Amino acid δ¹⁵N indicates lack of N isotope fractionation during soil organic nitrogen decomposition
The interpretation of natural abundance δ¹⁵N in soil profiles and across ecosystems is confounded by a lack of understanding of possible N isotope fractionation associated with soil organic nitrogen (SON) decomposition. We analyzed the δ¹⁵N of hydrolysable amino acids to test the extent of fractiona...
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description | The interpretation of natural abundance δ¹⁵N in soil profiles and across ecosystems is confounded by a lack of understanding of possible N isotope fractionation associated with soil organic nitrogen (SON) decomposition. We analyzed the δ¹⁵N of hydrolysable amino acids to test the extent of fractionation associated with the depolymerization of peptides to amino acids and the mineralization of amino acids to NH₄⁺ (ammonification). Most amino acids are both synthesized and degraded by microbes, complicating interpretation of their δ¹⁵N. However, the “source” amino acids phenylalanine and hydroxyproline are degraded and recycled but not resynthesized. We therefore used their δ¹⁵N to isolate the effects of N isotope fractionation during SON depolymerization and ammonification. We used complementary field and laboratory approaches to evaluate the change in amino acid δ¹⁵N during decomposition. First, we measured amino acid δ¹⁵N changes with depth in the organic horizons of podzolic soils collected from the Newfoundland and Labrador Boreal Ecosystem Latitudinal Transect (NL-BELT), Canada. The δ¹⁵N of most amino acids increased with depth by 3–7‰, similar to the increase in bulk δ¹⁵N. However, the δ¹⁵N of the “source” amino acids did not change with depth, indicating lack of N isotope fractionation during their depolymerization and ammonification. Second, we assessed the change in amino acid δ¹⁵N following 400 days of laboratory incubation. This approach isolated the effect of decomposition on δ¹⁵N by eliminating plant N uptake and reducing leaching of N from the soil. Amino acid δ¹⁵N did not change during incubation despite extensive turnover of the amino acid pool, supporting our conclusion of a lack of N isotope fractionation during SON decomposition. Our results indicate the often-observed trend of increasing δ¹⁵N with soil depth likely results from the mycorrhizally-mediated transfer of ¹⁴N from depth to the surface and accumulation of ¹⁵N-enriched necromass of diverse soil microbes at depth, rather than as a direct result of SON decomposition. |
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(ORNL), Oak Ridge, TN (United States)</creatorcontrib><description>The interpretation of natural abundance δ¹⁵N in soil profiles and across ecosystems is confounded by a lack of understanding of possible N isotope fractionation associated with soil organic nitrogen (SON) decomposition. We analyzed the δ¹⁵N of hydrolysable amino acids to test the extent of fractionation associated with the depolymerization of peptides to amino acids and the mineralization of amino acids to NH₄⁺ (ammonification). Most amino acids are both synthesized and degraded by microbes, complicating interpretation of their δ¹⁵N. However, the “source” amino acids phenylalanine and hydroxyproline are degraded and recycled but not resynthesized. We therefore used their δ¹⁵N to isolate the effects of N isotope fractionation during SON depolymerization and ammonification. We used complementary field and laboratory approaches to evaluate the change in amino acid δ¹⁵N during decomposition. First, we measured amino acid δ¹⁵N changes with depth in the organic horizons of podzolic soils collected from the Newfoundland and Labrador Boreal Ecosystem Latitudinal Transect (NL-BELT), Canada. The δ¹⁵N of most amino acids increased with depth by 3–7‰, similar to the increase in bulk δ¹⁵N. However, the δ¹⁵N of the “source” amino acids did not change with depth, indicating lack of N isotope fractionation during their depolymerization and ammonification. Second, we assessed the change in amino acid δ¹⁵N following 400 days of laboratory incubation. This approach isolated the effect of decomposition on δ¹⁵N by eliminating plant N uptake and reducing leaching of N from the soil. Amino acid δ¹⁵N did not change during incubation despite extensive turnover of the amino acid pool, supporting our conclusion of a lack of N isotope fractionation during SON decomposition. Our results indicate the often-observed trend of increasing δ¹⁵N with soil depth likely results from the mycorrhizally-mediated transfer of ¹⁴N from depth to the surface and accumulation of ¹⁵N-enriched necromass of diverse soil microbes at depth, rather than as a direct result of SON decomposition.