Carbonate-sensitive phytotransferrin controls high-affinity iron uptake in diatoms
Phytotransferrin, a functional analogue of transferrin, has an obligate requirement for carbonate to bind iron, which suggests that acidification-driven declines in the concentration of seawater carbonate ions may negatively affect diatom iron acquisition. Iron binding in phytoplankton Iron is an es...
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creator | McQuaid, Jeffrey B. Kustka, Adam B. Oborník, Miroslav Horák, Aleš McCrow, John P. Karas, Bogumil J. Zheng, Hong Kindeberg, Theodor Andersson, Andreas J. Barbeau, Katherine A. Allen, Andrew E. |
description | Phytotransferrin, a functional analogue of transferrin, has an obligate requirement for carbonate to bind iron, which suggests that acidification-driven declines in the concentration of seawater carbonate ions may negatively affect diatom iron acquisition.
Iron binding in phytoplankton
Iron is an essential nutrient for photosynthetic plankton (phytoplankton), but owing to its low solubility in vast areas of the ocean the concentration of this metal is low, limiting the growth of the phytoplankton. Andrew Allen and co-workers show that the phytoplankton
Phaeodactylum tricornutum
has developed a specific iron acquisition mechanism that relies on activity of the ISIP2A protein. ISIP2A represents a functional analogue of transferrin—a metazoan protein that binds iron with high affinity—as both proteins use similar iron binding, internalization and release mechanisms, suggesting their independent and convergent evolution. Both proteins bind iron through a synergistic interaction of ferric iron and CO
3
2−
, and because ocean acidification decreases CO
3
2−
concentration it may also decrease phytoplankton iron uptake and growth.
In vast areas of the ocean, the scarcity of iron controls the growth and productivity of phytoplankton
1
,
2
. Although most dissolved iron in the marine environment is complexed with organic molecules
3
, picomolar amounts of labile inorganic iron species (labile iron) are maintained within the euphotic zone
4
and serve as an important source of iron for eukaryotic phytoplankton and particularly for diatoms
5
. Genome-enabled studies of labile iron utilization by diatoms have previously revealed novel iron-responsive transcripts
6
,
7
, including the ferric iron-concentrating protein ISIP2A
8
, but the mechanism behind the acquisition of picomolar labile iron remains unknown. Here we show that ISIP2A is a phytotransferrin that independently and convergently evolved carbonate ion-coordinated ferric iron binding. Deletion of
ISIP2A
disrupts high-affinity iron uptake in the diatom
Phaeodactylum tricornutum
, and uptake is restored by complementation with human transferrin. ISIP2A is internalized by endocytosis, and manipulation of the seawater carbonic acid system reveals a second-order dependence on the concentrations of labile iron and carbonate ions. In
P. tricornutum
, the synergistic interaction of labile iron and carbonate ions occurs at environmentally relevant concentrations, revealing that carbonate availability co-limits iron upt |
doi_str_mv | 10.1038/nature25982 |
format | Article |
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Iron binding in phytoplankton
Iron is an essential nutrient for photosynthetic plankton (phytoplankton), but owing to its low solubility in vast areas of the ocean the concentration of this metal is low, limiting the growth of the phytoplankton. Andrew Allen and co-workers show that the phytoplankton
Phaeodactylum tricornutum
has developed a specific iron acquisition mechanism that relies on activity of the ISIP2A protein. ISIP2A represents a functional analogue of transferrin—a metazoan protein that binds iron with high affinity—as both proteins use similar iron binding, internalization and release mechanisms, suggesting their independent and convergent evolution. Both proteins bind iron through a synergistic interaction of ferric iron and CO
3
2−
, and because ocean acidification decreases CO
3
2−
concentration it may also decrease phytoplankton iron uptake and growth.
