systematic position of Phaeocryptopus gaeumannii

Phaeocryptopus gaeumannii, causal agent of the Douglas-fir foliar disease Swiss needle cast, is the only known pathogenic species of the genus. Current classifications place Phaeocryptopus in the Venturiaceae (Pleosporales), typified by the apple-scab pathogen Venturia inaequalis. All core members o...

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Veröffentlicht in:Mycologia 2007-03, Vol.99 (2), p.240-252
Hauptverfasser: Winton, L.M, Stone, J.K, Hansen, E.M, Shoemaker, R.A
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Stone, J.K
Hansen, E.M
Shoemaker, R.A
description Phaeocryptopus gaeumannii, causal agent of the Douglas-fir foliar disease Swiss needle cast, is the only known pathogenic species of the genus. Current classifications place Phaeocryptopus in the Venturiaceae (Pleosporales), typified by the apple-scab pathogen Venturia inaequalis. All core members of this family have hyphomycetous anamorphs. We sought to confirm these relationships by means of phylogenetic analyses of the small (SSU) and large (LSU) subunits and internal transcribed spacer (ITS) region of nuclear ribosomal gene sequences (nrDNA). Analyses indicated that both the genus Phaeocryptopus and the family Venturiaceae, as currently defined, are unnatural groups. Phaeocryptopus nudus, type of the genus, is aligned in the Dothioraceae (Dothideales) and P. gaeumannii in the Mycosphaerellaceae (Capnodiales) near species of Mycosphaerella and Rasutoria. Core representatives of Venturiaceae formed an unambiguous clade but ordinal placement was unresolved. The family apparently is not included in the Pleosporales, Dothideales, Myriangiales or Capnodiales. Coelomycetous Rhizosphaera form-species are accepted generally as anamorphic states of Phaeocryptopus, however the relationship never has been established conclusively. Species of Rhizosphaera are closely related to P. nudus but not to P. gaeumannii, supporting an anamorphteleomorph connection between Rhizosphaera and Phaeocryptopus and providing further evidence that P. gaeumanii is not congeneric with P. nudus.
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Coelomycetous Rhizosphaera form-species are accepted generally as anamorphic states of Phaeocryptopus, however the relationship never has been established conclusively. 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Current classifications place Phaeocryptopus in the Venturiaceae (Pleosporales), typified by the apple-scab pathogen Venturia inaequalis. All core members of this family have hyphomycetous anamorphs. We sought to confirm these relationships by means of phylogenetic analyses of the small (SSU) and large (LSU) subunits and internal transcribed spacer (ITS) region of nuclear ribosomal gene sequences (nrDNA). Analyses indicated that both the genus Phaeocryptopus and the family Venturiaceae, as currently defined, are unnatural groups. Phaeocryptopus nudus, type of the genus, is aligned in the Dothioraceae (Dothideales) and P. gaeumannii in the Mycosphaerellaceae (Capnodiales) near species of Mycosphaerella and Rasutoria. Core representatives of Venturiaceae formed an unambiguous clade but ordinal placement was unresolved. The family apparently is not included in the Pleosporales, Dothideales, Myriangiales or Capnodiales. Coelomycetous Rhizosphaera form-species are accepted generally as anamorphic states of Phaeocryptopus, however the relationship never has been established conclusively. Species of Rhizosphaera are closely related to P. nudus but not to P. gaeumannii, supporting an anamorphteleomorph connection between Rhizosphaera and Phaeocryptopus and providing further evidence that P. gaeumanii is not congeneric with P. nudus.