Representing leaf and root physiological traits in CLM improves global carbon and nitrogen cycling predictions
In many ecosystems, nitrogen is the most limiting nutrient for plant growth and productivity. However, current Earth System Models (ESMs) do not mechanistically represent functional nitrogen allocation for photosynthesis or the linkage between nitrogen uptake and root traits. The current version of...
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Veröffentlicht in: | Journal of advances in modeling earth systems 2016-06, Vol.8 (2), p.598-613 |
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description | In many ecosystems, nitrogen is the most limiting nutrient for plant growth and productivity. However, current Earth System Models (ESMs) do not mechanistically represent functional nitrogen allocation for photosynthesis or the linkage between nitrogen uptake and root traits. The current version of CLM (4.5) links nitrogen availability and plant productivity via (1) an instantaneous downregulation of potential photosynthesis rates based on soil mineral nitrogen availability, and (2) apportionment of soil nitrogen between plants and competing nitrogen consumers assumed to be proportional to their relative N demands. However, plants do not photosynthesize at potential rates and then downregulate; instead photosynthesis rates are governed by nitrogen that has been allocated to the physiological processes underpinning photosynthesis. Furthermore, the role of plant roots in nutrient acquisition has also been largely ignored in ESMs. We therefore present a new plant nitrogen model for CLM4.5 with (1) improved representations of linkages between leaf nitrogen and plant productivity based on observed relationships in a global plant trait database and (2) plant nitrogen uptake based on root‐scale Michaelis‐Menten uptake kinetics. Our model improvements led to a global bias reduction in GPP, LAI, and biomass of 70%, 11%, and 49%, respectively. Furthermore, water use efficiency predictions were improved conceptually, qualitatively, and in magnitude. The new model's GPP responses to nitrogen deposition, CO2 fertilization, and climate also differed from the baseline model. The mechanistic representation of leaf‐level nitrogen allocation and a theoretically consistent treatment of competition with belowground consumers led to overall improvements in global carbon cycling predictions.
Key Points:
Improved representation of root and leaf physiological traits in Community Land Model
Model changes led to an overall improvement in global carbon cycling predictions
Model improved with mechanistic leaf‐level nitrogen allocation and root nitrogen uptake kinetics |
doi_str_mv | 10.1002/2015MS000538 |
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Key Points:
Improved representation of root and leaf physiological traits in Community Land Model
Model changes led to an overall improvement in global carbon cycling predictions
Model improved with mechanistic leaf‐level nitrogen allocation and root nitrogen uptake kinetics</description><identifier>ISSN: 1942-2466</identifier><identifier>EISSN: 1942-2466</identifier><identifier>DOI: 10.1002/2015MS000538</identifier><language>eng</language><publisher>Washington: John Wiley & Sons, Inc</publisher><subject>Acquisition ; Availability ; Biological fertilization ; Biomass ; Carbon ; Carbon cycle ; Carbon dioxide ; Climate change ; CLM ; Competition ; Consumers ; Earth ; Ecosystems ; Efficiency ; ENVIRONMENTAL SCIENCES ; GPP ; Kinetics ; leaf traits ; Limiting factors ; Nitrogen ; Nitrogen cycle ; Nitrogen deposition ; Nutrient cycles ; Nutrients ; Photosynthesis ; Physiology ; Plant growth ; Productivity ; Respiration ; root traits ; Soil ; Uptake ; Water use ; Water use efficiency</subject><ispartof>Journal of advances in modeling earth systems, 2016-06, Vol.8 (2), p.598-613</ispartof><rights>2016. The Authors.</rights><rights>2016. This work is published under http://creativecommons.org/licenses/by-nc-nd/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4758-3577e167d9a1e942f4788caa31ae23747bf8e6f17518c554a1db1c6a872237f13</citedby><cites>FETCH-LOGICAL-c4758-3577e167d9a1e942f4788caa31ae23747bf8e6f17518c554a1db1c6a872237f13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2F2015MS000538$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2F2015MS000538$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>230,314,780,784,864,885,1416,11561,27923,27924,45573,45574,46051,46475</link.rule.ids><backlink>$$Uhttps://www.osti.gov/servlets/purl/1379371$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Ghimire, Bardan</creatorcontrib><creatorcontrib>Riley, William J.</creatorcontrib><creatorcontrib>Koven, Charles D.</creatorcontrib><creatorcontrib>Mu, Mingquan</creatorcontrib><creatorcontrib>Randerson, James T.