</description><identifier>ISSN: 0168-2563</identifier><identifier>EISSN: 1573-515X</identifier><identifier>DOI: 10.1007/s10533-018-0429-y</identifier><language>eng</language><publisher>Cham: Springer Science + Business Media</publisher><subject>Acidic soils ; Amino acid sequence ; Amino acid stable isotopes ; Amino acids ; Ammonification ; BASIC BIOLOGICAL SCIENCES ; Biogeosciences ; Boreal ecosystems ; Decomposition ; Depolymerization ; Depth ; Earth and Environmental Science ; Earth Sciences ; Ecosystems ; Environmental Chemistry ; Fractionation ; Hydroxyproline ; Incubation period ; Isotope fractionation ; Isotopes ; Laboratories ; Leaching ; Life Sciences ; Mineralization ; Nitrogen ; Nitrogen isotope fractionation ; Nitrogen isotopes ; Organic nitrogen ; Organic soils ; ORIGINAL PAPERS ; Peptides ; Phenylalanine ; Podzolic soils ; Profiles ; Soil ; Soil depth ; Soil microorganisms ; Soil organic nitrogen ; Soil profiles ; Soil properties ; Soils ; Uptake ; δ15N</subject><ispartof>Biogeochemistry, 2018-03, Vol.138 (1), p.69-83</ispartof><rights>Springer International Publishing AG, part of Springer Nature 2018</rights><rights>Biogeochemistry is a copyright of Springer, (2018). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c253y-f4c87da550451ba3c03da75b1cdb27617b41dd89d105ba199c7a771c9c177b423</citedby><cites>FETCH-LOGICAL-c253y-f4c87da550451ba3c03da75b1cdb27617b41dd89d105ba199c7a771c9c177b423</cites><orcidid>0000-0002-8598-9043 ; 0000000285989043</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/48720372$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/48720372$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,780,784,803,885,27922,27923,41486,42555,51317,58015,58248</link.rule.ids><backlink>$$Uhttps://www.osti.gov/servlets/purl/1474866$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Philben, Michael</creatorcontrib><creatorcontrib>Billings, Sharon A.</creatorcontrib><creatorcontrib>Edwards, Kate A.</creatorcontrib><creatorcontrib>Podrebarac, Frances A.</creatorcontrib><creatorcontrib>van Biesen, Geert</creatorcontrib><creatorcontrib>Ziegler, Susan E.</creatorcontrib><creatorcontrib>Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)</creatorcontrib><title>Amino acid δ¹⁵N indicates lack of N isotope fractionation during soil organic nitrogen decomposition</title><title>Biogeochemistry</title><addtitle>Biogeochemistry</addtitle><description>The interpretation of natural abundance δ¹⁵N in soil profiles and across ecosystems is confounded by a lack of understanding of possible N isotope fractionation associated with soil organic nitrogen (SON) decomposition. We analyzed the δ¹⁵N of hydrolysable amino acids to test the extent of fractionation associated with the depolymerization of peptides to amino acids and the mineralization of amino acids to NH₄⁺ (ammonification). Most amino acids are both synthesized and degraded by microbes, complicating interpretation of their δ¹⁵N. However, the “source” amino acids phenylalanine and hydroxyproline are degraded and recycled but not resynthesized. We therefore used their δ¹⁵N to isolate the effects of N isotope fractionation during SON depolymerization and ammonification. We used complementary field and laboratory approaches to evaluate the change in amino acid δ¹⁵N during decomposition. First, we measured amino acid δ¹⁵N changes with depth in the organic horizons of podzolic soils collected from the Newfoundland and Labrador Boreal Ecosystem Latitudinal Transect (NL-BELT), Canada. The δ¹⁵N of most amino acids increased with depth by 3–7‰, similar to the increase in bulk δ¹⁵N. However, the δ¹⁵N of the “source” amino acids did not change with depth, indicating lack of N isotope fractionation during their depolymerization and ammonification. Second, we assessed the change in amino acid δ¹⁵N following 400 days of laboratory incubation. This approach isolated the effect of decomposition on δ¹⁵N by eliminating plant N uptake and reducing leaching of N from the soil. Amino acid δ¹⁵N did not change during incubation despite extensive turnover of the amino acid pool, supporting our conclusion of a lack of N isotope fractionation during SON decomposition. Our results indicate the often-observed trend of increasing δ¹⁵N with soil depth likely results from the mycorrhizally-mediated transfer of ¹⁴N from depth to the surface and accumulation of ¹⁵N-enriched necromass of diverse soil microbes at depth, rather than as a direct result of SON decomposition.