Crystallization and preliminary X-ray diffraction study of recombinant adenine phosphoribosyltransferase from the thermophilic bacterium Thermus thermophilus strain HB27
Adenine phosphoribosyltransferase (APRT) belongs to the type I phosphoribosyltransferase family and catalyzes the formation of adenosine monophosphate via transfer of the 5-phosphoribosyl group from phosphoribosyl pyrophosphate to the nitrogen atom N9 of the adenine base. Proteins of this family are...
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description | Adenine phosphoribosyltransferase (APRT) belongs to the type I phosphoribosyltransferase family and catalyzes the formation of adenosine monophosphate via transfer of the 5-phosphoribosyl group from phosphoribosyl pyrophosphate to the nitrogen atom N9 of the adenine base. Proteins of this family are involved in a salvage pathway of nucleotide synthesis, thus providing purine base utilization and maintaining the optimal level of purine bases in the body. Adenine phosphoribosyltransferase from the extremely thermophilic
Thermus thermophilus
strain HB27 was produced using a highly efficient
E. coli
producer strain and was then purified by affinity and gel-filtration chromatography. This enzyme was successfully employed as a catalyst for the cascade biosynthesis of biologically important nucleotides. The screening of crystallization conditions for recombinant APRT from
T. thermophilus
HB27 was performed in order to determine the enzyme structure by X-ray diffraction. The crystallization conditions, which were found by the vapor-diffusion technique, were then optimized to apply the counter-diffusion technique. The crystals of the enzyme were grown by the capillary counter-diffusion method. The crystals belong to sp. gr. P12
1
1 and have the following unitcell parameters:
a
= 69.86 Å, b = 82.16 Å, c = 91.39 Å, α = γ = 90°, β = 102.58°. The X-ray diffraction data set suitable for the determination of the APRT structure at 2.6 Å resolution was collected from the crystals at the SPring-8 synchrotron facility (Japan). |
doi_str_mv | 10.1134/S106377451704023X |
format | Article |
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Thermus thermophilus
strain HB27 was produced using a highly efficient
E. coli
producer strain and was then purified by affinity and gel-filtration chromatography. This enzyme was successfully employed as a catalyst for the cascade biosynthesis of biologically important nucleotides. The screening of crystallization conditions for recombinant APRT from
T. thermophilus
HB27 was performed in order to determine the enzyme structure by X-ray diffraction. The crystallization conditions, which were found by the vapor-diffusion technique, were then optimized to apply the counter-diffusion technique. The crystals of the enzyme were grown by the capillary counter-diffusion method. The crystals belong to sp. gr. P12
1
1 and have the following unitcell parameters:
a
= 69.86 Å, b = 82.16 Å, c = 91.39 Å, α = γ = 90°, β = 102.58°. The X-ray diffraction data set suitable for the determination of the APRT structure at 2.6 Å resolution was collected from the crystals at the SPring-8 synchrotron facility (Japan).</description><identifier>ISSN: 1063-7745</identifier><identifier>EISSN: 1562-689X</identifier><identifier>DOI: 10.1134/S106377451704023X</identifier><language>eng</language><publisher>Moscow: Pleiades Publishing</publisher><subject>ADENINES ; ADENOSINE ; Adenosine monophosphate ; BACTERIA ; BIOSYNTHESIS ; CAPILLARIES ; Catalysts ; CHROMATOGRAPHY ; CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY ; Crystal growth ; CRYSTALLIZATION ; Crystallography and Scattering Methods ; CRYSTALS ; Diffraction ; DIFFUSION ; E coli ; ENZYMES ; INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY ; NITROGEN ; Nucleotides ; Physics ; Physics and Astronomy ; Proteins ; PYROPHOSPHATES ; Salvage ; SPRING-8 STORAGE RING ; STRAINS ; Structure of Macromolecular Compounds ; X-RAY DIFFRACTION ; Yeast</subject><ispartof>Crystallography reports, 2017-07, Vol.62 (4), p.580-583</ispartof><rights>Pleiades Publishing, Inc. 2017</rights><rights>Copyright Springer Science & Business Media 2017</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c381t-1c85df7d47432b345891b33348e7b136decf3b6e1d2078ed87d46adc5836d9633</citedby><cites>FETCH-LOGICAL-c381t-1c85df7d47432b345891b33348e7b136decf3b6e1d2078ed87d46adc5836d9633</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1134/S106377451704023X$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1134/S106377451704023X$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,780,784,885,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.osti.gov/biblio/22758360$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Sinitsyna, E. V.