</creatorcontrib><creatorcontrib>Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)</creatorcontrib><title>Representing leaf and root physiological traits in CLM improves global carbon and nitrogen cycling predictions</title><title>Journal of advances in modeling earth systems</title><description>In many ecosystems, nitrogen is the most limiting nutrient for plant growth and productivity. However, current Earth System Models (ESMs) do not mechanistically represent functional nitrogen allocation for photosynthesis or the linkage between nitrogen uptake and root traits. The current version of CLM (4.5) links nitrogen availability and plant productivity via (1) an instantaneous downregulation of potential photosynthesis rates based on soil mineral nitrogen availability, and (2) apportionment of soil nitrogen between plants and competing nitrogen consumers assumed to be proportional to their relative N demands. However, plants do not photosynthesize at potential rates and then downregulate; instead photosynthesis rates are governed by nitrogen that has been allocated to the physiological processes underpinning photosynthesis. Furthermore, the role of plant roots in nutrient acquisition has also been largely ignored in ESMs. We therefore present a new plant nitrogen model for CLM4.5 with (1) improved representations of linkages between leaf nitrogen and plant productivity based on observed relationships in a global plant trait database and (2) plant nitrogen uptake based on root‐scale Michaelis‐Menten uptake kinetics. Our model improvements led to a global bias reduction in GPP, LAI, and biomass of 70%, 11%, and 49%, respectively. Furthermore, water use efficiency predictions were improved conceptually, qualitatively, and in magnitude. The new model's GPP responses to nitrogen deposition, CO2 fertilization, and climate also differed from the baseline model. The mechanistic representation of leaf‐level nitrogen allocation and a theoretically consistent treatment of competition with belowground consumers led to overall improvements in global carbon cycling predictions.
Key Points:
Improved representation of root and leaf physiological traits in Community Land Model
Model changes led to an overall improvement in global carbon cycling predictions
Model improved with mechanistic leaf‐level nitrogen allocation and root nitrogen uptake kinetics</description><subject>Acquisition</subject><subject>Availability</subject><subject>Biological fertilization</subject><subject>Biomass</subject><subject>Carbon</subject><subject>Carbon cycle</subject><subject>Carbon dioxide</subject><subject>Climate change</subject><subject>CLM</subject><subject>Competition</subject><subject>Consumers</subject><subject>Earth</subject><subject>Ecosystems</subject><subject>Efficiency</subject><subject>ENVIRONMENTAL SCIENCES</subject><subject>GPP</subject><subject>Kinetics</subject><subject>leaf traits</subject><subject>Limiting factors</subject><subject>Nitrogen</subject><subject>Nitrogen cycle</subject><subject>Nitrogen deposition</subject><subject>Nutrient cycles</subject><subject>Nutrients</subject><subject>Photosynthesis</subject><subject>Physiology</subject><subject>Plant growth</subject><subject>Productivity</subject><subject>Respiration</subject><subject>root traits</subject><subject>Soil</subject><subject>Uptake</subject><subject>Water use</subject><subject>Water use efficiency</subject><issn>1942-2466</issn><issn>1942-2466</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><recordid>eNp90UlPQyEQB_AXo4nrzQ9A9OLBKstj6dE0dUsbE5czoXRexVCoQDX99lLrwXjwBMn8-DOTaZpjgi8IxvSSYsLHTxhjztRWs0f6Le3RVojtX_fdZj_nN4yFEJTvNeERFgkyhOLCDHkwHTJhilKMBS1eV9lFH2fOGo9KMq5k5AIajMbIzRcpfkBGMx8ntWpNmsTw_Ta4kuIMArIr69ep9YOps8XFkA-bnc74DEc_50Hzcj18Htz2Rg83d4OrUc-2kqse41ICEXLaNwRq510rlbLGMGKAMtnKSadAdERyoiznrSHTCbHCKElruSPsoDnZ5MZcnM7WFbCvNoYAtmjCZJ_JNTrboDrK-xJy0XOXLXhvAsRl1kRhJUlbbaWnf-hbXKZQR9CU9jFlnLXrwPONsinmnKDTi-TmJq00wXq9If17Q5WzDf90Hlb_Wn1_NR5STIViX0-ukUo</recordid><startdate>201606</startdate><enddate>201606</enddate><creator>Ghimire, Bardan</creator><creator>Riley, William J.</creator><creator>Koven, Charles D.</creator><creator>Mu, Mingquan</creator><creator>Randerson, James T.</creator><general>John Wiley & Sons, Inc</general><general>American Geophysical Union (AGU)</general><scope>24P</scope><scope>WIN</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TG</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>H96</scope><scope>HCIFZ</scope><scope>KL.</scope><scope>L.G</scope><scope>PCBAR</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>OIOZB</scope><scope>OTOTI</scope></search><sort><creationdate>201606</creationdate><title>Representing leaf and root physiological traits in CLM improves global carbon and nitrogen cycling predictions</title><author>Ghimire, Bardan ; Riley, William J. ; Koven, Charles D. ; Mu, Mingquan ; Randerson, James T.