In vast areas of the ocean, the scarcity of iron controls the growth and productivity of phytoplankton
1
,
2
. Although most dissolved iron in the marine environment is complexed with organic molecules
3
, picomolar amounts of labile inorganic iron species (labile iron) are maintained within the euphotic zone
4
and serve as an important source of iron for eukaryotic phytoplankton and particularly for diatoms
5
. Genome-enabled studies of labile iron utilization by diatoms have previously revealed novel iron-responsive transcripts
6
,
7
, including the ferric iron-concentrating protein ISIP2A
8
, but the mechanism behind the acquisition of picomolar labile iron remains unknown. Here we show that ISIP2A is a phytotransferrin that independently and convergently evolved carbonate ion-coordinated ferric iron binding. Deletion of
ISIP2A
disrupts high-affinity iron uptake in the diatom
Phaeodactylum tricornutum
, and uptake is restored by complementation with human transferrin. ISIP2A is internalized by endocytosis, and manipulation of the seawater carbonic acid system reveals a second-order dependence on the concentrations of labile iron and carbonate ions. In
P. tricornutum
, the synergistic interaction of labile iron and carbonate ions occurs at environmentally relevant concentrations, revealing that carbonate availability co-limits iron uptake. Phytotransferrin sequences have a broad taxonomic distribution
8
and are abundant in marine environmental genomic datasets
9
,
10
, suggesting that acidification-driven declines in the concentration of seawater carbonate ions will have a negative effect on this globally important eukaryotic iron acquisition mechanism.</description><identifier>ISSN: 0028-0836</identifier><identifier>EISSN: 1476-4687</identifier><identifier>DOI: 10.1038/nature25982</identifier><identifier>PMID: 29539640</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>38/70 ; 45/77 ; 631/158/2446/2447 ; 631/158/47/4112 ; 631/181/735 ; 704/106/694 ; 704/829/826 ; 82/1 ; 96/35 ; 96/44 ; 96/63 ; Acidification ; Affinity ; Bacillariophyta ; Bioinformatics ; Carbon dioxide ; Carbonates ; Carbonic acid ; Complementation ; Diatoms ; Endocytosis ; Environmental Sciences ; Euphotic zone ; Genes ; Genomes ; Humanities and Social Sciences ; Ions ; Iron ; Iron (Nutrient) ; letter ; Marine environment ; multidisciplinary ; Mutagenesis ; Organic chemistry ; Phaeodactylum tricornutum ; Phylogenetics ; Physiological aspects ; Phytoplankton ; Proteins ; Science ; Science & Technology - Other Topics ; Seawater ; Short term ; Transferrin ; Transferrins</subject><ispartof>Nature (London), 2018-03, Vol.555 (7697), p.534-537</ispartof><rights>Macmillan Publishers Limited, part of Springer Nature. All rights reserved. 2018</rights><rights>COPYRIGHT 2018 Nature Publishing Group</rights><rights>Copyright Nature Publishing Group Mar 22, 2018</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c581t-6730acc6e0c24d3bd0cb4a3b940a4b7e0456bebfc1e73c63c4906fec29d279993</citedby><cites>FETCH-LOGICAL-c581t-6730acc6e0c24d3bd0cb4a3b940a4b7e0456bebfc1e73c63c4906fec29d279993</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/nature25982$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/nature25982$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,776,780,881,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29539640$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-04869339$$DView record in HAL$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/biblio/1539775$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>McQuaid, Jeffrey B.</creatorcontrib><creatorcontrib>Kustka, Adam B.</creatorcontrib><creatorcontrib>Oborník, Miroslav</creatorcontrib><creatorcontrib>Horák, Aleš</creatorcontrib><creatorcontrib>McCrow, John P.</creatorcontrib><creatorcontrib>Karas, Bogumil J.</creatorcontrib><creatorcontrib>Zheng, Hong</creatorcontrib><creatorcontrib>Kindeberg, Theodor</creatorcontrib><creatorcontrib>Andersson, Andreas J.</creatorcontrib><creatorcontrib>Barbeau, Katherine A.</creatorcontrib><creatorcontrib>Allen, Andrew E.</creatorcontrib><creatorcontrib>J. Craig Venter Inst., Inc., Rockville, MD (United States)</creatorcontrib><title>Carbonate-sensitive phytotransferrin controls high-affinity iron uptake in diatoms</title><title>Nature (London)</title><addtitle>Nature</addtitle><addtitle>Nature</addtitle><description>Phytotransferrin, a functional analogue of transferrin, has an obligate requirement for carbonate to bind iron, which suggests that acidification-driven declines in the concentration of seawater carbonate ions may negatively affect diatom iron acquisition.