</creatorcontrib><creatorcontrib>Timofeev, V. I.</creatorcontrib><creatorcontrib>Tuzova, E. S.</creatorcontrib><creatorcontrib>Kostromina, M. A.</creatorcontrib><creatorcontrib>Murav’eva, T. I.</creatorcontrib><creatorcontrib>Esipov, R. S.</creatorcontrib><creatorcontrib>Kuranova, I. P.</creatorcontrib><title>Crystallization and preliminary X-ray diffraction study of recombinant adenine phosphoribosyltransferase from the thermophilic bacterium Thermus thermophilus strain HB27</title><title>Crystallography reports</title><addtitle>Crystallogr. Rep</addtitle><description>Adenine phosphoribosyltransferase (APRT) belongs to the type I phosphoribosyltransferase family and catalyzes the formation of adenosine monophosphate via transfer of the 5-phosphoribosyl group from phosphoribosyl pyrophosphate to the nitrogen atom N9 of the adenine base. Proteins of this family are involved in a salvage pathway of nucleotide synthesis, thus providing purine base utilization and maintaining the optimal level of purine bases in the body. Adenine phosphoribosyltransferase from the extremely thermophilic
Thermus thermophilus
strain HB27 was produced using a highly efficient
E. coli
producer strain and was then purified by affinity and gel-filtration chromatography. This enzyme was successfully employed as a catalyst for the cascade biosynthesis of biologically important nucleotides. The screening of crystallization conditions for recombinant APRT from
T. thermophilus
HB27 was performed in order to determine the enzyme structure by X-ray diffraction. The crystallization conditions, which were found by the vapor-diffusion technique, were then optimized to apply the counter-diffusion technique. The crystals of the enzyme were grown by the capillary counter-diffusion method. The crystals belong to sp. gr. P12
1
1 and have the following unitcell parameters:
a
= 69.86 Å, b = 82.16 Å, c = 91.39 Å, α = γ = 90°, β = 102.58°. The X-ray diffraction data set suitable for the determination of the APRT structure at 2.6 Å resolution was collected from the crystals at the SPring-8 synchrotron facility (Japan).</description><subject>ADENINES</subject><subject>ADENOSINE</subject><subject>Adenosine monophosphate</subject><subject>BACTERIA</subject><subject>BIOSYNTHESIS</subject><subject>CAPILLARIES</subject><subject>Catalysts</subject><subject>CHROMATOGRAPHY</subject><subject>CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY</subject><subject>Crystal growth</subject><subject>CRYSTALLIZATION</subject><subject>Crystallography and Scattering Methods</subject><subject>CRYSTALS</subject><subject>Diffraction</subject><subject>DIFFUSION</subject><subject>E coli</subject><subject>ENZYMES</subject><subject>INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY</subject><subject>NITROGEN</subject><subject>Nucleotides</subject><subject>Physics</subject><subject>Physics and Astronomy</subject><subject>Proteins</subject><subject>PYROPHOSPHATES</subject><subject>Salvage</subject><subject>SPRING-8 STORAGE RING</subject><subject>STRAINS</subject><subject>Structure of Macromolecular Compounds</subject><subject>X-RAY DIFFRACTION</subject><subject>Yeast</subject><issn>1063-7745</issn><issn>1562-689X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNp1kc1u1DAUhSNUJNrCA7CzxDqtf5LYs4QRdJAqsaBIs4sc-5pxldjh2lmEN-ItcRgkKlUsruzr851jy7eq3jJ6w5hobr8y2gkpm5ZJ2lAuji-qS9Z2vO7U7nhR9kWuN_1VdZXSI6VUKdZcVr_2uKasx9H_1NnHQHSwZEYY_eSDxpUca9Qrsd451OYPkfJiVxIdQTBxGgoWMtEWgg9A5lNMpdAPMa1jRh2SA9QJiMM4kXyCrXCK88mP3pChhAL6ZSIP2_GSnsilSSXBB3L4wOXr6qXTY4I3f9fr6tunjw_7Q33_5e7z_v19bYRiuWZGtdZJ28hG8EE0rdqxQQjRKJADE50F48TQAbOcSgVWFbTT1rSqaLtOiOvq3Tk3puz7ZHwGczIxBDC551xuIP1HzRh_LJBy_xgXDOVhPdvxlpcbWVcodqYMxpQQXD-jn8q39oz229z6Z3MrHn72pMKG74BPkv9r-g28756V</recordid><startdate>20170701</startdate><enddate>20170701</enddate><creator>Sinitsyna, E. V.</creator><creator>Timofeev, V. I.</creator><creator>Tuzova, E. S.</creator><creator>Kostromina, M. A.</creator><creator>Murav’eva, T. I.</creator><creator>Esipov, R. S.</creator><creator>Kuranova, I. P.</creator><general>Pleiades Publishing</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>OTOTI</scope></search><sort><creationdate>20170701</creationdate><title>Crystallization and preliminary X-ray diffraction study of recombinant adenine phosphoribosyltransferase from the thermophilic bacterium Thermus thermophilus strain HB27</title><author>Sinitsyna, E. V. ; Timofeev, V. I. ; Tuzova, E. S. ; Kostromina, M. A. ; Murav’eva, T. I. ; Esipov, R. S. ; Kuranova, I. P.