A dual-stream deep convolutional network for reducing metal streak artifacts in CT images
Machine learning and deep learning are rapidly finding applications in the medical imaging field. In this paper, we address the long-standing problem of metal artifacts in computed tomography (CT) images by training a dual-stream deep convolutional neural network for streak removal. While many metal...
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Veröffentlicht in: | Physics in medicine & biology 2019-11, Vol.64 (23), p.235003-235003 |
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creator | Gjesteby, Lars Shan, Hongming Yang, Qingsong Xi, Yan Jin, Yannan Giantsoudi, Drosoula Paganetti, Harald De Man, Bruno Wang, Ge |
description | Machine learning and deep learning are rapidly finding applications in the medical imaging field. In this paper, we address the long-standing problem of metal artifacts in computed tomography (CT) images by training a dual-stream deep convolutional neural network for streak removal. While many metal artifact reduction methods exist, even state-of-the-art algorithms fall short in some clinical applications. Specifically, proton therapy planning requires high image quality with accurate tumor volumes to ensure treatment success. We explore a dual-stream deep network structure with residual learning to correct metal streak artifacts after a first-pass by a state-of-the-art interpolation-based algorithm, NMAR. We provide the network with a mask of the streaks in order to focus attention on those areas. Our experiments compare a mean squared error loss function with a perceptual loss function to emphasize preservation of image features and texture. Both visual and quantitative metrics are used to assess the resulting image quality for metal implant cases. Success may be due to the duality of information processing, with one network stream performing local structure correction, while the other stream provides an attention mechanism to destreak effectively. This study shows that image-domain deep learning can be highly effective for metal artifact reduction (MAR), and highlights the benefits and drawbacks of different loss functions for solving a major CT reconstruction challenge. |
doi_str_mv | 10.1088/1361-6560/ab4e3e |
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In this paper, we address the long-standing problem of metal artifacts in computed tomography (CT) images by training a dual-stream deep convolutional neural network for streak removal. While many metal artifact reduction methods exist, even state-of-the-art algorithms fall short in some clinical applications. Specifically, proton therapy planning requires high image quality with accurate tumor volumes to ensure treatment success. We explore a dual-stream deep network structure with residual learning to correct metal streak artifacts after a first-pass by a state-of-the-art interpolation-based algorithm, NMAR. We provide the network with a mask of the streaks in order to focus attention on those areas. Our experiments compare a mean squared error loss function with a perceptual loss function to emphasize preservation of image features and texture. Both visual and quantitative metrics are used to assess the resulting image quality for metal implant cases. Success may be due to the duality of information processing, with one network stream performing local structure correction, while the other stream provides an attention mechanism to destreak effectively. This study shows that image-domain deep learning can be highly effective for metal artifact reduction (MAR), and highlights the benefits and drawbacks of different loss functions for solving a major CT reconstruction challenge.</description><identifier>ISSN: 0031-9155</identifier><identifier>ISSN: 1361-6560</identifier><identifier>EISSN: 1361-6560</identifier><identifier>DOI: 10.1088/1361-6560/ab4e3e</identifier><identifier>PMID: 31618724</identifier><identifier>CODEN: PHMBA7</identifier><language>eng</language><publisher>England: IOP Publishing</publisher><subject>Algorithms ; Deep Learning ; Humans ; Image Processing, Computer-Assisted - methods ; Machine Learning ; metal artifact reduction ; Metals ; Neural Networks, Computer ; Pedicle Screws ; Prostheses and Implants ; Proton Therapy ; Reproducibility of Results ; Tomography, X-Ray Computed ; Visible Human Projects ; x-ray