Iron binding in phytoplankton
Iron is an essential nutrient for photosynthetic plankton (phytoplankton), but owing to its low solubility in vast areas of the ocean the concentration of this metal is low, limiting the growth of the phytoplankton. Andrew Allen and co-workers show that the phytoplankton
Phaeodactylum tricornutum
has developed a specific iron acquisition mechanism that relies on activity of the ISIP2A protein. ISIP2A represents a functional analogue of transferrin—a metazoan protein that binds iron with high affinity—as both proteins use similar iron binding, internalization and release mechanisms, suggesting their independent and convergent evolution. Both proteins bind iron through a synergistic interaction of ferric iron and CO
3
2−
, and because ocean acidification decreases CO
3
2−
concentration it may also decrease phytoplankton iron uptake and growth.
In vast areas of the ocean, the scarcity of iron controls the growth and productivity of phytoplankton
1
,
2
. Although most dissolved iron in the marine environment is complexed with organic molecules
3
, picomolar amounts of labile inorganic iron species (labile iron) are maintained within the euphotic zone
4
and serve as an important source of iron for eukaryotic phytoplankton and particularly for diatoms
5
. Genome-enabled studies of labile iron utilization by diatoms have previously revealed novel iron-responsive transcripts
6
,
7
, including the ferric iron-concentrating protein ISIP2A
8
, but the mechanism behind the acquisition of picomolar labile iron remains unknown. Here we show that ISIP2A is a phytotransferrin that independently and convergently evolved carbonate ion-coordinated ferric iron binding. Deletion of
ISIP2A
disrupts high-affinity iron uptake in the diatom
Phaeodactylum tricornutum
, and uptake is restored by complementation with human transferrin. ISIP2A is internalized by endocytosis, and manipulation of the seawater carbonic acid system reveals a second-order dependence on the concentrations of labile iron and carbonate ions. In
P. tricornutum
, the synergistic interaction of labile iron and carbonate ions occurs at environmentally relevant concentrations, revealing that carbonate availability co-limits iron uptake. Phytotransferrin sequences have a broad taxonomic distribution
8
and are abundant in marine environmental genomic datasets
9
,
10
, suggesting that acidification-driven declines in the concentration of seawater carbonate ions will have a negative effect on this globally important eukaryotic iron acquisition mechanism.</description><subject>38/70</subject><subject>45/77</subject><subject>631/158/2446/2447</subject><subject>631/158/47/4112</subject><subject>631/181/735</subject><subject>704/106/694</subject><subject>704/829/826</subject><subject>82/1</subject><subject>96/35</subject><subject>96/44</subject><subject>96/63</subject><subject>Acidification</subject><subject>Affinity</subject><subject>Bacillariophyta</subject><subject>Bioinformatics</subject><subject>Carbon dioxide</subject><subject>Carbonates</subject><subject>Carbonic acid</subject><subject>Complementation</subject><subject>Diatoms</subject><subject>Endocytosis</subject><subject>Environmental Sciences</subject><subject>Euphotic zone</subject><subject>Genes</subject><subject>Genomes</subject><subject>Humanities and Social Sciences</subject><subject>Ions</subject><subject>Iron</subject><subject>Iron (Nutrient)</subject><subject>letter</subject><subject>Marine environment</subject><subject>multidisciplinary</subject><subject>Mutagenesis</subject><subject>Organic chemistry</subject><subject>Phaeodactylum tricornutum</subject><subject>Phylogenetics</subject><subject>Physiological aspects</subject><subject>Phytoplankton</subject><subject>Proteins</subject><subject>Science</subject><subject>Science & Technology - Other Topics</subject><subject>Seawater</subject><subject>Short 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Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>OSTI.GOV</collection><jtitle>Nature (London)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>McQuaid, Jeffrey B.</au><au>Kustka, Adam B.</au><au>Oborník, Miroslav</au><au>Horák, Aleš</au><au>McCrow, John P.</au><au>Karas, Bogumil J.</au><au>Zheng, Hong</au><au>Kindeberg, Theodor</au><au>Andersson, Andreas J.</au><au>Barbeau, Katherine A.</au><au>Allen, Andrew E.</au><aucorp>J. Craig Venter Inst., Inc., Rockville, MD (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Carbonate-sensitive phytotransferrin controls high-affinity iron uptake in diatoms</atitle><jtitle>Nature (London)</jtitle><stitle>Nature</stitle><addtitle>Nature</addtitle><date>2018-03-22</date><risdate>2018</risdate><volume>555</volume><issue>7697</issue><spage>534</spage><epage>537</epage><pages>534-537</pages><issn>0028-0836</issn><eissn>1476-4687</eissn><abstract>Phytotransferrin, a functional analogue of transferrin, has an obligate requirement for carbonate to bind iron, which suggests that acidification-driven declines in the concentration of seawater carbonate ions may negatively affect diatom iron acquisition.