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c381t-1c85df7d47432b345891b33348e7b136decf3b6e1d2078ed87d46adc5836d9633</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>ADENINES</topic><topic>ADENOSINE</topic><topic>Adenosine monophosphate</topic><topic>BACTERIA</topic><topic>BIOSYNTHESIS</topic><topic>CAPILLARIES</topic><topic>Catalysts</topic><topic>CHROMATOGRAPHY</topic><topic>CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY</topic><topic>Crystal growth</topic><topic>CRYSTALLIZATION</topic><topic>Crystallography and Scattering Methods</topic><topic>CRYSTALS</topic><topic>Diffraction</topic><topic>DIFFUSION</topic><topic>E coli</topic><topic>ENZYMES</topic><topic>INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY</topic><topic>NITROGEN</topic><topic>Nucleotides</topic><topic>Physics</topic><topic>Physics and Astronomy</topic><topic>Proteins</topic><topic>PYROPHOSPHATES</topic><topic>Salvage</topic><topic>SPRING-8 STORAGE RING</topic><topic>STRAINS</topic><topic>Structure of Macromolecular Compounds</topic><topic>X-RAY DIFFRACTION</topic><topic>Yeast</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sinitsyna, E. V.</creatorcontrib><creatorcontrib>Timofeev, V. I.</creatorcontrib><creatorcontrib>Tuzova, E. S.</creatorcontrib><creatorcontrib>Kostromina, M. A.</creatorcontrib><creatorcontrib>Murav’eva, T. I.</creatorcontrib><creatorcontrib>Esipov, R. S.</creatorcontrib><creatorcontrib>Kuranova, I. P.</creatorcontrib><collection>CrossRef</collection><collection>OSTI.GOV</collection><jtitle>Crystallography reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sinitsyna, E. V.</au><au>Timofeev, V. I.</au><au>Tuzova, E. S.</au><au>Kostromina, M. A.</au><au>Murav’eva, T. I.</au><au>Esipov, R. S.</au><au>Kuranova, I. P.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Crystallization and preliminary X-ray diffraction study of recombinant adenine phosphoribosyltransferase from the thermophilic bacterium Thermus thermophilus strain HB27</atitle><jtitle>Crystallography reports</jtitle><stitle>Crystallogr. Rep</stitle><date>2017-07-01</date><risdate>2017</risdate><volume>62</volume><issue>4</issue><spage>580</spage><epage>583</epage><pages>580-583</pages><issn>1063-7745</issn><eissn>1562-689X</eissn><abstract>Adenine phosphoribosyltransferase (APRT) belongs to the type I phosphoribosyltransferase family and catalyzes the formation of adenosine monophosphate via transfer of the 5-phosphoribosyl group from phosphoribosyl pyrophosphate to the nitrogen atom N9 of the adenine base. Proteins of this family are involved in a salvage pathway of nucleotide synthesis, thus providing purine base utilization and maintaining the optimal level of purine bases in the body. Adenine phosphoribosyltransferase from the extremely thermophilic
Thermus thermophilus
strain HB27 was produced using a highly efficient
E. coli
producer strain and was then purified by affinity and gel-filtration chromatography. This enzyme was successfully employed as a catalyst for the cascade biosynthesis of biologically important nucleotides. The screening of crystallization conditions for recombinant APRT from
T. thermophilus
HB27 was performed in order to determine the enzyme structure by X-ray diffraction. The crystallization conditions, which were found by the vapor-diffusion technique, were then optimized to apply the counter-diffusion technique. The crystals of the enzyme were grown by the capillary counter-diffusion method. The crystals belong to sp. gr. P12
1
1 and have the following unitcell parameters:
a
= 69.86 Å, b = 82.16 Å, c = 91.39 Å, α = γ = 90°, β = 102.58°. The X-ray diffraction data set suitable for the determination of the APRT structure at 2.6 Å resolution was collected from the crystals at the SPring-8 synchrotron facility (Japan).</abstract><cop>Moscow</cop><pub>Pleiades Publishing</pub><doi>10.1134/S106377451704023X</doi><tpages>4</tpages></addata></record> |
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subjects | ADENINES ADENOSINE Adenosine monophosphate BACTERIA BIOSYNTHESIS CAPILLARIES Catalysts CHROMATOGRAPHY CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY Crystal growth CRYSTALLIZATION Crystallography and Scattering Methods CRYSTALS Diffraction DIFFUSION E coli ENZYMES INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY NITROGEN Nucleotides Physics Physics and Astronomy Proteins PYROPHOSPHATES Salvage SPRING-8 STORAGE RING STRAINS Structure of Macromolecular Compounds X-RAY DIFFRACTION Yeast |
title | Crystallization and preliminary X-ray diffraction study of recombinant adenine phosphoribosyltransferase from the thermophilic bacterium Thermus thermophilus strain HB27 |
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