A procedure to introduce point mutations into the Rubisco large subunit gene in wild‐type plants
SUMMARY Photosynthetic inefficiencies limit the productivity and sustainability of crop production and the resilience of agriculture to future societal and environmental challenges. Rubisco is a key target for improvement as it plays a central role in carbon fixation during photosynthesis and is rem...
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Veröffentlicht in: | The Plant journal : for cell and molecular biology 2021-05, Vol.106 (3), p.876-887 |
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creator | Lin, Myat T. Orr, Douglas J. Worrall, Dawn Parry, Martin A. J. Carmo‐Silva, Elizabete Hanson, Maureen R. |
description | SUMMARY
Photosynthetic inefficiencies limit the productivity and sustainability of crop production and the resilience of agriculture to future societal and environmental challenges. Rubisco is a key target for improvement as it plays a central role in carbon fixation during photosynthesis and is remarkably inefficient. Introduction of mutations to the chloroplast‐encoded Rubisco large subunit rbcL is of particular interest for improving the catalytic activity and efficiency of the enzyme. However, manipulation of rbcL is hampered by its location in the plastome, with many species recalcitrant to plastome transformation, and by the plastid's efficient repair system, which can prevent effective maintenance of mutations introduced with homologous recombination. Here we present a system where the introduction of a number of silent mutations into rbcL within the model plant Nicotiana tabacum facilitates simplified screening via additional restriction enzyme sites. This system was used to successfully generate a range of transplastomic lines from wild‐type N. tabacum with stable point mutations within rbcL in 40% of the transformants, allowing assessment of the effect of these mutations on Rubisco assembly and activity. With further optimization the approach offers a viable way forward for mutagenic testing of Rubisco function in planta within tobacco and modification of rbcL in other crops where chloroplast transformation is feasible. The transformation strategy could also be applied to introduce point mutations in other chloroplast‐encoded genes.
Significance Statement
A simplified transformation strategy was developed to perform site‐directed mutagenesis in the chloroplast‐encoded Rubisco large subunit of tobacco. This approach reduces unwanted mismatch repair events, enables rapid screening of transformed lines that possess desired mutations and can be applied to modify any chloroplast‐encoded gene in plant species amenable to plastid genome transformation. |
doi_str_mv | 10.1111/tpj.15196 |
format | Article |
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Photosynthetic inefficiencies limit the productivity and sustainability of crop production and the resilience of agriculture to future societal and environmental challenges. Rubisco is a key target for improvement as it plays a central role in carbon fixation during photosynthesis and is remarkably inefficient. Introduction of mutations to the chloroplast‐encoded Rubisco large subunit rbcL is of particular interest for improving the catalytic activity and efficiency of the enzyme. However, manipulation of rbcL is hampered by its location in the plastome, with many species recalcitrant to plastome transformation, and by the plastid's efficient repair system, which can prevent effective maintenance of mutations introduced with homologous recombination. Here we present a system where the introduction of a number of silent mutations into rbcL within the model plant Nicotiana tabacum facilitates simplified screening via additional restriction enzyme sites. This system was used to successfully generate a range of transplastomic lines from wild‐type N. tabacum with stable point mutations within rbcL in 40% of the transformants, allowing assessment of the effect of these mutations on Rubisco assembly and activity. With further optimization the approach offers a viable way forward for mutagenic testing of Rubisco function in planta within tobacco and modification of rbcL in other crops where chloroplast transformation is feasible. The transformation strategy could also be applied to introduce point mutations in other chloroplast‐encoded genes.