</description><subject>Anamorphs</subject><subject>Ascomycota</subject><subject>Ascomycota - classification</subject><subject>Ascomycota - genetics</subject><subject>Biological taxonomies</subject><subject>Capnodiales</subject><subject>DNA, Fungal - chemistry</subject><subject>DNA, Fungal - genetics</subject><subject>DNA, Intergenic - chemistry</subject><subject>DNA, Intergenic - genetics</subject><subject>DNA, Ribosomal - chemistry</subject><subject>DNA, Ribosomal - genetics</subject><subject>Dothideales</subject><subject>Dothorioraceae</subject><subject>Fungi</subject><subject>Genera</subject><subject>internal transcribed spacers</subject><subject>Loculoascomycetes</subject><subject>Molecular Evolution and Systematics</subject><subject>Molecular Sequence Data</subject><subject>molecular systematics</subject><subject>Mycosphaerellaceae</subject><subject>nrDNA</subject><subject>Parsimony</subject><subject>Phaeocryptopus</subject><subject>Phaeocryptopus gaeumannii</subject><subject>Phaeocryptopus nudus</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>plant pathogenic fungi</subject><subject>Pseudotsuga - microbiology</subject><subject>Ribosomal DNA</subject><subject>RNA, Ribosomal, 18S - genetics</subject><subject>RNA, Ribosomal, 28S - genetics</subject><subject>sequence analysis</subject><subject>Sequence Analysis, DNA</subject><subject>Swiss needle cast</subject><subject>Taxa</subject><subject>Venturiaceae</subject><issn>0027-5514</issn><issn>1557-2536</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkM1q3DAUhUVJaaZpHyHJrLrzVFe_9jKE9AcCLbRZi2tZShVsy5Fsyrx9NXgmWXYlxHfO1dVHyBXQHdCafgYpNZNc7RilegdQcyZr8YZsDqA6kDOyoZTpSkoQ5-R9zk_lWih9R85Bq5pprTeE5n2e3YBzsNsp5jCHOG6j3_78gy7atJ_mOC15-4huGXAcQ_hA3nrss_t4PC_Iw5e737ffqvsfX7_f3txXtiyiK1TIeK2YA44StHOdbRuJylNlsVWKNxplY4VoG-scq7u2c51qfGsFeAmKX5BP69wpxefF5dkMIVvX9zi6uGSjahAArClBtQZtijkn582UwoBpb4CagytzcmUOrszJVSleHV9Y2sF1r7WjnBK4XANPeY7phTMqhKg5Lfxm5WH0MQ34N6a-MzPu-5h8wtGGbPh_l7heZ3iMBh9TqTz8YhQ4LSWQ5X__AM-Wi9Q</recordid><startdate>200703</startdate><enddate>200703</enddate><creator>Winton, L.M</creator><creator>Stone, J.K</creator><creator>Hansen, E.M</creator><creator>Shoemaker, R.A</creator><general>Taylor &amp; Francis</general><general>Mycologia Society of America</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>200703</creationdate><title>systematic position of Phaeocryptopus gaeumannii</title><author>Winton, L.M ; Stone, J.K ; Hansen, E.M ; Shoemaker, R.A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2587-a6a23862e13a517eedcb95a6f06cab66397a59c44b9cee28dbded69fbc41f5163</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Anamorphs</topic><topic>Ascomycota</topic><topic>Ascomycota - classification</topic><topic>Ascomycota - genetics</topic><topic>Biological taxonomies</topic><topic>Capnodiales</topic><topic>DNA, Fungal - chemistry</topic><topic>DNA, Fungal - genetics</topic><topic>DNA, Intergenic - chemistry</topic><topic>DNA, Intergenic - genetics</topic><topic>DNA, Ribosomal - chemistry</topic><topic>DNA, Ribosomal - genetics</topic><topic>Dothideales</topic><topic>Dothorioraceae</topic><topic>Fungi</topic><topic>Genera</topic><topic>internal transcribed spacers</topic><topic>Loculoascomycetes</topic><topic>Molecular Evolution and Systematics</topic><topic>Molecular Sequence Data</topic><topic>molecular systematics</topic><topic>Mycosphaerellaceae</topic><topic>nrDNA</topic><topic>Parsimony</topic><topic>Phaeocryptopus</topic><topic>Phaeocryptopus gaeumannii</topic><topic>Phaeocryptopus nudus</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>plant