Burkholderia: An Untapped but Promising Bacterial Genus for the Conversion of Aromatic Compounds
Burkholderia, a bacterial genus comprising more than 120 species, is typically reported to inhabit soil and water environments. These Gram-negative bacteria harbor a variety of aromatic catabolic pathways and are thus potential organisms for bioremediation of sites contaminated with aromatic polluta...
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description | Burkholderia, a bacterial genus comprising more than 120 species, is typically reported to inhabit soil and water environments. These Gram-negative bacteria harbor a variety of aromatic catabolic pathways and are thus potential organisms for bioremediation of sites contaminated with aromatic pollutants. However, there are still substantial gaps in our knowledge of these catabolic processes that must be filled before these pathways and organisms can be harnessed for biotechnological applications. This review presents recent discoveries on the catabolism of monoaromatic and polycyclic aromatic hydrocarbons, as well as of heterocyclic compounds, by a diversity of Burkholderia strains. We also present a perspective on the beneficial features of Burkholderia spp. and future directions for their potential utilization in the bioremediation and bioconversion of aromatic compounds.
Burkholderia is a versatile genus that can tolerate and degrade a variety of aromatic compounds (monoaromatic, polycyclic aromatic, and heterocyclic). It is therefore an increasingly promising host for bioremediation and bioconversion applications.Despite the positive features of Burkholderia in degrading aromatic compounds and promoting plant growth, this genus remains understudied compared with other aromatic catabolizing bacteria.Modern systems biology tools (such as multi-omic analyses) and metabolic engineering are currently being applied to elucidate catabolic pathways in Burkholderia.Degradation studies in the presence of cosubstrates confirm the importance of considering the environmental conditions to reach better conclusions regarding bioremediation efficiency. |
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Burkholderia is a versatile genus that can tolerate and degrade a variety of aromatic compounds (monoaromatic, polycyclic aromatic, and heterocyclic). It is therefore an increasingly promising host for bioremediation and bioconversion applications.Despite the positive features of Burkholderia in degrading aromatic compounds and promoting plant growth, this genus remains understudied compared with other aromatic catabolizing bacteria.Modern systems biology tools (such as multi-omic analyses) and metabolic engineering are currently being applied to elucidate catabolic pathways in Burkholderia.Degradation studies in the presence of cosubstrates confirm the importance of considering the environmental conditions to reach better conclusions regarding bioremediation efficiency.</description><identifier>ISSN: 0167-7799</identifier><identifier>EISSN: 1879-3096</identifier><identifier>DOI: 10.1016/j.tibtech.2020.02.008</identifier><language>eng</language><publisher>Oxford: Elsevier Ltd</publisher><subject>Acids ; Aromatic compounds ; Bacteria ; BASIC BIOLOGICAL SCIENCES ; Bioconversion ; Biodegradation ; Bioremediation ; Biotechnology ; Burkholderia ; Carbon ; Catabolism ; Chemical spills ; Genes ; Genetic engineering ; Genomes ; Gram-negative bacteria ; Harbors ; Heterocyclic compounds ; Hydrocarbons ; Insecticides ; Lignin ; Metabolism ; Metabolites ; Natural resources ; Oxidation ; Oxidative stress ; Paraburkholderia ; pesticides ; Phenols ; Pollutants ; Polycyclic aromatic hydrocarbons ; Soil contamination ; Soil environment ; Soil water</subject><ispartof>Trends in biotechnology (Regular ed.), 2020-09, Vol.38 (9), p.963-975</ispartof><rights>2020 Elsevier Ltd</rights><rights>2020. Elsevier Ltd</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4258-afc360cb6218f939e136b2c7ea2deccef5d9b86cc312a177ada9e94e825d3f513</citedby><cites>FETCH-LOGICAL-c4258-afc360cb6218f939e136b2c7ea2deccef5d9b86cc312a177ada9e94e825d3f513</cites><orcidid>000000030799061X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.proquest.com/docview/2435179156?pq-origsite=primo$$EHTML$$P50$$Gproquest$$H</linktohtml><link.rule.ids>230,314,780,784,885,3550,27924,27925,45995,64385,64389,72469</link.rule.ids><backlink>$$Uhttps://www.osti.gov/servlets/purl/1659802$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Morya, Raj</creatorcontrib><creatorcontrib>Salvachúa, Davinia</creatorcontrib><creatorcontrib>Thakur, Indu Shekhar</creatorcontrib><creatorcontrib>National Renewable Energy Lab. (NREL), Golden, CO (United States)</creatorcontrib><title>Burkholderia: An Untapped but Promising Bacterial Genus for the Conversion of Aromatic Compounds</title><title>Trends in biotechnology (Regular ed.)</title><description>Burkholderia, a bacterial genus comprising more than 120 species, is typically reported to inhabit soil and water environments. These Gram-negative bacteria harbor a variety of aromatic catabolic pathways and are thus potential organisms for bioremediation of sites contaminated with aromatic pollutants. However, there are still substantial gaps in our knowledge of these catabolic processes that must be filled before these pathways and organisms can be harnessed for biotechnological applications. This review presents recent discoveries on the catabolism of monoaromatic and polycyclic aromatic hydrocarbons, as well as of heterocyclic compounds, by a diversity of Burkholderia strains. We also present a perspective on the beneficial features of Burkholderia spp. and future directions for their potential utilization in the bioremediation and bioconversion of aromatic compounds.
