Prenatal Particulate Air Pollution and DNA Methylation in Newborns: An Epigenome-Wide Meta-Analysis

BACKGROUND: Prenatal exposure to air pollution has been associated with childhood respiratory disease and other adverse outcomes. Epigenetics is a suggested link between exposures and health outcomes. OBJECTIVES: We aimed to investigate associations between prenatal exposure to particulate matter (P...

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Veröffentlicht in:ENVIRONMENTAL HEALTH PERSPECTIVES 2019-05, Vol.127 (5)
Hauptverfasser: Gruzieva, Olena, Xu, Cheng-Jian, Yousefi, Paul, Relton, Caroline, Merid, Simon Kebede, Breton, Carrie V, Gao, Lu, Volk, Heather E, Feinberg, Jason I, Ladd-Acosta, Christine, Bakulski, Kelly, Auffray, Charles, Lemonnier, Nathanael, Plusquin, Michelle, Ghantous, Akram, Herceg, Zdenko, Nawrot, Tim S, Pizzi, Costanza, Richiardi, Lorenzo, Rusconi, Franca, Vineis, Paolo, Kogevinas, Manolis, Felix, Janine F, Duijts, Liesbeth, den Dekker, Herman T, Jaddoe, Vincent W.V, Ruiz, Jose L, Bustamante, Mariona, Anto, Josep Maria, Sunyer, Jordi, Vrijheid, Martine, Gutzkow, Kristine B, Grazuleviciene, Regina, Hernandez-Ferrer, Carles, Annesi-Maesano, Isabella, Lepeule, Johanna, Bousquet, Jean, Bergstrom, Anna, Kull, Inger, Soderhall, Cilla, Kere, Juha, Gehring, Ulrike, Brunekreef, Bert, Just, Allan C, Wright, Rosalind J, Peng, Cheng, Gold, Diane R, Kloog, Itai, DeMeo, Dawn L, Pershagen, Goran, Koppelman, Gerard H, London, Stephanie J, Baccarelli, Andrea A, Melen, Erik
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creator Gruzieva, Olena
Xu, Cheng-Jian
Yousefi, Paul
Relton, Caroline
Merid, Simon Kebede
Breton, Carrie V
Gao, Lu
Volk, Heather E
Feinberg, Jason I
Ladd-Acosta, Christine
Bakulski, Kelly
Auffray, Charles
Lemonnier, Nathanael
Plusquin, Michelle
Ghantous, Akram
Herceg, Zdenko
Nawrot, Tim S
Pizzi, Costanza
Richiardi, Lorenzo
Rusconi, Franca
Vineis, Paolo
Kogevinas, Manolis
Felix, Janine F
Duijts, Liesbeth
den Dekker, Herman T
Jaddoe, Vincent W.V
Ruiz, Jose L
Bustamante, Mariona
Anto, Josep Maria
Sunyer, Jordi
Vrijheid, Martine
Gutzkow, Kristine B
Grazuleviciene, Regina
Hernandez-Ferrer, Carles
Annesi-Maesano, Isabella
Lepeule, Johanna
Bousquet, Jean
Bergstrom, Anna
Kull, Inger
Soderhall, Cilla
Kere, Juha
Gehring, Ulrike
Brunekreef, Bert
Just, Allan C
Wright, Rosalind J
Peng, Cheng
Gold, Diane R
Kloog, Itai
DeMeo, Dawn L
Pershagen, Goran
Koppelman, Gerard H
London, Stephanie J
Baccarelli, Andrea A
Melen, Erik
description BACKGROUND: Prenatal exposure to air pollution has been associated with childhood respiratory disease and other adverse outcomes. Epigenetics is a suggested link between exposures and health outcomes. OBJECTIVES: We aimed to investigate associations between prenatal exposure to particulate matter (PM) with diameter [Formula: see text] ([Formula: see text]) or [Formula: see text] ([Formula: see text]) and DNA methylation in newborns and children. METHODS: We meta-analyzed associations between exposure to [Formula: see text] ([Formula: see text]) and [Formula: see text] ([Formula: see text]) at maternal home addresses during pregnancy and newborn DNA methylation assessed by Illumina Infinium HumanMethylation450K BeadChip in nine European and American studies, with replication in 688 independent newborns and look-up analyses in 2,118 older children. We used two approaches, one focusing on single cytosine-phosphate-guanine (CpG) sites and another on differentially methylated regions (DMRs). We also related PM exposures to blood mRNA expression. RESULTS: Six CpGs were significantly associated [false discovery