Significance Statement
A simplified transformation strategy was developed to perform site‐directed mutagenesis in the chloroplast‐encoded Rubisco large subunit of tobacco. This approach reduces unwanted mismatch repair events, enables rapid screening of transformed lines that possess desired mutations and can be applied to modify any chloroplast‐encoded gene in plant species amenable to plastid genome transformation.</description><identifier>ISSN: 0960-7412</identifier><identifier>EISSN: 1365-313X</identifier><identifier>DOI: 10.1111/tpj.15196</identifier><identifier>PMID: 33576096</identifier><language>eng</language><publisher>England: Blackwell Publishing Ltd</publisher><subject>Carbon fixation ; Catalytic activity ; chloroplast transformation ; Chloroplasts ; Chloroplasts - genetics ; Crop production ; Enzymes ; food security ; Gene Editing - methods ; Genes, Plant - genetics ; Genetic transformation ; Homologous recombination ; Homology ; Kinases ; Mutation ; Nicotiana - enzymology ; Nicotiana - genetics ; Nicotiana tabacum ; Optimization ; Photosynthesis ; Point Mutation - genetics ; Ribulose-bisphosphate carboxylase ; Ribulose-Bisphosphate Carboxylase - genetics ; Ribulose-Bisphosphate Carboxylase - metabolism ; Rubisco ; site‐directed mutagenesis ; technical advance ; Tobacco ; Transformations</subject><ispartof>The Plant journal : for cell and molecular biology, 2021-05, Vol.106 (3), p.876-887</ispartof><rights>2021 The Authors. published by Society for Experimental Biology and John Wiley & Sons Ltd.</rights><rights>2021 The Authors. The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd.</rights><rights>2021. This article is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4156-241c3f1ca773763f4f6b497b51dfd55e5ab1645289cbf19513af9d507f4f6dcd3</citedby><cites>FETCH-LOGICAL-c4156-241c3f1ca773763f4f6b497b51dfd55e5ab1645289cbf19513af9d507f4f6dcd3</cites><orcidid>0000-0003-1217-537X ; 0000-0001-6059-9359 ; 0000000160599359 ; 000000031217537X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Ftpj.15196$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Ftpj.15196$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,881,1411,1427,27901,27902,45550,45551,46384,46808</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33576096$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/biblio/1770480$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Lin, Myat T.</creatorcontrib><creatorcontrib>Orr, Douglas J.</creatorcontrib><creatorcontrib>Worrall, Dawn</creatorcontrib><creatorcontrib>Parry, Martin A. J.</creatorcontrib><creatorcontrib>Carmo‐Silva, Elizabete</creatorcontrib><creatorcontrib>Hanson, Maureen R.</creatorcontrib><title>A procedure to introduce point mutations into the Rubisco large subunit gene in wild‐type plants</title><title>The Plant journal : for cell and molecular biology</title><addtitle>Plant J</addtitle><description>SUMMARY
Photosynthetic inefficiencies limit the productivity and sustainability of crop production and the resilience of agriculture to future societal and environmental challenges. Rubisco is a key target for improvement as it plays a central role in carbon fixation during photosynthesis and is remarkably inefficient. Introduction of mutations to the chloroplast‐encoded Rubisco large subunit rbcL is of particular interest for improving the catalytic activity and efficiency of the enzyme. However, manipulation of rbcL is hampered by its location in the plastome, with many species recalcitrant to plastome transformation, and by the plastid's efficient repair system, which can prevent effective maintenance of mutations introduced with homologous recombination. Here we present a system where the introduction of a number of silent mutations into rbcL within the model plant Nicotiana tabacum facilitates simplified screening via additional restriction enzyme sites. This system was used to successfully generate a range of transplastomic lines from wild‐type N. tabacum with stable point mutations within rbcL in 40% of the transformants, allowing assessment of the effect of these mutations on Rubisco assembly and activity. With further optimization the approach offers a viable way forward for mutagenic testing of Rubisco function in planta within tobacco and modification of rbcL in other crops where chloroplast transformation is feasible. The transformation strategy could also be applied to introduce point mutations in other chloroplast‐encoded genes.