Burkholderia is a versatile genus that can tolerate and degrade a variety of aromatic compounds (monoaromatic, polycyclic aromatic, and heterocyclic). It is therefore an increasingly promising host for bioremediation and bioconversion applications.Despite the positive features of Burkholderia in degrading aromatic compounds and promoting plant growth, this genus remains understudied compared with other aromatic catabolizing bacteria.Modern systems biology tools (such as multi-omic analyses) and metabolic engineering are currently being applied to elucidate catabolic pathways in Burkholderia.Degradation studies in the presence of cosubstrates confirm the importance of considering the environmental conditions to reach better conclusions regarding bioremediation efficiency.</description><subject>Acids</subject><subject>Aromatic compounds</subject><subject>Bacteria</subject><subject>BASIC BIOLOGICAL SCIENCES</subject><subject>Bioconversion</subject><subject>Biodegradation</subject><subject>Bioremediation</subject><subject>Biotechnology</subject><subject>Burkholderia</subject><subject>Carbon</subject><subject>Catabolism</subject><subject>Chemical spills</subject><subject>Genes</subject><subject>Genetic engineering</subject><subject>Genomes</subject><subject>Gram-negative bacteria</subject><subject>Harbors</subject><subject>Heterocyclic compounds</subject><subject>Hydrocarbons</subject><subject>Insecticides</subject><subject>Lignin</subject><subject>Metabolism</subject><subject>Metabolites</subject><subject>Natural resources</subject><subject>Oxidation</subject><subject>Oxidative stress</subject><subject>Paraburkholderia</subject><subject>pesticides</subject><subject>Phenols</subject><subject>Pollutants</subject><subject>Polycyclic aromatic hydrocarbons</subject><subject>Soil contamination</subject><subject>Soil environment</subject><subject>Soil water</subject><issn>0167-7799</issn><issn>1879-3096</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqFkMtKBDEQRYMoOD4-QQi67jaP6UfcyDj4AkEXuo7ppNrJOJO0SVrw700z7l0VFOcWtw5CZ5SUlND6cl0m2yXQq5IRRkrCSkLaPTSjbSMKTkS9j2aZa4qmEeIQHcW4JoTwRtAZer8Zw-fKbwwEq67wwuE3l9QwgMHdmPBL8FsbrfvAN0qnidnge3BjxL0POK0AL737hhCtd9j3eJF5lazO6-3gR2fiCTro1SbC6d88Rm93t6_Lh-Lp-f5xuXgq9JxVbaF6zWuiu5rRthdcAOV1x3QDihnQGvrKiK6tteaUKdo0yigBYg4tqwzvK8qP0fnuro_JyqjtJER750AnSetKtIRl6GIHDcF_jRCTXPsxuNxLsjmvaFZS1ZmqdpQOPsYAvRyC3arwIymRk3G5ln_G5WRcEiaz8Zy73uUg__ltIUw1wGkwNkwtjLf_XPgFbQGM1w</recordid><startdate>20200901</startdate><enddate>20200901</enddate><creator>Morya, Raj</creator><creator>Salvachúa, Davinia</creator><creator>Thakur, Indu Shekhar</creator><general>Elsevier Ltd</general><general>Elsevier Limited</general><general>Elsevier</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QF</scope><scope>7QO</scope><scope>7QP</scope><scope>7QQ</scope><scope>7QR</scope><scope>7SC</scope><scope>7SE</scope><scope>7SP</scope><scope>7SR</scope><scope>7TA</scope><scope>7TB</scope><scope>7TK</scope><scope>7U5</scope><scope>7X7</scope><scope>7XB</scope><scope>88C</scope><scope>88E</scope><scope>8AO</scope><scope>8BQ</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F28</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H8D</scope><scope>H8G</scope><scope>HCIFZ</scope><scope>JG9</scope><scope>JQ2</scope><scope>K9.