computed tomography</subject><ispartof>Physics in medicine & biology, 2019-11, Vol.64 (23), p.235003-235003</ispartof><rights>2019 Institute of Physics and Engineering in Medicine</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c336t-446c079cba1562e12d1692bd1c053d588ff091fe295ede0330a91dd0d8b1d3443</citedby><cites>FETCH-LOGICAL-c336t-446c079cba1562e12d1692bd1c053d588ff091fe295ede0330a91dd0d8b1d3443</cites><orcidid>0000-0002-2656-7705 ; 0000-0002-5021-7705 ; 0000-0002-0604-3197</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://iopscience.iop.org/article/10.1088/1361-6560/ab4e3e/pdf$$EPDF$$P50$$Giop$$H</linktopdf><link.rule.ids>314,776,780,27901,27902,53821,53868</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31618724$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gjesteby, Lars</creatorcontrib><creatorcontrib>Shan, Hongming</creatorcontrib><creatorcontrib>Yang, Qingsong</creatorcontrib><creatorcontrib>Xi, Yan</creatorcontrib><creatorcontrib>Jin, Yannan</creatorcontrib><creatorcontrib>Giantsoudi, Drosoula</creatorcontrib><creatorcontrib>Paganetti, Harald</creatorcontrib><creatorcontrib>De Man, Bruno</creatorcontrib><creatorcontrib>Wang, Ge</creatorcontrib><title>A dual-stream deep convolutional network for reducing metal streak artifacts in CT images</title><title>Physics in medicine & biology</title><addtitle>PMB</addtitle><addtitle>Phys. Med. Biol</addtitle><description>Machine learning and deep learning are rapidly finding applications in the medical imaging field. In this paper, we address the long-standing problem of metal artifacts in computed tomography (CT) images by training a dual-stream deep convolutional neural network for streak removal. While many metal artifact reduction methods exist, even state-of-the-art algorithms fall short in some clinical applications. Specifically, proton therapy planning requires high image quality with accurate tumor volumes to ensure treatment success. We explore a dual-stream deep network structure with residual learning to correct metal streak artifacts after a first-pass by a state-of-the-art interpolation-based algorithm, NMAR. We provide the network with a mask of the streaks in order to focus attention on those areas. Our experiments compare a mean squared error loss function with a perceptual loss function to emphasize preservation of image features and texture. Both visual and quantitative metrics are used to assess the resulting image quality for metal implant cases. Success may be due to the duality of information processing, with one network stream performing local structure correction, while the other stream provides an attention mechanism to destreak effectively. This study shows that image-domain deep learning can be highly effective for metal artifact reduction (MAR), and highlights the benefits and drawbacks of different loss functions for solving a major CT reconstruction challenge.</description><subject>Algorithms</subject><subject>Deep Learning</subject><subject>Humans</subject><subject>Image Processing, Computer-Assisted - methods</subject><subject>Machine Learning</subject><subject>metal artifact reduction</subject><subject>Metals</subject><subject>Neural Networks, Computer</subject><subject>Pedicle Screws</subject><subject>Prostheses and Implants</subject><subject>Proton Therapy</subject><subject>Reproducibility of Results</subject><subject>Tomography, X-Ray Computed</subject><subject>Visible Human Projects</subject><subject>x-ray computed tomography</subject><issn>0031-9155</issn><issn>1361-6560</issn><issn>1361-6560</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kD1PwzAQhi0EouVjZ0IeGQjcxbGbjFXFl1SJBQYmy7EvKDSJi52A-PektLAxnXT3vK9OD2NnCFcIeX6NQmGipIJrU2YkaI9N_1b7bAogMClQygk7ivENADFPs0M2Eagwn6XZlL3MuRtMk8Q-kGm5I1pz67sP3wx97TvT8I76Tx9WvPKBB3KDrbtX3lI_nn5CK25CX1fG9pHXHV888bo1rxRP2EFlmkinu3nMnm9vnhb3yfLx7mExXyZWCNUnWaYszApbGpQqJUwdqiItHVqQwsk8ryoosKK0kOQIhABToHPg8hKdyDJxzC62vevg3weKvW7raKlpTEd-iDoVoCTADOWIwha1wccYqNLrMD4bvjSC3gjVG3t6Y09vhY6R8137ULbk_gK_BkfgcgvUfq3f_BBGZ_H_vm-8xX9L</recordid><startdate>20191126</startdate><enddate>20191126</enddate><creator>Gjesteby, Lars</creator><creator>Shan, Hongming</creator><creator>Yang, Qingsong</creator><creator>Xi, Yan</creator><creator>Jin, Yannan</creator><creator>Giantsoudi, Drosoula</creator><creator>Paganetti, Harald</creator><creator>De Man, Bruno</creator><creator>Wang, Ge</creator><general>IOP