Significance Statement
A simplified transformation strategy was developed to perform site‐directed mutagenesis in the chloroplast‐encoded Rubisco large subunit of tobacco. This approach reduces unwanted mismatch repair events, enables rapid screening of transformed lines that possess desired mutations and can be applied to modify any chloroplast‐encoded gene in plant species amenable to plastid genome transformation.</description><subject>Carbon fixation</subject><subject>Catalytic activity</subject><subject>chloroplast transformation</subject><subject>Chloroplasts</subject><subject>Chloroplasts - genetics</subject><subject>Crop production</subject><subject>Enzymes</subject><subject>food security</subject><subject>Gene Editing - methods</subject><subject>Genes, Plant - genetics</subject><subject>Genetic transformation</subject><subject>Homologous recombination</subject><subject>Homology</subject><subject>Kinases</subject><subject>Mutation</subject><subject>Nicotiana - enzymology</subject><subject>Nicotiana - genetics</subject><subject>Nicotiana tabacum</subject><subject>Optimization</subject><subject>Photosynthesis</subject><subject>Point Mutation - genetics</subject><subject>Ribulose-bisphosphate carboxylase</subject><subject>Ribulose-Bisphosphate Carboxylase - genetics</subject><subject>Ribulose-Bisphosphate Carboxylase - metabolism</subject><subject>Rubisco</subject><subject>site‐directed mutagenesis</subject><subject>technical advance</subject><subject>Tobacco</subject><subject>Transformations</subject><issn>0960-7412</issn><issn>1365-313X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>EIF</sourceid><recordid>eNp1kMtqGzEUQEVJqJ20i_5AEe0qi0l0Ry_P0pg0TQgkBBe6EzOSJh5jj6Z6ELzLJ-Qb8yWVO0530UaCezjoHoS-ADmHfC7isD4HDpX4gKZABS8o0N9HaEoqQQrJoJygkxDWhICkgn1EE0q5FHk6Rc0cD95pa5K3ODrc9dE7k7TFg8tvvE2xjp3rw37icFxZ_JCaLmiHN7V_tDikJvVdxI-2t5nBT93GvD6_xN2QFZu6j-ETOm7rTbCfD_cp-vXjcrn4WdzeXV0v5reFZsBFUTLQtAVdS0mloC1rRcMq2XAwreHc8roBwXg5q3TTQsWB1m1lOJF70mhDT9G30etC7FTQXbR6pV3fWx0VSEnYjGTo-wjlrf8kG6Jau-T7_C9VZjcrKaUyU2cjpb0LwdtWDb7b1n6ngKh9cpWTq3_JM_v1YEzN1pr_5FvjDFyMQE5jd--b1PL-ZlT-BZJIjB4</recordid><startdate>202105</startdate><enddate>202105</enddate><creator>Lin, Myat T.</creator><creator>Orr, Douglas J.</creator><creator>Worrall, Dawn</creator><creator>Parry, Martin A. J.</creator><creator>Carmo‐Silva, Elizabete</creator><creator>Hanson, Maureen R.</creator><general>Blackwell Publishing Ltd</general><general>Wiley-Blackwell</general><scope>24P</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7QP</scope><scope>7QR</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>OTOTI</scope><orcidid>https://orcid.org/0000-0003-1217-537X</orcidid><orcidid>https://orcid.org/0000-0001-6059-9359</orcidid><orcidid>https://orcid.org/0000000160599359</orcidid><orcidid>https://orcid.org/000000031217537X</orcidid></search><sort><creationdate>202105</creationdate><title>A procedure to introduce point mutations into the Rubisco large subunit gene in wild‐type plants</title><author>Lin, Myat T. ; Orr, Douglas J. ; Worrall, Dawn ; Parry, Martin A. J. ; Carmo‐Silva, Elizabete ; Hanson, Maureen R.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4156-241c3f1ca773763f4f6b497b51dfd55e5ab1645289cbf19513af9d507f4f6dcd3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Carbon fixation</topic><topic>Catalytic activity</topic><topic>chloroplast transformation</topic><topic>Chloroplasts</topic><topic>Chloroplasts - genetics</topic><topic>Crop production</topic><topic>Enzymes</topic><topic>food security</topic><topic>Gene Editing - methods</topic><topic>Genes, Plant - genetics</topic><topic>Genetic transformation</topic><topic>Homologous recombination</topic><topic>Homology</topic><topic>Kinases</topic><topic>Mutation</topic><topic>Nicotiana - enzymology</topic><topic>Nicotiana - genetics</topic><topic>Nicotiana tabacum</topic><topic>Optimization</topic><topic>Photosynthesis</topic><topic>Point Mutation - genetics</topic><topic>Ribulose-bisphosphate carboxylase</topic><topic>Ribulose-Bisphosphate Carboxylase - genetics</topic><topic>Ribulose-Bisphosphate Carboxylase - metabolism</topic><topic>Rubisco</topic><topic>site‐directed mutagenesis</topic><topic>technical advance</topic><topic>Tobacco</topic><topic>Transformations</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lin, Myat T.