rate (FDR) [Formula: see text]] with prenatal [Formula: see text] and 14 with [Formula: see text] exposure. Two of the [Formula: see text] CpGs mapped to FAM13A (cg00905156) and NOTCH4 (cg06849931) previously associated with lung function and asthma. Although these associations did not replicate in the smaller newborn sample, both CpGs were significant ([Formula: see text]) in 7- to 9-y-olds. For cg06849931, however, the direction of the association was inconsistent. Concurrent [Formula: see text] exposure was associated with a significantly higher NOTCH4 expression at age 16 y. We also identified several DMRs associated with either prenatal [Formula: see text] and or [Formula: see text] exposure, of which two [Formula: see text] DMRs, including H19 and MARCH11, replicated in newborns. CONCLUSIONS: Several differentially methylated CpGs and DMRs associated with prenatal PM exposure were identified in newborns, with annotation to genes previously implicated in lung-related outcomes. https://doi.org/10.1289/EHP4522.
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Epigenetics is a suggested link between exposures and health outcomes. OBJECTIVES: We aimed to investigate associations between prenatal exposure to particulate matter (PM) with diameter [Formula: see text] ([Formula: see text]) or [Formula: see text] ([Formula: see text]) and DNA methylation in newborns and children. METHODS: We meta-analyzed associations between exposure to [Formula: see text] ([Formula: see text]) and [Formula: see text] ([Formula: see text]) at maternal home addresses during pregnancy and newborn DNA methylation assessed by Illumina Infinium HumanMethylation450K BeadChip in nine European and American studies, with replication in 688 independent newborns and look-up analyses in 2,118 older children. We used two approaches, one focusing on single cytosine-phosphate-guanine (CpG) sites and another on differentially methylated regions (DMRs). We also related PM exposures to blood mRNA expression. RESULTS: Six CpGs were significantly associated [false discovery rate (FDR) [Formula: see text]] with prenatal [Formula: see text] and 14 with [Formula: see text] exposure. Two of the [Formula: see text] CpGs mapped to FAM13A (cg00905156) and NOTCH4 (cg06849931) previously associated with lung function and asthma. Although these associations did not replicate in the smaller newborn sample, both CpGs were significant ([Formula: see text]) in 7- to 9-y-olds. For cg06849931, however, the direction of the association was inconsistent. Concurrent [Formula: see text] exposure was associated with a significantly higher NOTCH4 expression at age 16 y. We also identified several DMRs associated with either prenatal [Formula: see text] and or [Formula: see text] exposure, of which two [Formula: see text] DMRs, including H19 and MARCH11, replicated in newborns. CONCLUSIONS: Several differentially methylated CpGs and DMRs associated with prenatal PM exposure were identified in newborns, with annotation to genes previously implicated in lung-related outcomes. https://doi.org/10.1289/EHP4522.