</scope><scope>KR7</scope><scope>L6V</scope><scope>L7M</scope><scope>LK8</scope><scope>L~C</scope><scope>L~D</scope><scope>M0S</scope><scope>M0T</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>M7S</scope><scope>MBDVC</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>Q9U</scope><scope>OIOZB</scope><scope>OTOTI</scope><orcidid>https://orcid.org/000000030799061X</orcidid></search><sort><creationdate>20200901</creationdate><title>Burkholderia: An Untapped but Promising Bacterial Genus for the Conversion of Aromatic Compounds</title><author>Morya, Raj ; 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(NREL), Golden, CO (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Burkholderia: An Untapped but Promising Bacterial Genus for the Conversion of Aromatic Compounds</atitle><jtitle>Trends in biotechnology (Regular ed.)</jtitle><date>2020-09-01</date><risdate>2020</risdate><volume>38</volume><issue>9</issue><spage>963</spage><epage>975</epage><pages>963-975</pages><issn>0167-7799</issn><eissn>1879-3096</eissn><abstract>Burkholderia, a bacterial genus comprising more than 120 species, is typically reported to inhabit soil and water environments. These Gram-negative bacteria harbor a variety of aromatic catabolic pathways and are thus potential organisms for bioremediation of sites contaminated with aromatic pollutants. However, there are still substantial gaps in our knowledge of these catabolic processes that must be filled before these pathways and organisms can be harnessed for biotechnological applications. This review presents recent discoveries on the catabolism of monoaromatic and polycyclic aromatic hydrocarbons, as well as of heterocyclic compounds, by a diversity of Burkholderia strains. We also present a perspective on the beneficial features of Burkholderia spp. and future directions for their potential utilization in the bioremediation and bioconversion of aromatic compounds.
Burkholderia is a versatile genus that can tolerate and degrade a variety of aromatic compounds (monoaromatic, polycyclic aromatic, and heterocyclic). It is therefore an increasingly promising host for bioremediation and bioconversion applications.Despite the positive features of Burkholderia in degrading aromatic compounds and promoting plant growth, this genus remains understudied compared with other aromatic catabolizing bacteria.Modern systems biology tools (such as multi-omic analyses) and metabolic engineering are currently being applied to elucidate catabolic pathways in Burkholderia.Degradation studies in the presence of cosubstrates confirm the importance of considering the environmental conditions to reach better conclusions regarding bioremediation efficiency.</abstract><cop>Oxford</cop><pub>Elsevier Ltd</pub><doi>10.1016/j.tibtech.2020.02.008</doi><tpages>13</tpages><orcidid>https://orcid.org/000000030799061X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Acids Aromatic compounds Bacteria BASIC BIOLOGICAL SCIENCES Bioconversion Biodegradation Bioremediation Biotechnology Burkholderia Carbon Catabolism Chemical spills Genes Genetic engineering Genomes Gram-negative bacteria Harbors Heterocyclic compounds Hydrocarbons Insecticides Lignin Metabolism Metabolites Natural resources Oxidation Oxidative stress Paraburkholderia pesticides Phenols Pollutants Polycyclic aromatic hydrocarbons Soil contamination Soil environment Soil water |
title | Burkholderia: An Untapped but Promising Bacterial Genus for the Conversion of Aromatic Compounds |
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