BUZZ: an essential gene for postinitiation root hair growth and a mediator of root architecture in Brachypodium distachyon

Summary Here, we discover a player in root development. Recovered from a forward‐genetic screen in Brachypodium distachyon, the buzz mutant initiates root hairs but they fail to elongate. In addition, buzz roots grow twice as fast as wild‐type roots. Also, lateral roots show increased sensitivity to...

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Veröffentlicht in:The New phytologist 2023-09, Vol.239 (5), p.1723-1739
Hauptverfasser: Lehman, Thiel A., Rosas, Miguel A., Brew‐Appiah, Rhoda A. T., Solanki, Shyam, York, Zara B., Dannay, Rachel, Wu, Ying, Roalson, Eric H., Zheng, Ping, Main, Dorrie, Baskin, Tobias I., Sanguinet, Karen A.
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container_end_page 1739
container_issue 5
container_start_page 1723
container_title The New phytologist
container_volume 239
creator Lehman, Thiel A.
Rosas, Miguel A.
Brew‐Appiah, Rhoda A. T.
Solanki, Shyam
York, Zara B.
Dannay, Rachel
Wu, Ying
Roalson, Eric H.
Zheng, Ping
Main, Dorrie
Baskin, Tobias I.
Sanguinet, Karen A.
description Summary Here, we discover a player in root development. Recovered from a forward‐genetic screen in Brachypodium distachyon, the buzz mutant initiates root hairs but they fail to elongate. In addition, buzz roots grow twice as fast as wild‐type roots. Also, lateral roots show increased sensitivity to nitrate, whereas primary roots are less sensitive to nitrate. Using whole‐genome resequencing, we identified the causal single nucleotide polymorphism as occurring in a conserved but previously uncharacterized cyclin‐dependent kinase (CDK)‐like gene. The buzz mutant phenotypes are rescued by the wild‐type B. distachyon BUZZ coding sequence and by an apparent homolog in Arabidopsis thaliana. Moreover, T‐DNA mutants in A. thaliana BUZZ have shorter root hairs. BUZZ mRNA localizes to epidermal cells and develops root hairs and, in the latter, partially colocalizes with the NRT1.1A nitrate transporter. Based on qPCR and RNA‐Seq, buzz overexpresses ROOT HAIRLESS LIKE SIX‐1 and ‐2 and misregulates genes related to hormone signaling, RNA processing, cytoskeletal, and cell wall organization, and to the assimilation of nitrate. Overall, these data demonstrate that BUZZ is required for tip growth after root hair initiation and root architectural responses to nitrate.
doi_str_mv 10.1111/nph.19079
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T. ; Solanki, Shyam ; York, Zara B. ; Dannay, Rachel ; Wu, Ying ; Roalson, Eric H. ; Zheng, Ping ; Main, Dorrie ; Baskin, Tobias I. ; Sanguinet, Karen A.</creator><creatorcontrib>Lehman, Thiel A. ; Rosas, Miguel A. ; Brew‐Appiah, Rhoda A. T. ; Solanki, Shyam ; York, Zara B. ; Dannay, Rachel ; Wu, Ying ; Roalson, Eric H. ; Zheng, Ping ; Main, Dorrie ; Baskin, Tobias I. ; Sanguinet, Karen A. ; Univ. of Massachusetts, Amherst, MA (United States)</creatorcontrib><description>Summary Here, we discover a player in root development. Recovered from a forward‐genetic screen in Brachypodium distachyon, the buzz mutant initiates root hairs but they fail to elongate. In addition, buzz roots grow twice as fast as wild‐type roots. Also, lateral roots show increased sensitivity to nitrate, whereas primary roots are less sensitive to nitrate. Using whole‐genome resequencing, we identified the causal single nucleotide polymorphism as occurring in a conserved but previously uncharacterized cyclin‐dependent kinase (CDK)‐like gene. The buzz mutant phenotypes are rescued by the wild‐type B. distachyon BUZZ coding sequence and by an apparent homolog in Arabidopsis thaliana. Moreover, T‐DNA mutants in A. thaliana BUZZ have shorter root hairs. BUZZ mRNA localizes to epidermal cells and develops root hairs and, in the latter, partially colocalizes with the NRT1.1A nitrate transporter. Based on qPCR and RNA‐Seq, buzz overexpresses ROOT HAIRLESS LIKE SIX‐1 and ‐2 and misregulates genes related to hormone signaling, RNA processing, cytoskeletal, and cell wall organization, and to the assimilation of nitrate. 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Also, lateral roots show increased sensitivity to nitrate, whereas primary roots are less sensitive to nitrate. Using whole‐genome resequencing, we identified the causal single nucleotide polymorphism as occurring in a conserved but previously uncharacterized cyclin‐dependent kinase (CDK)‐like gene. The buzz mutant phenotypes are rescued by the wild‐type B. distachyon BUZZ coding sequence and by an apparent homolog in Arabidopsis thaliana. Moreover, T‐DNA mutants in A. thaliana BUZZ have shorter root hairs. BUZZ mRNA localizes to epidermal cells and develops root hairs and, in the latter, partially colocalizes with the NRT1.1A nitrate transporter. Based on qPCR and RNA‐Seq, buzz overexpresses ROOT HAIRLESS LIKE SIX‐1 and ‐2 and misregulates genes related to hormone signaling, RNA processing, cytoskeletal, and cell wall organization, and to the assimilation of nitrate. 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subjects Arabidopsis
Arabidopsis Proteins - metabolism
BASIC BIOLOGICAL SCIENCES
Brachypodium
Brachypodium distachyon
BUZZ
Cell walls
Cytoskeleton
Deoxyribonucleic acid
DNA
Gene Expression Regulation, Plant
Genes
Genes, Essential
Genetic screening
Genomes
Hairless
Hormones
kinase
Kinases
mRNA
Mutants
nitrate
Nitrates
Nitrates - metabolism
Nucleotide sequence
Nucleotides
Phenotypes
Plant Roots - metabolism
Polymorphism
Ribonucleic acid
RNA
RNA processing
root architecture
Root development
root hair
Root hairs
Roots
RSLs
Signal processing
Single-nucleotide polymorphism
title BUZZ: an essential gene for postinitiation root hair growth and a mediator of root architecture in Brachypodium distachyon
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