</description><identifier>ISSN: 0091-6765</identifier><language>eng</language><publisher>US DEPT HEALTH HUMAN SCIENCES PUBLIC HEALTH SCIENCE</publisher><ispartof>ENVIRONMENTAL HEALTH PERSPECTIVES, 2019-05, Vol.127 (5)</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,315,780,784,27860</link.rule.ids></links><search><creatorcontrib>Gruzieva, Olena</creatorcontrib><creatorcontrib>Xu, Cheng-Jian</creatorcontrib><creatorcontrib>Yousefi, Paul</creatorcontrib><creatorcontrib>Relton, Caroline</creatorcontrib><creatorcontrib>Merid, Simon Kebede</creatorcontrib><creatorcontrib>Breton, Carrie V</creatorcontrib><creatorcontrib>Gao, Lu</creatorcontrib><creatorcontrib>Volk, Heather E</creatorcontrib><creatorcontrib>Feinberg, Jason I</creatorcontrib><creatorcontrib>Ladd-Acosta, Christine</creatorcontrib><creatorcontrib>Bakulski, Kelly</creatorcontrib><creatorcontrib>Auffray, Charles</creatorcontrib><creatorcontrib>Lemonnier, Nathanael</creatorcontrib><creatorcontrib>Plusquin, Michelle</creatorcontrib><creatorcontrib>Ghantous, Akram</creatorcontrib><creatorcontrib>Herceg, Zdenko</creatorcontrib><creatorcontrib>Nawrot, Tim S</creatorcontrib><creatorcontrib>Pizzi, Costanza</creatorcontrib><creatorcontrib>Richiardi, Lorenzo</creatorcontrib><creatorcontrib>Rusconi, Franca</creatorcontrib><creatorcontrib>Vineis, Paolo</creatorcontrib><creatorcontrib>Kogevinas, Manolis</creatorcontrib><creatorcontrib>Felix, Janine F</creatorcontrib><creatorcontrib>Duijts, Liesbeth</creatorcontrib><creatorcontrib>den Dekker, Herman T</creatorcontrib><creatorcontrib>Jaddoe, Vincent W.V</creatorcontrib><creatorcontrib>Ruiz, Jose L</creatorcontrib><creatorcontrib>Bustamante, Mariona</creatorcontrib><creatorcontrib>Anto, Josep Maria</creatorcontrib><creatorcontrib>Sunyer, Jordi</creatorcontrib><creatorcontrib>Vrijheid, Martine</creatorcontrib><creatorcontrib>Gutzkow, Kristine B</creatorcontrib><creatorcontrib>Grazuleviciene, Regina</creatorcontrib><creatorcontrib>Hernandez-Ferrer, Carles</creatorcontrib><creatorcontrib>Annesi-Maesano, Isabella</creatorcontrib><creatorcontrib>Lepeule, Johanna</creatorcontrib><creatorcontrib>Bousquet, Jean</creatorcontrib><creatorcontrib>Bergstrom, Anna</creatorcontrib><creatorcontrib>Kull, Inger</creatorcontrib><creatorcontrib>Soderhall, Cilla</creatorcontrib><creatorcontrib>Kere, Juha</creatorcontrib><creatorcontrib>Gehring, Ulrike</creatorcontrib><creatorcontrib>Brunekreef, Bert</creatorcontrib><creatorcontrib>Just, Allan C</creatorcontrib><creatorcontrib>Wright, Rosalind J</creatorcontrib><creatorcontrib>Peng, Cheng</creatorcontrib><creatorcontrib>Gold, Diane R</creatorcontrib><creatorcontrib>Kloog, Itai</creatorcontrib><creatorcontrib>DeMeo, Dawn L</creatorcontrib><creatorcontrib>Pershagen, Goran</creatorcontrib><creatorcontrib>Koppelman, Gerard H</creatorcontrib><creatorcontrib>London, Stephanie J</creatorcontrib><creatorcontrib>Baccarelli, Andrea A</creatorcontrib><creatorcontrib>Melen, Erik</creatorcontrib><title>Prenatal Particulate Air Pollution and DNA Methylation in Newborns: An Epigenome-Wide Meta-Analysis</title><title>ENVIRONMENTAL HEALTH PERSPECTIVES</title><description>BACKGROUND: Prenatal exposure to air pollution has been associated with childhood respiratory disease and other adverse outcomes. Epigenetics is a suggested link between exposures and health outcomes. OBJECTIVES: We aimed to investigate associations between prenatal exposure to particulate matter (PM) with diameter [Formula: see text] ([Formula: see text]) or [Formula: see text] ([Formula: see text]) and DNA methylation in newborns and children. METHODS: We meta-analyzed associations between exposure to [Formula: see text] ([Formula: see text]) and [Formula: see text] ([Formula: see text]) at maternal home addresses during pregnancy and newborn DNA methylation assessed by Illumina Infinium HumanMethylation450K BeadChip in nine European and American studies, with replication in 688 independent newborns and look-up analyses in 2,118 older children. We used two approaches, one focusing on single cytosine-phosphate-guanine (CpG) sites and another on differentially methylated regions (DMRs). We also related PM exposures to blood mRNA expression. RESULTS: Six CpGs were significantly associated [false discovery rate (FDR) [Formula: see text]] with prenatal [Formula: see text] and 14 with [Formula: see text] exposure. Two of the [Formula: see text] CpGs mapped to FAM13A (cg00905156) and NOTCH4 (cg06849931) previously associated with lung function and asthma. Although these associations did not replicate in the smaller newborn sample, both CpGs were significant ([Formula: see text]) in 7- to 9-y-olds. For cg06849931, however, the direction of the association was inconsistent. Concurrent [Formula: see text] exposure was associated with a significantly higher NOTCH4 expression at age 16 y. We also identified several DMRs associated with either prenatal [Formula: see text] and or [Formula: see text] exposure, of which two [Formula: see text] DMRs, including H19 and MARCH11, replicated in newborns. CONCLUSIONS: Several differentially methylated CpGs and DMRs associated with prenatal PM exposure were identified in newborns, with annotation to genes previously implicated in lung-related outcomes. https://doi.org/10.1289/EHP4522.</description><issn>0091-6765</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>FZOIL</sourceid><recordid>eNqVysFugkAUheFZ1KTU9h3u2oRmgDKIO2I1bkpYmLic3MJtOzq9EGao-vaWxAfQ1Un-8z2IQMo8ClWm0kfx5NxeShnNlQpEXfXE6NFChb039WDRExSmh6q1dvCmZUBu4L0s4IP8z_n_H5thKOn42fbsFlAwrDrzTdz-UrgzDY0Uw4LRnp1xz2LyhdbRy3WnYrZebZeb8DBYGv6IdeM6rEnHUqdS6ijO32Kt8jjLkuRO_Hoz1v7kkwuPSlXI</recordid><startdate>20190501</startdate><enddate>20190501</enddate><creator>Gruzieva, Olena</creator><creator>Xu, Cheng-Jian</creator><creator>Yousefi, Paul</creator><creator>Relton, Caroline</creator><creator>Merid, Simon Kebede</creator><creator>Breton, Carrie V</creator><creator>Gao, Lu</creator><creator>Volk, Heather E</creator><creator>Feinberg, Jason I</creator><creator>Ladd-Acosta, Christine</creator><creator>Bakulski, Kelly</creator><creator>Auffray, Charles</creator><creator>Lemonnier, Nathanael</creator><creator>Plusquin, Michelle</creator><creator>Ghantous, Akram</creator><creator>Herceg, Zdenko</creator><creator>Nawrot, Tim S</creator><creator>Pizzi, Costanza</creator><creator>Richiardi, Lorenzo</creator><creator>Rusconi, Franca</creator><creator>Vineis, Paolo</creator><creator>Kogevinas, Manolis</creator><creator>Felix, Janine F</creator><creator>Duijts, Liesbeth</creator><creator>den Dekker, Herman T</creator><creator>Jaddoe, Vincent W.V</creator><creator>Ruiz, Jose L</creator><creator>Bustamante, Mariona</creator><creator>Anto, Josep Maria</creator><creator>Sunyer, Jordi</creator><creator>Vrijheid, Martine</creator><creator>Gutzkow, Kristine B</creator><creator>Grazuleviciene, Regina</creator><creator>Hernandez-Ferrer, Carles</creator><creator>Annesi-Maesano, 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Simon Kebede ; Breton, Carrie V ; Gao, Lu ; Volk, Heather E ; Feinberg, Jason I ; Ladd-Acosta, Christine ; Bakulski, Kelly ; Auffray, Charles ; Lemonnier, Nathanael ; Plusquin, Michelle ; Ghantous, Akram ; Herceg, Zdenko ; Nawrot, Tim S ; Pizzi, Costanza ; Richiardi, Lorenzo ; Rusconi, Franca ; Vineis, Paolo ; Kogevinas, Manolis ; Felix, Janine F ; Duijts, Liesbeth ; den Dekker, Herman T ; Jaddoe, Vincent W.V ; Ruiz, Jose L ; Bustamante, Mariona ; Anto, Josep Maria ; Sunyer, Jordi ; Vrijheid, Martine ; Gutzkow, Kristine B ; Grazuleviciene, Regina ; Hernandez-Ferrer, Carles ; Annesi-Maesano, Isabella ; Lepeule, Johanna ; Bousquet, Jean ; Bergstrom, Anna ; Kull, Inger ; Soderhall, Cilla ; Kere, Juha ; Gehring, Ulrike ; Brunekreef, Bert ; Just, Allan