Directed self-organization of single DNA molecules in a nanoslit via embedded nanopit arrays

We show that arrays of nanopit structures etched in a nanoslit can control the positioning and conformation of single DNA molecules in nanofluidic devices. By adjusting the spacing, organization and placement of the nanopits it is possible to immobilize DNA at predetermined regions of a device witho...

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Veröffentlicht in:Proceedings of the National Academy of Sciences - PNAS 2009-01, Vol.106 (1), p.79-84
Hauptverfasser: Reisner, Walter, Larsen, Niels B, Flyvbjerg, Henrik, Tegenfeldt, Jonas O, Kristensen, Anders
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container_title Proceedings of the National Academy of Sciences - PNAS
container_volume 106
creator Reisner, Walter
Larsen, Niels B
Flyvbjerg, Henrik
Tegenfeldt, Jonas O
Kristensen, Anders
description We show that arrays of nanopit structures etched in a nanoslit can control the positioning and conformation of single DNA molecules in nanofluidic devices. By adjusting the spacing, organization and placement of the nanopits it is possible to immobilize DNA at predetermined regions of a device without additional chemical modification and achieve a high degree of control over local DNA conformation. DNA can be extended between two nanopits and in closely spaced arrays will self-assemble into "connect-the-dots" conformations consisting of locally pinned segments joined by fluctuating linkers. These results have broad implications for nanotechnology fields that require methods for the nanoscale positioning and manipulation of DNA.
doi_str_mv 10.1073/pnas.0811468106
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source MEDLINE; JSTOR Archive Collection A-Z Listing; PubMed Central; Alma/SFX Local Collection; Free Full-Text Journals in Chemistry
subjects Biological Sciences
Condensed Matter Physics
Den kondenserade materiens fysik
Dimers
DNA
DNA - chemistry
DNA conformation
Equipment Design
Fluorescence
Free energy
Fysik
Macromolecules
Microfluidic Analytical Techniques - instrumentation
Molecules
nanofluidics
Nanotechnology
Nanotechnology - instrumentation
Nanotechnology - methods
Natural Sciences
Naturvetenskap
Nucleic Acid Conformation
Physical Sciences
Physics
polymer confinement
Polymers
Self assembly
title Directed self-organization of single DNA molecules in a nanoslit via embedded nanopit arrays
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