</creatorcontrib><creatorcontrib>Orr, Douglas J.</creatorcontrib><creatorcontrib>Worrall, Dawn</creatorcontrib><creatorcontrib>Parry, Martin A. J.</creatorcontrib><creatorcontrib>Carmo‐Silva, Elizabete</creatorcontrib><creatorcontrib>Hanson, Maureen R.</creatorcontrib><collection>Wiley Online Library Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>OSTI.GOV</collection><jtitle>The Plant journal : for cell and molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lin, Myat T.</au><au>Orr, Douglas J.</au><au>Worrall, Dawn</au><au>Parry, Martin A. J.</au><au>Carmo‐Silva, Elizabete</au><au>Hanson, Maureen R.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A procedure to introduce point mutations into the Rubisco large subunit gene in wild‐type plants</atitle><jtitle>The Plant journal : for cell and molecular biology</jtitle><addtitle>Plant J</addtitle><date>2021-05</date><risdate>2021</risdate><volume>106</volume><issue>3</issue><spage>876</spage><epage>887</epage><pages>876-887</pages><issn>0960-7412</issn><eissn>1365-313X</eissn><abstract>SUMMARY
Photosynthetic inefficiencies limit the productivity and sustainability of crop production and the resilience of agriculture to future societal and environmental challenges. Rubisco is a key target for improvement as it plays a central role in carbon fixation during photosynthesis and is remarkably inefficient. Introduction of mutations to the chloroplast‐encoded Rubisco large subunit rbcL is of particular interest for improving the catalytic activity and efficiency of the enzyme. However, manipulation of rbcL is hampered by its location in the plastome, with many species recalcitrant to plastome transformation, and by the plastid's efficient repair system, which can prevent effective maintenance of mutations introduced with homologous recombination. Here we present a system where the introduction of a number of silent mutations into rbcL within the model plant Nicotiana tabacum facilitates simplified screening via additional restriction enzyme sites. This system was used to successfully generate a range of transplastomic lines from wild‐type N. tabacum with stable point mutations within rbcL in 40% of the transformants, allowing assessment of the effect of these mutations on Rubisco assembly and activity. With further optimization the approach offers a viable way forward for mutagenic testing of Rubisco function in planta within tobacco and modification of rbcL in other crops where chloroplast transformation is feasible. The transformation strategy could also be applied to introduce point mutations in other chloroplast‐encoded genes.
Significance Statement
A simplified transformation strategy was developed to perform site‐directed mutagenesis in the chloroplast‐encoded Rubisco large subunit of tobacco. This approach reduces unwanted mismatch repair events, enables rapid screening of transformed lines that possess desired mutations and can be applied to modify any chloroplast‐encoded gene in plant species amenable to plastid genome transformation.</abstract><cop>England</cop><pub>Blackwell Publishing Ltd</pub><pmid>33576096</pmid><doi>10.1111/tpj.15196</doi><tpages>12</tpages><orcidid>https://orcid.org/0000-0003-1217-537X</orcidid><orcidid>https://orcid.org/0000-0001-6059-9359</orcidid><orcidid>https://orcid.org/0000000160599359</orcidid><orcidid>https://orcid.org/000000031217537X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Carbon fixation Catalytic activity chloroplast transformation Chloroplasts Chloroplasts - genetics Crop production Enzymes food security Gene Editing - methods Genes, Plant - genetics Genetic transformation Homologous recombination Homology Kinases Mutation Nicotiana - enzymology Nicotiana - genetics Nicotiana tabacum Optimization Photosynthesis Point Mutation - genetics Ribulose-bisphosphate carboxylase Ribulose-Bisphosphate Carboxylase - genetics Ribulose-Bisphosphate Carboxylase - metabolism Rubisco site‐directed mutagenesis technical advance Tobacco Transformations |
title | A procedure to introduce point mutations into the Rubisco large subunit gene in wild‐type plants |
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