><subject>SPECTROSCOPY</subject><subject>Spectroscopy, Fourier Transform Infrared</subject><subject>Triticum aestivum</subject><subject>WHEAT</subject><issn>1600-5775</issn><issn>0909-0495</issn><issn>1600-5775</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1v1DAQhiNERUvhB3BB4cKJwDj22MkRVVBYrVqJ5asny3Emqmk-FtsRbH89hqwKEoeVD7bk53mlmTfLnjB4yRioVxuo0xE1ggImSinuZSdMAhSoFN7_532cPQzhGwCTquQPsmOmsFJS4knmPpita3N7bbyxkby7NdFNYz51-TD1ZOfe-PRLgwvR717k4xy9ozHmg7mhYt7mZmzzwVk_9ZO9U92YokbT54GozaMLYaZH2VFn-kCP9_dp9untm49n74r15fn7s9frwiJTrCDVUMNZU_EOlLQShRJMSaw5IuedLFHxpkXRIHbGlIx1BhvVdS2XwCU3_DR7tuROITodrItkr-00jmSjrjkIIRLzfGG2fvo-U4g6zWep781I0xy0AikEA3YQ5MCgRpQHwRJYiRXUCWQLmFYWgqdOb70bjN9pBvp3q_q_VpPzdB8-NwO1f419jQmoFuCH62l3OFGvNldXG4Q_ExaLmgqmn3eq8TdaKq5Qf7k419Waf_66qle65L8AVli7wQ</recordid><startdate>200707</startdate><enddate>200707</enddate><creator>Yu, Peiqiang</creator><creator>Block, H.</creator><creator>Niu, Z.</creator><creator>Doiron, K.</creator><general>Blackwell Publishing Ltd</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>7U5</scope><scope>L7M</scope><scope>7X8</scope><scope>OTOTI</scope></search><sort><creationdate>200707</creationdate><title>Rapid characterization of molecular chemistry, nutrient make-up and microlocation of internal seed tissue</title><author>Yu, Peiqiang ; Block, H. ; Niu, Z. ; Doiron, K.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5171-e7beb31b83f076c654741765935533f62573bd54b55faa211fa5b7ffd360363a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>09 BIOMASS FUELS</topic><topic>ANIMALS</topic><topic>AROMATICS</topic><topic>BIODEGRADATION</topic><topic>BNL</topic><topic>CARBOHYDRATES</topic><topic>CHEMISTRY</topic><topic>Cluster Analysis</topic><topic>ENDOSPERM</topic><topic>FERMENTATION</topic><topic>FOOD</topic><topic>FTIR spectroscopic characteristics</topic><topic>FUNCTIONALS</topic><topic>INFRARED SPECTRA</topic><topic>KINETICS</topic><topic>LIGNIN</topic><topic>molecular chemistry</topic><topic>national synchrotron light source</topic><topic>NSLS</topic><topic>nutrient make-up</topic><topic>NUTRIENTS</topic><topic>PARTICLE ACCELERATORS</topic><topic>Ruminantia</topic><topic>RUMINANTS</topic><topic>SEEDS</topic><topic>Seeds - chemistry</topic><topic>SPATIAL DISTRIBUTION</topic><topic>SPECTROSCOPY</topic><topic>Spectroscopy, Fourier Transform Infrared</topic><topic>Triticum aestivum</topic><topic>WHEAT</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yu, Peiqiang</creatorcontrib><creatorcontrib>Block, H.</creatorcontrib><creatorcontrib>Niu, Z.</creatorcontrib><creatorcontrib>Doiron, K.</creatorcontrib><creatorcontrib>Brookhaven National Laboratory (BNL) National Synchrotron Light Source</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><collection>OSTI.GOV</collection><jtitle>Journal of synchrotron radiation</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Yu, Peiqiang</au><au>Block, H.</au><au>Niu, Z.</au><au>Doiron, K.</au><aucorp>Brookhaven National Laboratory (BNL) National Synchrotron Light Source</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Rapid characterization of molecular chemistry, nutrient make-up and microlocation of internal seed tissue</atitle><jtitle>Journal of synchrotron radiation</jtitle><addtitle>J. Synchrotron Rad</addtitle><date>2007-07</date><risdate>2007</risdate><volume>14</volume><issue>4</issue><spage>382</spage><epage>390</epage><pages>382-390</pages><issn>1600-5775</issn><issn>0909-0495</issn><eissn>1600-5775</eissn><abstract>Wheat differs from corn in biodegradation kinetics and fermentation characteristics. Wheat exhibits a relatively high rate (23% h−1) and extent (78% DM) of biodegradation, which can lead to metabolic problems such as acidosis and bloat in ruminants. The objective of this study was to rapidly characterize the molecular chemistry of the internal structure of wheat (cv. AC Barrie) and reveal both its structural chemical make‐up and nutrient component matrix by analyzing the intensity and spatial distribution of molecular functional groups within the intact seed using advanced synchrotron‐powered Fourier transform infrared (FTIR) microspectroscopy. The experiment was performed at the U2B station of the National Synchrotron Light Source at Brookhaven National Laboratory, New York, USA. The wheat tissue was imaged systematically from the pericarp, seed coat, aleurone layer and endosperm under the peaks at ∼1732 (carbonyl C=O ester), 1515 (aromatic compound of lignin), 1650 (amide I), 1025 (non‐structural CHO), 1550 (amide II), 1246 (cellulosic material), 1160, 1150, 1080, 930, 860 (all CHO), 3350 (OH and NH stretching), 2928 (CH2 stretching band) and 2885 cm−1 (CH3 stretching band). Hierarchical cluster analysis and principal component analysis were applied to analyze the molecular FTIR spectra obtained from the different inherent structures within the intact wheat tissues. The results showed that, with synchrotron‐powered FTIR microspectroscopy, images of the molecular chemistry of wheat could be generated at an ultra‐spatial resolution. The features of aromatic lignin, structural and non‐structural carbohydrates, as well as nutrient make‐up and interactions in the seeds, could be revealed. Both principal component analysis and hierarchical cluster analysis methods are conclusive in showing that they can discriminate and classify the different inherent structures within the seed tissue. The wheat exhibited distinguishable differences in the structural and nutrient make‐up among the pericarp, seed coat, aleurone layer and endosperm. Such information on the molecular chemistry can be used for grain‐breeding programs for selecting a superior variety of wheat targeted for food and feed purposes and for predicting wheat quality and nutritive value in humans and animals. Thus advanced synchrotron‐powered FTIR technology can provide a greater understanding of the plant–animal interface.</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>Blackwell Publishing Ltd</pub><pmid>17587665</pmid><doi>10.1107/S0909049507014264</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 09 BIOMASS FUELS ANIMALS AROMATICS BIODEGRADATION BNL CARBOHYDRATES CHEMISTRY Cluster Analysis ENDOSPERM FERMENTATION FOOD FTIR spectroscopic characteristics FUNCTIONALS INFRARED SPECTRA KINETICS LIGNIN molecular chemistry national synchrotron light source NSLS nutrient make-up NUTRIENTS PARTICLE ACCELERATORS Ruminantia RUMINANTS SEEDS Seeds - chemistry SPATIAL DISTRIBUTION SPECTROSCOPY Spectroscopy, Fourier Transform Infrared Triticum aestivum WHEAT |
title | Rapid characterization of molecular chemistry, nutrient make-up and microlocation of internal seed tissue |
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