Towards a unified nonlocal, peridynamics framework for the coarse-graining of molecular dynamics data with fractures
Molecular dynamics (MD) has served as a powerful tool for designing materials with reduced reliance on laboratory testing. However, the use of MD directly to treat the deformation and failure of materials at the mesoscale is still largely beyond reach. In this work, we propose a learning framework t...
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description | Molecular dynamics (MD) has served as a powerful tool for designing materials with reduced reliance on laboratory testing. However, the use of MD directly to treat the deformation and failure of materials at the mesoscale is still largely beyond reach. In this work, we propose a learning framework to extract a peridynamics model as a mesoscale continuum surrogate from MD simulated material fracture data sets. Firstly, we develop a novel coarse-graining method, to automatically handle the material fracture and its corresponding discontinuities in the MD displacement data sets. Inspired by the weighted essentially non-oscillatory (WENO) scheme, the key idea lies at an adaptive procedure to automatically choose the locally smoothest stencil, then reconstruct the coarse-grained material displacement field as the piecewise smooth solutions containing discontinuities. Then, based on the coarse-grained MD data, a two-phase optimization-based learning approach is proposed to infer the optimal peridynamics model with damage criterion. In the first phase, we identify the optimal nonlocal kernel function from the data sets without material damage to capture the material stiffness properties. Then, in the second phase, the material damage criterion is learnt as a smoothed step function from the data with fractures. As a result, a peridynamics surrogate is obtained. As a continuum model, our peridynamics surrogate model can be employed in further prediction tasks with different grid resolutions from training, and hence allows for substantial reductions in computational cost compared with MD. We illustrate the efficacy of the proposed approach with several numerical tests for the dynamic crack propagation problem in a single-layer graphene. Our tests show that the proposed data-driven model is robust and generalizable, in the sense that it is capable of modeling the initialization and growth of fractures under discretization and loading settings that are different from the ones used during training. |
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Q. ; Xu, X. ; Yu, Y. ; Silling, S. ; D’Elia, M. ; Foster, J.</creator><creatorcontrib>You, H. Q. ; Xu, X. ; Yu, Y. ; Silling, S. ; D’Elia, M. ; Foster, J. ; Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)</creatorcontrib><description>Molecular dynamics (MD) has served as a powerful tool for designing materials with reduced reliance on laboratory testing. However, the use of MD directly to treat the deformation and failure of materials at the mesoscale is still largely beyond reach. In this work, we propose a learning framework to extract a peridynamics model as a mesoscale continuum surrogate from MD simulated material fracture data sets. Firstly, we develop a novel coarse-graining method, to automatically handle the material fracture and its corresponding discontinuities in the MD displacement data sets. Inspired by the weighted essentially non-oscillatory (WENO) scheme, the key idea lies at an adaptive procedure to automatically choose the locally smoothest stencil, then reconstruct the coarse-grained material displacement field as the piecewise smooth solutions containing discontinuities. Then, based on the coarse-grained MD data, a two-phase optimization-based learning approach is proposed to infer the optimal peridynamics model with damage criterion. In the first phase, we identify the optimal nonlocal kernel function from the data sets without material damage to capture the material stiffness properties. Then, in the second phase, the material damage criterion is learnt as a smoothed step function from the data with fractures. As a result, a peridynamics surrogate is obtained. As a continuum model, our peridynamics surrogate model can be employed in further prediction tasks with different grid resolutions from training, and hence allows for substantial reductions in computational cost compared with MD. We illustrate the efficacy of the proposed approach with several numerical tests for the dynamic crack propagation problem in a single-layer graphene. Our tests show that the proposed data-driven model is robust and generalizable, in the sense that it is capable of modeling the initialization and growth of fractures under discretization and loading settings that are different from the ones used during training.</description><edition>English ed.</edition><identifier>ISSN: 0253-4827</identifier><identifier>EISSN: 1573-2754</identifier><identifier>DOI: 10.1007/s10483-023-2996-8</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Applications of Mathematics ; Classical Mechanics ; Continuum modeling ; Crack propagation ; Criteria ; Damage ; Datasets ; Discontinuity ; Fluid- and Aerodynamics ; Fractures ; Granulation ; Graphene ; homogenization ; Kernel functions ; Laboratory tests ; Learning ; machine learning ; material fracture ; Materials failure ; Mathematical Modeling and Industrial Mathematics ; Mathematics ; MATHEMATICS AND COMPUTING ; Mathematics and Statistics ; Mesoscale phenomena ; Molecular dynamics ; nonlocal models ; Optimization ; Partial Differential Equations ; peridynamics ; Robustness (mathematics) ; Step functions ; Stiffness ; Training</subject><ispartof>Applied mathematics and mechanics, 2023-07, Vol.44 (7), p.1125-1150</ispartof><rights>The Author(s) 2023</rights><rights>The Author(s) 2023. 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Q.</creatorcontrib><creatorcontrib>Xu, X.</creatorcontrib><creatorcontrib>Yu, Y.</creatorcontrib><creatorcontrib>Silling, S.</creatorcontrib><creatorcontrib>D’Elia, M.</creatorcontrib><creatorcontrib>Foster, J.</creatorcontrib><creatorcontrib>Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)</creatorcontrib><title>Towards a unified nonlocal, peridynamics framework for the coarse-graining of molecular dynamics data with fractures</title><title>Applied mathematics and mechanics</title><addtitle>Appl. Math. Mech.