</description><subject>Acidic soils</subject><subject>Amino acid sequence</subject><subject>Amino acid stable isotopes</subject><subject>Amino acids</subject><subject>Ammonification</subject><subject>BASIC BIOLOGICAL SCIENCES</subject><subject>Biogeosciences</subject><subject>Boreal ecosystems</subject><subject>Decomposition</subject><subject>Depolymerization</subject><subject>Depth</subject><subject>Earth and Environmental Science</subject><subject>Earth Sciences</subject><subject>Ecosystems</subject><subject>Environmental Chemistry</subject><subject>Fractionation</subject><subject>Hydroxyproline</subject><subject>Incubation period</subject><subject>Isotope fractionation</subject><subject>Isotopes</subject><subject>Laboratories</subject><subject>Leaching</subject><subject>Life Sciences</subject><subject>Mineralization</subject><subject>Nitrogen</subject><subject>Nitrogen isotope fractionation</subject><subject>Nitrogen isotopes</subject><subject>Organic nitrogen</subject><subject>Organic soils</subject><subject>ORIGINAL PAPERS</subject><subject>Peptides</subject><subject>Phenylalanine</subject><subject>Podzolic soils</subject><subject>Profiles</subject><subject>Soil</subject><subject>Soil depth</subject><subject>Soil microorganisms</subject><subject>Soil organic nitrogen</subject><subject>Soil profiles</subject><subject>Soil properties</subject><subject>Soils</subject><subject>Uptake</subject><subject>δ15N</subject><issn>0168-2563</issn><issn>1573-515X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kD1uFDEUxy0EEkvgABRIVqgn-Nnj8UwZReRDikITJDrL8-zZeNm1B9tbbMmdkoI2B-AQOQkzmgg6Glvy_-M9_wh5D-wEGFOfMjApRMWgrVjNu-rwgqxAKlFJkN9ekhWDpq24bMRr8ibnDWOsU0ysyN3pzodIDXpLf98__nr6-XBDfbAeTXGZbg1-p3Gg01uOJY6ODslg8TGY-aB2n3xY0xz9lsa0NsEjDb6kuHaT6DDuxpj9bH1LXg1mm9275_uIfD3_fHt2WV1_ubg6O72ukEtxqIYaW2WNlKyW0BuBTFijZA9oe64aUH0N1radnf7bG-g6VEYpwA5BTRoXR-R46Y25eJ3RF4d3GENwWDTUqm6bZjJ9XExjij_2Lhe9ifsUpr00Z4zLtlPdXAWLC1PMOblBj8nvTDpoYHqmrhfqeqKuZ-r6MGX4ksnjTMalf83_C31YQptcYvo7pW4VZ0Jx8QefL5H7</recordid><startdate>20180301</startdate><enddate>20180301</enddate><creator>Philben, Michael</creator><creator>Billings, Sharon A.</creator><creator>Edwards, Kate A.</creator><creator>Podrebarac, Frances A.</creator><creator>van Biesen, Geert</creator><creator>Ziegler, Susan E.</creator><general>Springer Science + Business Media</general><general>Springer International Publishing</general><general>Springer Nature B.V</general><general>Springer</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7SN</scope><scope>7ST</scope><scope>7T7</scope><scope>7UA</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H96</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>L.G</scope><scope>LK8</scope><scope>M0S</scope><scope>M2P</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PCBAR</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>Q9U</scope><scope>SOI</scope><scope>OIOZB</scope><scope>OTOTI</scope><orcidid>https://orcid.org/0000-0002-8598-9043</orcidid><orcidid>https://orcid.org/0000000285989043</orcidid></search><sort><creationdate>20180301</creationdate><title>Amino acid δ¹⁵N indicates lack of N isotope fractionation during soil organic nitrogen decomposition</title><author>Philben, Michael ; Billings, Sharon A. ; Edwards, Kate A. ; Podrebarac, Frances A. ; van Biesen, Geert ; Ziegler, Susan E.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c253y-f4c87da550451ba3c03da75b1cdb27617b41dd89d105ba199c7a771c9c177b423</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Acidic soils</topic><topic>Amino acid sequence</topic><topic>Amino acid stable isotopes</topic><topic>Amino acids</topic><topic>Ammonification</topic><topic>BASIC BIOLOGICAL SCIENCES</topic><topic>Biogeosciences</topic><topic>Boreal ecosystems</topic><topic>Decomposition</topic><topic>Depolymerization</topic><topic>Depth</topic><topic>Earth and Environmental Science</topic><topic>Earth Sciences</topic><topic>Ecosystems</topic><topic>Environmental Chemistry</topic><topic>Fractionation</topic><topic>Hydroxyproline</topic><topic>Incubation period</topic><topic>Isotope fractionation</topic><topic>Isotopes</topic><topic>Laboratories</topic><topic>Leaching</topic><topic>Life Sciences</topic><topic>Mineralization</topic><topic>Nitrogen</topic><topic>Nitrogen isotope fractionation</topic><topic>Nitrogen isotopes</topic><topic>Organic nitrogen</topic><topic>Organic soils</topic><topic>ORIGINAL PAPERS</topic><topic>Peptides</topic><topic>Phenylalanine</topic><topic>Podzolic soils</topic><topic>Profiles</topic><topic>Soil</topic><topic>Soil depth</topic><topic>Soil microorganisms</topic><topic>Soil organic nitrogen</topic><topic>Soil profiles</topic><topic>Soil properties</topic><topic>Soils</topic><topic>Uptake</topic><topic>δ15N</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Philben, Michael</creatorcontrib><creatorcontrib>Billings, Sharon A.