Modelling the interactions between ammonium and nitrate uptake in marine phytoplankton
An empirically based mathematical model is presented which can simulate the major features of the interactions between ammonium and nitrate transport and assimilation in phytoplankton. The model (ammonium-nitrate interaction model), which is configured to simulate a generic microalga rather than a s...
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Veröffentlicht in: | Philosophical transactions of the Royal Society of London. Series B. Biological sciences 1997-11, Vol.352 (1361), p.1625-1645 |
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container_title | Philosophical transactions of the Royal Society of London. Series B. Biological sciences |
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creator | Flynn, Kevin J. Fasham, Michael J. R. Hipkin, Charles R. |
description | An empirically based mathematical model is presented which can simulate the major features of the interactions between ammonium and nitrate transport and assimilation in phytoplankton. The model (ammonium-nitrate interaction model), which is configured to simulate a generic microalga rather than a specified species, is constructed on simplified biochemical bases. A major requirement for parametrization is that the N:C ratio of the algae must be known and that transport and internal pool sizes need to be expressed per unit of cell C. The model uses the size of an internal pool of an early organic product of N assimilation (glutamine) to regulate rapid responses in ammonium-nitrate interactions. The synthesis of enzymes for the reduction of nitrate through to ammonium is induced by the size of the internal nitrate pool and repressed by the size of the glutamine pool. The assimilation of intracellular ammonium (into glutamine) is considered to be a constitutive process subjected to regulation by the size of the glutamine pool. Longer term responses have been linked to the nutrient history of the cell using the N:C cell quota. N assimilation in darkness is made a function of the amount of surplus C present and thus only occurs at low values of N:C. The model can simulate both qualitative and quantitative temporal shifts in the ammonium-nitrate interaction, while inclusion of a derivation of the standard quota model enables a concurrent simulation of cell growth and changes in nutrient status. |
doi_str_mv | 10.1098/rstb.1997.0145 |
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The synthesis of enzymes for the reduction of nitrate through to ammonium is induced by the size of the internal nitrate pool and repressed by the size of the glutamine pool. The assimilation of intracellular ammonium (into glutamine) is considered to be a constitutive process subjected to regulation by the size of the glutamine pool. Longer term responses have been linked to the nutrient history of the cell using the N:C cell quota. N assimilation in darkness is made a function of the amount of surplus C present and thus only occurs at low values of N:C. 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R.</creatorcontrib><creatorcontrib>Hipkin, Charles R.</creatorcontrib><title>Modelling the interactions between ammonium and nitrate uptake in marine phytoplankton</title><title>Philosophical transactions of the Royal Society of London. Series B. Biological sciences</title><description>An empirically based mathematical model is presented which can simulate the major features of the interactions between ammonium and nitrate transport and assimilation in phytoplankton. The model (ammonium-nitrate interaction model), which is configured to simulate a generic microalga rather than a specified species, is constructed on simplified biochemical bases. A major requirement for parametrization is that the N:C ratio of the algae must be known and that transport and internal pool sizes need to be expressed per unit of cell C. The model uses the size of an internal pool of an early organic product of N assimilation (glutamine) to regulate rapid responses in ammonium-nitrate interactions. The synthesis of enzymes for the reduction of nitrate through to ammonium is induced by the size of the internal nitrate pool and repressed by the size of the glutamine pool. The assimilation of intracellular ammonium (into glutamine) is considered to be a constitutive process subjected to regulation by the size of the glutamine pool. Longer term responses have been linked to the nutrient history of the cell using the N:C cell quota. N assimilation in darkness is made a function of the amount of surplus C present and thus only occurs at low values of N:C. The model can simulate both qualitative and quantitative temporal shifts in the ammonium-nitrate interaction, while inclusion of a derivation of the standard quota model enables a concurrent simulation of cell growth and changes in nutrient status.