-Engl. Ed</addtitle><description>Molecular dynamics (MD) has served as a powerful tool for designing materials with reduced reliance on laboratory testing. However, the use of MD directly to treat the deformation and failure of materials at the mesoscale is still largely beyond reach. In this work, we propose a learning framework to extract a peridynamics model as a mesoscale continuum surrogate from MD simulated material fracture data sets. Firstly, we develop a novel coarse-graining method, to automatically handle the material fracture and its corresponding discontinuities in the MD displacement data sets. Inspired by the weighted essentially non-oscillatory (WENO) scheme, the key idea lies at an adaptive procedure to automatically choose the locally smoothest stencil, then reconstruct the coarse-grained material displacement field as the piecewise smooth solutions containing discontinuities. Then, based on the coarse-grained MD data, a two-phase optimization-based learning approach is proposed to infer the optimal peridynamics model with damage criterion. In the first phase, we identify the optimal nonlocal kernel function from the data sets without material damage to capture the material stiffness properties. Then, in the second phase, the material damage criterion is learnt as a smoothed step function from the data with fractures. As a result, a peridynamics surrogate is obtained. As a continuum model, our peridynamics surrogate model can be employed in further prediction tasks with different grid resolutions from training, and hence allows for substantial reductions in computational cost compared with MD. We illustrate the efficacy of the proposed approach with several numerical tests for the dynamic crack propagation problem in a single-layer graphene. 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Q.</creatorcontrib><creatorcontrib>Xu, X.</creatorcontrib><creatorcontrib>Yu, Y.</creatorcontrib><creatorcontrib>Silling, S.</creatorcontrib><creatorcontrib>D’Elia, M.</creatorcontrib><creatorcontrib>Foster, J.</creatorcontrib><creatorcontrib>Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)</creatorcontrib><collection>SpringerOpen</collection><collection>CrossRef</collection><collection>Wanfang Data Journals - Hong Kong</collection><collection>WANFANG Data Centre</collection><collection>Wanfang Data Journals</collection><collection>万方数据期刊 - 香港版</collection><collection>China Online Journals (COJ)</collection><collection>China Online Journals (COJ)</collection><collection>OSTI.GOV - Hybrid</collection><collection>OSTI.GOV</collection><jtitle>Applied mathematics and mechanics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>You, H. Q.</au><au>Xu, X.</au><au>Yu, Y.</au><au>Silling, S.</au><au>D’Elia, M.</au><au>Foster, J.</au><aucorp>Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Towards a unified nonlocal, peridynamics framework for the coarse-graining of molecular dynamics data with fractures</atitle><jtitle>Applied mathematics and mechanics</jtitle><stitle>Appl. Math. Mech.-Engl. Ed</stitle><date>2023-07-01</date><risdate>2023</risdate><volume>44</volume><issue>7</issue><spage>1125</spage><epage>1150</epage><pages>1125-1150</pages><issn>0253-4827</issn><eissn>1573-2754</eissn><abstract>Molecular dynamics (MD) has served as a powerful tool for designing materials with reduced reliance on laboratory testing. However, the use of MD directly to treat the deformation and failure of materials at the mesoscale is still largely beyond reach. In this work, we propose a learning framework to extract a peridynamics model as a mesoscale continuum surrogate from MD simulated material fracture data sets. Firstly, we develop a novel coarse-graining method, to automatically handle the material fracture and its corresponding discontinuities in the MD displacement data sets. Inspired by the weighted essentially non-oscillatory (WENO) scheme, the key idea lies at an adaptive procedure to automatically choose the locally smoothest stencil, then reconstruct the coarse-grained material displacement field as the piecewise smooth solutions containing discontinuities. Then, based on the coarse-grained MD data, a two-phase optimization-based learning approach is proposed to infer the optimal peridynamics model with damage criterion. In the first phase, we identify the optimal nonlocal kernel function from the data sets without material damage to capture the material stiffness properties. Then, in the second phase, the material damage criterion is learnt as a smoothed step function from the data with fractures. As a result, a peridynamics surrogate is obtained. As a continuum model, our peridynamics surrogate model can be employed in further prediction tasks with different grid resolutions from training, and hence allows for substantial reductions in computational cost compared with MD. We illustrate the efficacy of the proposed approach with several numerical tests for the dynamic crack propagation problem in a single-layer graphene. Our tests show that the proposed data-driven model is robust and generalizable, in the sense that it is capable of modeling the initialization and growth of fractures under discretization and loading settings that are different from the ones used during training.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1007/s10483-023-2996-8</doi><tpages>26</tpages><edition>English ed.</edition><oa>free_for_read</oa></addata></record> |
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subjects | Applications of Mathematics Classical Mechanics Continuum modeling Crack propagation Criteria Damage Datasets Discontinuity Fluid- and Aerodynamics Fractures Granulation Graphene homogenization Kernel functions Laboratory tests Learning machine learning material fracture Materials failure Mathematical Modeling and Industrial Mathematics Mathematics MATHEMATICS AND COMPUTING Mathematics and Statistics Mesoscale phenomena Molecular dynamics nonlocal models Optimization Partial Differential Equations peridynamics Robustness (mathematics) Step functions Stiffness Training |
title | Towards a unified nonlocal, peridynamics framework for the coarse-graining of molecular dynamics data with fractures |
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