</creatorcontrib><creatorcontrib>Edwards, Kate A.</creatorcontrib><creatorcontrib>Podrebarac, Frances A.</creatorcontrib><creatorcontrib>van Biesen, Geert</creatorcontrib><creatorcontrib>Ziegler, Susan E.</creatorcontrib><creatorcontrib>Oak Ridge National Lab. 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(ORNL), Oak Ridge, TN (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Amino acid δ¹⁵N indicates lack of N isotope fractionation during soil organic nitrogen decomposition</atitle><jtitle>Biogeochemistry</jtitle><stitle>Biogeochemistry</stitle><date>2018-03-01</date><risdate>2018</risdate><volume>138</volume><issue>1</issue><spage>69</spage><epage>83</epage><pages>69-83</pages><issn>0168-2563</issn><eissn>1573-515X</eissn><abstract>The interpretation of natural abundance δ¹⁵N in soil profiles and across ecosystems is confounded by a lack of understanding of possible N isotope fractionation associated with soil organic nitrogen (SON) decomposition. We analyzed the δ¹⁵N of hydrolysable amino acids to test the extent of fractionation associated with the depolymerization of peptides to amino acids and the mineralization of amino acids to NH₄⁺ (ammonification). Most amino acids are both synthesized and degraded by microbes, complicating interpretation of their δ¹⁵N. However, the “source” amino acids phenylalanine and hydroxyproline are degraded and recycled but not resynthesized. We therefore used their δ¹⁵N to isolate the effects of N isotope fractionation during SON depolymerization and ammonification. We used complementary field and laboratory approaches to evaluate the change in amino acid δ¹⁵N during decomposition. First, we measured amino acid δ¹⁵N changes with depth in the organic horizons of podzolic soils collected from the Newfoundland and Labrador Boreal Ecosystem Latitudinal Transect (NL-BELT), Canada. The δ¹⁵N of most amino acids increased with depth by 3–7‰, similar to the increase in bulk δ¹⁵N. However, the δ¹⁵N of the “source” amino acids did not change with depth, indicating lack of N isotope fractionation during their depolymerization and ammonification. Second, we assessed the change in amino acid δ¹⁵N following 400 days of laboratory incubation. This approach isolated the effect of decomposition on δ¹⁵N by eliminating plant N uptake and reducing leaching of N from the soil. Amino acid δ¹⁵N did not change during incubation despite extensive turnover of the amino acid pool, supporting our conclusion of a lack of N isotope fractionation during SON decomposition. Our results indicate the often-observed trend of increasing δ¹⁵N with soil depth likely results from the mycorrhizally-mediated transfer of ¹⁴N from depth to the surface and accumulation of ¹⁵N-enriched necromass of diverse soil microbes at depth, rather than as a direct result of SON decomposition.</abstract><cop>Cham</cop><pub>Springer Science + Business Media</pub><doi>10.1007/s10533-018-0429-y</doi><tpages>15</tpages><orcidid>https://orcid.org/0000-0002-8598-9043</orcidid><orcidid>https://orcid.org/0000000285989043</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Acidic soils Amino acid sequence Amino acid stable isotopes Amino acids Ammonification BASIC BIOLOGICAL SCIENCES Biogeosciences Boreal ecosystems Decomposition Depolymerization Depth Earth and Environmental Science Earth Sciences Ecosystems Environmental Chemistry Fractionation Hydroxyproline Incubation period Isotope fractionation Isotopes Laboratories Leaching Life Sciences Mineralization Nitrogen Nitrogen isotope fractionation Nitrogen isotopes Organic nitrogen Organic soils ORIGINAL PAPERS Peptides Phenylalanine Podzolic soils Profiles Soil Soil depth Soil microorganisms Soil organic nitrogen Soil profiles Soil properties Soils Uptake δ15N |
title | Amino acid δ¹⁵N indicates lack of N isotope fractionation during soil organic nitrogen decomposition |
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