C ; Wright, Rosalind J ; Peng, Cheng ; Gold, Diane R ; Kloog, Itai ; DeMeo, Dawn L ; Pershagen, Goran ; Koppelman, Gerard H ; London, Stephanie J ; Baccarelli, Andrea A ; Melen, 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Martine</au><au>Gutzkow, Kristine B</au><au>Grazuleviciene, Regina</au><au>Hernandez-Ferrer, Carles</au><au>Annesi-Maesano, Isabella</au><au>Lepeule, Johanna</au><au>Bousquet, Jean</au><au>Bergstrom, Anna</au><au>Kull, Inger</au><au>Soderhall, Cilla</au><au>Kere, Juha</au><au>Gehring, Ulrike</au><au>Brunekreef, Bert</au><au>Just, Allan C</au><au>Wright, Rosalind J</au><au>Peng, Cheng</au><au>Gold, Diane R</au><au>Kloog, Itai</au><au>DeMeo, Dawn L</au><au>Pershagen, Goran</au><au>Koppelman, Gerard H</au><au>London, Stephanie J</au><au>Baccarelli, Andrea A</au><au>Melen, Erik</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Prenatal Particulate Air Pollution and DNA Methylation in Newborns: An Epigenome-Wide Meta-Analysis</atitle><jtitle>ENVIRONMENTAL HEALTH PERSPECTIVES</jtitle><date>2019-05-01</date><risdate>2019</risdate><volume>127</volume><issue>5</issue><issn>0091-6765</issn><abstract>BACKGROUND: Prenatal exposure to air pollution has been associated with childhood respiratory disease and other adverse outcomes. Epigenetics is a suggested link between exposures and health outcomes. OBJECTIVES: We aimed to investigate associations between prenatal exposure to particulate matter (PM) with diameter [Formula: see text] ([Formula: see text]) or [Formula: see text] ([Formula: see text]) and DNA methylation in newborns and children. METHODS: We meta-analyzed associations between exposure to [Formula: see text] ([Formula: see text]) and [Formula: see text] ([Formula: see text]) at maternal home addresses during pregnancy and newborn DNA methylation assessed by Illumina Infinium HumanMethylation450K BeadChip in nine European and American studies, with replication in 688 independent newborns and look-up analyses in 2,118 older children. We used two approaches, one focusing on single cytosine-phosphate-guanine (CpG) sites and another on differentially methylated regions (DMRs). We also related PM exposures to blood mRNA expression. RESULTS: Six CpGs were significantly associated [false discovery rate (FDR) [Formula: see text]] with prenatal [Formula: see text] and 14 with [Formula: see text] exposure. Two of the [Formula: see text] CpGs mapped to FAM13A (cg00905156) and NOTCH4 (cg06849931) previously associated with lung function and asthma. Although these associations did not replicate in the smaller newborn sample, both CpGs were significant ([Formula: see text]) in 7- to 9-y-olds. For cg06849931, however, the direction of the association was inconsistent. Concurrent [Formula: see text] exposure was associated with a significantly higher NOTCH4 expression at age 16 y. We also identified several DMRs associated with either prenatal [Formula: see text] and or [Formula: see text] exposure, of which two [Formula: see text] DMRs, including H19 and MARCH11, replicated in newborns. CONCLUSIONS: Several differentially methylated CpGs and DMRs associated with prenatal PM exposure were identified in newborns, with annotation to genes previously implicated in lung-related outcomes. https://doi.org/10.1289/EHP4522.</abstract><pub>US DEPT HEALTH HUMAN SCIENCES PUBLIC HEALTH SCIENCE</pub><oa>free_for_read</oa></addata></record>
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title Prenatal Particulate Air Pollution and DNA Methylation in Newborns: An Epigenome-Wide Meta-Analysis
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