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4758-3577e167d9a1e942f4788caa31ae23747bf8e6f17518c554a1db1c6a872237f13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Acquisition</topic><topic>Availability</topic><topic>Biological fertilization</topic><topic>Biomass</topic><topic>Carbon</topic><topic>Carbon cycle</topic><topic>Carbon dioxide</topic><topic>Climate change</topic><topic>CLM</topic><topic>Competition</topic><topic>Consumers</topic><topic>Earth</topic><topic>Ecosystems</topic><topic>Efficiency</topic><topic>ENVIRONMENTAL SCIENCES</topic><topic>GPP</topic><topic>Kinetics</topic><topic>leaf traits</topic><topic>Limiting factors</topic><topic>Nitrogen</topic><topic>Nitrogen cycle</topic><topic>Nitrogen deposition</topic><topic>Nutrient cycles</topic><topic>Nutrients</topic><topic>Photosynthesis</topic><topic>Physiology</topic><topic>Plant growth</topic><topic>Productivity</topic><topic>Respiration</topic><topic>root traits</topic><topic>Soil</topic><topic>Uptake</topic><topic>Water use</topic><topic>Water use efficiency</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ghimire, Bardan</creatorcontrib><creatorcontrib>Riley, William J.</creatorcontrib><creatorcontrib>Koven, Charles D.</creatorcontrib><creatorcontrib>Mu, Mingquan</creatorcontrib><creatorcontrib>Randerson, James T.</creatorcontrib><creatorcontrib>Lawrence Berkeley National Lab. 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(LBNL), Berkeley, CA (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Representing leaf and root physiological traits in CLM improves global carbon and nitrogen cycling predictions</atitle><jtitle>Journal of advances in modeling earth systems</jtitle><date>2016-06</date><risdate>2016</risdate><volume>8</volume><issue>2</issue><spage>598</spage><epage>613</epage><pages>598-613</pages><issn>1942-2466</issn><eissn>1942-2466</eissn><abstract>In many ecosystems, nitrogen is the most limiting nutrient for plant growth and productivity. However, current Earth System Models (ESMs) do not mechanistically represent functional nitrogen allocation for photosynthesis or the linkage between nitrogen uptake and root traits. The current version of CLM (4.5) links nitrogen availability and plant productivity via (1) an instantaneous downregulation of potential photosynthesis rates based on soil mineral nitrogen availability, and (2) apportionment of soil nitrogen between plants and competing nitrogen consumers assumed to be proportional to their relative N demands. However, plants do not photosynthesize at potential rates and then downregulate; instead photosynthesis rates are governed by nitrogen that has been allocated to the physiological processes underpinning photosynthesis. Furthermore, the role of plant roots in nutrient acquisition has also been largely ignored in ESMs. We therefore present a new plant nitrogen model for CLM4.5 with (1) improved representations of linkages between leaf nitrogen and plant productivity based on observed relationships in a global plant trait database and (2) plant nitrogen uptake based on root‐scale Michaelis‐Menten uptake kinetics. Our model improvements led to a global bias reduction in GPP, LAI, and biomass of 70%, 11%, and 49%, respectively. Furthermore, water use efficiency predictions were improved conceptually, qualitatively, and in magnitude. The new model's GPP responses to nitrogen deposition, CO2 fertilization, and climate also differed from the baseline model. The mechanistic representation of leaf‐level nitrogen allocation and a theoretically consistent treatment of competition with belowground consumers led to overall improvements in global carbon cycling predictions.
Key Points:
Improved representation of root and leaf physiological traits in Community Land Model
Model changes led to an overall improvement in global carbon cycling predictions
Model improved with mechanistic leaf‐level nitrogen allocation and root nitrogen uptake kinetics</abstract><cop>Washington</cop><pub>John Wiley & Sons, Inc</pub><doi>10.1002/2015MS000538</doi><tpages>16</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Acquisition Availability Biological fertilization Biomass Carbon Carbon cycle Carbon dioxide Climate change CLM Competition Consumers Earth Ecosystems Efficiency ENVIRONMENTAL SCIENCES GPP Kinetics leaf traits Limiting factors Nitrogen Nitrogen cycle Nitrogen deposition Nutrient cycles Nutrients Photosynthesis Physiology Plant growth Productivity Respiration root traits Soil Uptake Water use Water use efficiency |
title | Representing leaf and root physiological traits in CLM improves global carbon and nitrogen cycling predictions |
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