pathogenic fungi</topic><topic>Pseudotsuga - microbiology</topic><topic>Ribosomal DNA</topic><topic>RNA, Ribosomal, 18S - genetics</topic><topic>RNA, Ribosomal, 28S - genetics</topic><topic>sequence analysis</topic><topic>Sequence Analysis, DNA</topic><topic>Swiss needle cast</topic><topic>Taxa</topic><topic>Venturiaceae</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Winton, L.M</creatorcontrib><creatorcontrib>Stone, J.K</creatorcontrib><creatorcontrib>Hansen, E.M</creatorcontrib><creatorcontrib>Shoemaker, R.A</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Mycologia</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Winton, L.M</au><au>Stone, J.K</au><au>Hansen, E.M</au><au>Shoemaker, R.A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>systematic position of Phaeocryptopus gaeumannii</atitle><jtitle>Mycologia</jtitle><addtitle>Mycologia</addtitle><date>2007-03</date><risdate>2007</risdate><volume>99</volume><issue>2</issue><spage>240</spage><epage>252</epage><pages>240-252</pages><issn>0027-5514</issn><eissn>1557-2536</eissn><abstract>Phaeocryptopus gaeumannii, causal agent of the Douglas-fir foliar disease Swiss needle cast, is the only known pathogenic species of the genus. Current classifications place Phaeocryptopus in the Venturiaceae (Pleosporales), typified by the apple-scab pathogen Venturia inaequalis. All core members of this family have hyphomycetous anamorphs. We sought to confirm these relationships by means of phylogenetic analyses of the small (SSU) and large (LSU) subunits and internal transcribed spacer (ITS) region of nuclear ribosomal gene sequences (nrDNA). Analyses indicated that both the genus Phaeocryptopus and the family Venturiaceae, as currently defined, are unnatural groups. Phaeocryptopus nudus, type of the genus, is aligned in the Dothioraceae (Dothideales) and P. gaeumannii in the Mycosphaerellaceae (Capnodiales) near species of Mycosphaerella and Rasutoria. Core representatives of Venturiaceae formed an unambiguous clade but ordinal placement was unresolved. The family apparently is not included in the Pleosporales, Dothideales, Myriangiales or Capnodiales. Coelomycetous Rhizosphaera form-species are accepted generally as anamorphic states of Phaeocryptopus, however the relationship never has been established conclusively. Species of Rhizosphaera are closely related to P. nudus but not to P. gaeumannii, supporting an anamorphteleomorph connection between Rhizosphaera and Phaeocryptopus and providing further evidence that P. gaeumanii is not congeneric with P. nudus.</abstract><cop>England</cop><pub>Taylor &amp; Francis</pub><pmid>17682777</pmid><doi>10.1080/15572536.2007.11832584</doi><tpages>13</tpages></addata></record>
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subjects Anamorphs
Ascomycota
Ascomycota - classification
Ascomycota - genetics
Biological taxonomies
Capnodiales
DNA, Fungal - chemistry
DNA, Fungal - genetics
DNA, Intergenic - chemistry
DNA, Intergenic - genetics
DNA, Ribosomal - chemistry
DNA, Ribosomal - genetics
Dothideales
Dothorioraceae
Fungi
Genera
internal transcribed spacers
Loculoascomycetes
Molecular Evolution and Systematics
Molecular Sequence Data
molecular systematics
Mycosphaerellaceae
nrDNA
Parsimony
Phaeocryptopus
Phaeocryptopus gaeumannii
Phaeocryptopus nudus
Phylogenetics
Phylogeny
plant pathogenic fungi
Pseudotsuga - microbiology
Ribosomal DNA
RNA, Ribosomal, 18S - genetics
RNA, Ribosomal, 28S - genetics
sequence analysis
Sequence Analysis, DNA
Swiss needle cast
Taxa
Venturiaceae
title systematic position of Phaeocryptopus gaeumannii
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