NMR and crystallographic structural studies of the extremely stable monomeric variant of human cystatin C with single amino acid substitution

Human cystatin C (hCC), a member of the superfamily of papain‐like cysteine protease inhibitors, is the most widespread cystatin in human body fluids. This small protein, in addition to its physiological function, is involved in various diseases, including cerebral amyloid angiopathy, cerebral hemor...

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Veröffentlicht in:The FEBS journal 2020-01, Vol.287 (2), p.361-376
Hauptverfasser: Maszota‐Zieleniak, Martyna, Jurczak, Przemyslaw, Orlikowska, Marta, Zhukov, Igor, Borek, Dominika, Otwinowski, Zbyszek, Skowron, Piotr, Pietralik, Zuzanna, Kozak, Maciej, Szymańska, Aneta, Rodziewicz‐Motowidło, Sylwia
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container_title The FEBS journal
container_volume 287
creator Maszota‐Zieleniak, Martyna
Jurczak, Przemyslaw
Orlikowska, Marta
Zhukov, Igor
Borek, Dominika
Otwinowski, Zbyszek
Skowron, Piotr
Pietralik, Zuzanna
Kozak, Maciej
Szymańska, Aneta
Rodziewicz‐Motowidło, Sylwia
description Human cystatin C (hCC), a member of the superfamily of papain‐like cysteine protease inhibitors, is the most widespread cystatin in human body fluids. This small protein, in addition to its physiological function, is involved in various diseases, including cerebral amyloid angiopathy, cerebral hemorrhage, stroke, and dementia. Physiologically active hCC is a monomer. However, all structural studies based on crystallization led to the dimeric structure formed as a result of a three‐dimensional exchange of the protein domains (3D domain swapping). The monomeric structure was obtained only for hCC variant V57N and for the protein stabilized by an additional disulfide bridge. With this study, we extend the number of models of monomeric hCC by an additional hCC variant with a single amino acid substitution in the flexible loop L1. The V57G variant was chosen for the X‐ray and NMR structural analysis due to its exceptional conformational stability in solution. In this work, we show for the first time the structural and dynamics studies of human cystatin C variant in solution. We were also able to compare these data with the crystal structure of the hCC V57G and with other cystatins. The overall cystatin fold is retained in the solute form. Additionally, structural information concerning the N terminus was obtained during our studies and presented for the first time. Database Crystallographic structure: structural data are available in PDB databases under the accession number 6ROA. NMR structure: structural data are available in PDB and BMRB databases under the accession numbers 6RPV and 34399, respectively. Human cystatin C (hCC), a cysteine protease inhibitor, is the most widespread cystatin in human body fluids. In addition to physiological functions, it is involved in various diseases, including cerebral amyloid angiopathy, cerebral hemorrhage, and dementia. With this study, we extend the number of X‐ray and NMR structural models of monomeric hCC by an additional variant exhibiting exceptional conformational stability.
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(ANL), Argonne, IL (United States). Advanced Photon Source (APS)</creatorcontrib><description>Human cystatin C (hCC), a member of the superfamily of papain‐like cysteine protease inhibitors, is the most widespread cystatin in human body fluids. This small protein, in addition to its physiological function, is involved in various diseases, including cerebral amyloid angiopathy, cerebral hemorrhage, stroke, and dementia. Physiologically active hCC is a monomer. However, all structural studies based on crystallization led to the dimeric structure formed as a result of a three‐dimensional exchange of the protein domains (3D domain swapping). The monomeric structure was obtained only for hCC variant V57N and for the protein stabilized by an additional disulfide bridge. With this study, we extend the number of models of monomeric hCC by an additional hCC variant with a single amino acid substitution in the flexible loop L1. The V57G variant was chosen for the X‐ray and NMR structural analysis due to its exceptional conformational stability in solution. In this work, we show for the first time the structural and dynamics studies of human cystatin C variant in solution. We were also able to compare these data with the crystal structure of the hCC V57G and with other cystatins. The overall cystatin fold is retained in the solute form. Additionally, structural information concerning the N terminus was obtained during our studies and presented for the first time. Database Crystallographic structure: structural data are available in PDB databases under the accession number 6ROA. NMR structure: structural data are available in PDB and BMRB databases under the accession numbers 6RPV and 34399, respectively. Human cystatin C (hCC), a cysteine protease inhibitor, is the most widespread cystatin in human body fluids. 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(ANL), Argonne, IL (United States). Advanced Photon Source (APS)</creatorcontrib><title>NMR and crystallographic structural studies of the extremely stable monomeric variant of human cystatin C with single amino acid substitution</title><title>The FEBS journal</title><addtitle>FEBS J</addtitle><description>Human cystatin C (hCC), a member of the superfamily of papain‐like cysteine protease inhibitors, is the most widespread cystatin in human body fluids. This small protein, in addition to its physiological function, is involved in various diseases, including cerebral amyloid angiopathy, cerebral hemorrhage, stroke, and dementia. Physiologically active hCC is a monomer. However, all structural studies based on crystallization led to the dimeric structure formed as a result of a three‐dimensional exchange of the protein domains (3D domain swapping). The monomeric structure was obtained only for hCC variant V57N and for the protein stabilized by an additional disulfide bridge. With this study, we extend the number of models of monomeric hCC by an additional hCC variant with a single amino acid substitution in the flexible loop L1. The V57G variant was chosen for the X‐ray and NMR structural analysis due to its exceptional conformational stability in solution. In this work, we show for the first time the structural and dynamics studies of human cystatin C variant in solution. We were also able to compare these data with the crystal structure of the hCC V57G and with other cystatins. The overall cystatin fold is retained in the solute form. Additionally, structural information concerning the N terminus was obtained during our studies and presented for the first time. Database Crystallographic structure: structural data are available in PDB databases under the accession number 6ROA. NMR structure: structural data are available in PDB and BMRB databases under the accession numbers 6RPV and 34399, respectively. Human cystatin C (hCC), a cysteine protease inhibitor, is the most widespread cystatin in human body fluids. In addition to physiological functions, it is involved in various diseases, including cerebral amyloid angiopathy, cerebral hemorrhage, and dementia. 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However, all structural studies based on crystallization led to the dimeric structure formed as a result of a three‐dimensional exchange of the protein domains (3D domain swapping). The monomeric structure was obtained only for hCC variant V57N and for the protein stabilized by an additional disulfide bridge. With this study, we extend the number of models of monomeric hCC by an additional hCC variant with a single amino acid substitution in the flexible loop L1. The V57G variant was chosen for the X‐ray and NMR structural analysis due to its exceptional conformational stability in solution. In this work, we show for the first time the structural and dynamics studies of human cystatin C variant in solution. We were also able to compare these data with the crystal structure of the hCC V57G and with other cystatins. The overall cystatin fold is retained in the solute form. 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subjects Amino acid substitution
Amino acids
Amyloid
Body fluids
Cerebral amyloid angiopathy
Computational fluid dynamics
Crystal structure
Crystallization
Crystallography
Cystatin C
Cysteine proteinase
Dementia disorders
Disulfide bonds
Dynamic structural analysis
hCC V57G variant
Hemorrhage
human cystatin C
NMR
Nuclear magnetic resonance
Papain
Protease inhibitors
protein structure
Proteinase inhibitors
Proteins
Stability analysis
Structural analysis
Substitutes
X‐ray
title NMR and crystallographic structural studies of the extremely stable monomeric variant of human cystatin C with single amino acid substitution
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