Iron binding in phytoplankton
Iron is an essential nutrient for photosynthetic plankton (phytoplankton), but owing to its low solubility in vast areas of the ocean the concentration of this metal is low, limiting the growth of the phytoplankton. Andrew Allen and co-workers show that the phytoplankton
Phaeodactylum tricornutum
has developed a specific iron acquisition mechanism that relies on activity of the ISIP2A protein. ISIP2A represents a functional analogue of transferrin—a metazoan protein that binds iron with high affinity—as both proteins use similar iron binding, internalization and release mechanisms, suggesting their independent and convergent evolution. Both proteins bind iron through a synergistic interaction of ferric iron and CO
3
2−
, and because ocean acidification decreases CO
3
2−
concentration it may also decrease phytoplankton iron uptake and growth.
In vast areas of the ocean, the scarcity of iron controls the growth and productivity of phytoplankton
1
,
2
. Although most dissolved iron in the marine environment is complexed with organic molecules
3
, picomolar amounts of labile inorganic iron species (labile iron) are maintained within the euphotic zone
4
and serve as an important source of iron for eukaryotic phytoplankton and particularly for diatoms
5
. Genome-enabled studies of labile iron utilization by diatoms have previously revealed novel iron-responsive transcripts
6
,
7
, including the ferric iron-concentrating protein ISIP2A
8
, but the mechanism behind the acquisition of picomolar labile iron remains unknown. Here we show that ISIP2A is a phytotransferrin that independently and convergently evolved carbonate ion-coordinated ferric iron binding. Deletion of
ISIP2A
disrupts high-affinity iron uptake in the diatom
Phaeodactylum tricornutum
, and uptake is restored by complementation with human transferrin. ISIP2A is internalized by endocytosis, and manipulation of the seawater carbonic acid system reveals a second-order dependence on the concentrations of labile iron and carbonate ions. In
P. tricornutum
, the synergistic interaction of labile iron and carbonate ions occurs at environmentally relevant concentrations, revealing that carbonate availability co-limits iron uptake. Phytotransferrin sequences have a broad taxonomic distribution
8
and are abundant in marine environmental genomic datasets
9
,
10
, suggesting that acidification-driven declines in the concentration of seawater carbonate ions will have a negative effect on this globally important eukaryotic iron acquisition mechanism.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>29539640</pmid><doi>10.1038/nature25982</doi><tpages>4</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0028-0836 |
ispartof | Nature (London), 2018-03, Vol.555 (7697), p.534-537 |
issn | 0028-0836 1476-4687 |
language | eng |
recordid | cdi_osti_scitechconnect_1539775 |
source | Nature; Springer Nature - Complete Springer Journals |
subjects | 38/70 45/77 631/158/2446/2447 631/158/47/4112 631/181/735 704/106/694 704/829/826 82/1 96/35 96/44 96/63 Acidification Affinity Bacillariophyta Bioinformatics Carbon dioxide Carbonates Carbonic acid Complementation Diatoms Endocytosis Environmental Sciences Euphotic zone Genes Genomes Humanities and Social Sciences Ions Iron Iron (Nutrient) letter Marine environment multidisciplinary Mutagenesis Organic chemistry Phaeodactylum tricornutum Phylogenetics Physiological aspects Phytoplankton Proteins Science Science & Technology - Other Topics Seawater Short term Transferrin Transferrins |
title | Carbonate-sensitive phytotransferrin controls high-affinity iron uptake in diatoms |
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