</description><subject>Amino acids</subject><subject>Cell growth</subject><subject>Enzymes</subject><subject>Modeling</subject><subject>Nitrates</subject><subject>Nitrogen</subject><subject>Nutrient nutrient interactions</subject><subject>Phytoplankton</subject><subject>Quaternary ammonium compounds</subject><subject>Simulations</subject><issn>0962-8436</issn><issn>1471-2970</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1997</creationdate><recordtype>article</recordtype><recordid>eNp9Uk1v0zAYjhBIlMGVA6f8gRQ7dhL7goDyMaAV0hjj-MpO3NZtake2s5H9epwGVaoQO1nW8_m-dpK8xGiOEWevnQ9yjjmv5gjT4lEyw7TCWc4r9DiZIV7mGaOkfJo8836HEOJFRWfJzco2qm212aRhq1JtgnKiDtoan0oV7pQyqTgcrNH9IRWmSY0OTgSV9l0Q-1GQHoTTRqXddgi2a4XZB2ueJ0_WovXqxd_zIvn56eP14jJbfv_8ZfFumdUlRSGjdSMlrSSqm4LImkssCq5KJiUXkuVMRVreMF7iimMqc4aJQlIRqhiq1lSSi-TN5Nv18qCaWpnYroXO6dhqACs0nCNGb2FjbwGXPEcViwbzyaB21nun1ictRjCuFca1wrhWGNcaBX4SODvEyWytVRhgZ3tn4hWufly_j2R0S4pcY1JiQIxgRCkmHO51d7QbCRAJoL3vFRxp5zH_ppKHUv_b9dWk2vlg3WmyoiwKHMFsArUP6vcJFG4PZUWqAm4YhW8fvi5_LVZXsIr8txN_qzfbO-0UnHU5Rtc2_h8TjrMdp8JlXsC6b-OTNOtogR-0sEMXTc7E5A9Q_OaW</recordid><startdate>19971129</startdate><enddate>19971129</enddate><creator>Flynn, Kevin J.</creator><creator>Fasham, Michael J. 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R.</creatorcontrib><creatorcontrib>Hipkin, Charles R.</creatorcontrib><collection>Istex</collection><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Philosophical transactions of the Royal Society of London. Series B. Biological sciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Flynn, Kevin J.</au><au>Fasham, Michael J. R.</au><au>Hipkin, Charles R.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Modelling the interactions between ammonium and nitrate uptake in marine phytoplankton</atitle><jtitle>Philosophical transactions of the Royal Society of London. Series B. Biological sciences</jtitle><date>1997-11-29</date><risdate>1997</risdate><volume>352</volume><issue>1361</issue><spage>1625</spage><epage>1645</epage><pages>1625-1645</pages><issn>0962-8436</issn><eissn>1471-2970</eissn><abstract>An empirically based mathematical model is presented which can simulate the major features of the interactions between ammonium and nitrate transport and assimilation in phytoplankton. The model (ammonium-nitrate interaction model), which is configured to simulate a generic microalga rather than a specified species, is constructed on simplified biochemical bases. A major requirement for parametrization is that the N:C ratio of the algae must be known and that transport and internal pool sizes need to be expressed per unit of cell C. The model uses the size of an internal pool of an early organic product of N assimilation (glutamine) to regulate rapid responses in ammonium-nitrate interactions. The synthesis of enzymes for the reduction of nitrate through to ammonium is induced by the size of the internal nitrate pool and repressed by the size of the glutamine pool. The assimilation of intracellular ammonium (into glutamine) is considered to be a constitutive process subjected to regulation by the size of the glutamine pool. Longer term responses have been linked to the nutrient history of the cell using the N:C cell quota. N assimilation in darkness is made a function of the amount of surplus C present and thus only occurs at low values of N:C. The model can simulate both qualitative and quantitative temporal shifts in the ammonium-nitrate interaction, while inclusion of a derivation of the standard quota model enables a concurrent simulation of cell growth and changes in nutrient status.</abstract><pub>The Royal Society</pub><doi>10.1098/rstb.1997.0145</doi><tpages>21</tpages><oa>free_for_read</oa></addata></record> |
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source | Jstor Complete Legacy; PubMed Central |
subjects | Amino acids Cell growth Enzymes Modeling Nitrates Nitrogen Nutrient nutrient interactions Phytoplankton Quaternary ammonium compounds Simulations |
title | Modelling the interactions between ammonium and nitrate uptake in marine phytoplankton |
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