Publishing</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-2656-7705</orcidid><orcidid>https://orcid.org/0000-0002-5021-7705</orcidid><orcidid>https://orcid.org/0000-0002-0604-3197</orcidid></search><sort><creationdate>20191126</creationdate><title>A dual-stream deep convolutional network for reducing metal streak artifacts in CT images</title><author>Gjesteby, Lars ; Shan, Hongming ; Yang, Qingsong ; Xi, Yan ; Jin, Yannan ; Giantsoudi, Drosoula ; Paganetti, Harald ; De Man, Bruno ; Wang, Ge</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c336t-446c079cba1562e12d1692bd1c053d588ff091fe295ede0330a91dd0d8b1d3443</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Algorithms</topic><topic>Deep Learning</topic><topic>Humans</topic><topic>Image Processing, Computer-Assisted - methods</topic><topic>Machine Learning</topic><topic>metal artifact reduction</topic><topic>Metals</topic><topic>Neural Networks, Computer</topic><topic>Pedicle Screws</topic><topic>Prostheses and Implants</topic><topic>Proton Therapy</topic><topic>Reproducibility of Results</topic><topic>Tomography, X-Ray Computed</topic><topic>Visible Human Projects</topic><topic>x-ray computed tomography</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gjesteby, Lars</creatorcontrib><creatorcontrib>Shan, Hongming</creatorcontrib><creatorcontrib>Yang, Qingsong</creatorcontrib><creatorcontrib>Xi, Yan</creatorcontrib><creatorcontrib>Jin, Yannan</creatorcontrib><creatorcontrib>Giantsoudi, Drosoula</creatorcontrib><creatorcontrib>Paganetti, Harald</creatorcontrib><creatorcontrib>De Man, Bruno</creatorcontrib><creatorcontrib>Wang, Ge</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Physics in medicine & biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gjesteby, Lars</au><au>Shan, Hongming</au><au>Yang, Qingsong</au><au>Xi, Yan</au><au>Jin, Yannan</au><au>Giantsoudi, Drosoula</au><au>Paganetti, Harald</au><au>De Man, Bruno</au><au>Wang, Ge</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A dual-stream deep convolutional network for reducing metal streak artifacts in CT images</atitle><jtitle>Physics in medicine & biology</jtitle><stitle>PMB</stitle><addtitle>Phys. Med. Biol</addtitle><date>2019-11-26</date><risdate>2019</risdate><volume>64</volume><issue>23</issue><spage>235003</spage><epage>235003</epage><pages>235003-235003</pages><issn>0031-9155</issn><issn>1361-6560</issn><eissn>1361-6560</eissn><coden>PHMBA7</coden><abstract>Machine learning and deep learning are rapidly finding applications in the medical imaging field. In this paper, we address the long-standing problem of metal artifacts in computed tomography (CT) images by training a dual-stream deep convolutional neural network for streak removal. While many metal artifact reduction methods exist, even state-of-the-art algorithms fall short in some clinical applications. Specifically, proton therapy planning requires high image quality with accurate tumor volumes to ensure treatment success. We explore a dual-stream deep network structure with residual learning to correct metal streak artifacts after a first-pass by a state-of-the-art interpolation-based algorithm, NMAR. We provide the network with a mask of the streaks in order to focus attention on those areas. Our experiments compare a mean squared error loss function with a perceptual loss function to emphasize preservation of image features and texture. Both visual and quantitative metrics are used to assess the resulting image quality for metal implant cases. Success may be due to the duality of information processing, with one network stream performing local structure correction, while the other stream provides an attention mechanism to destreak effectively. This study shows that image-domain deep learning can be highly effective for metal artifact reduction (MAR), and highlights the benefits and drawbacks of different loss functions for solving a major CT reconstruction challenge.</abstract><cop>England</cop><pub>IOP Publishing</pub><pmid>31618724</pmid><doi>10.1088/1361-6560/ab4e3e</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0002-2656-7705</orcidid><orcidid>https://orcid.org/0000-0002-5021-7705</orcidid><orcidid>https://orcid.org/0000-0002-0604-3197</orcidid></addata></record> |
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subjects | Algorithms Deep Learning Humans Image Processing, Computer-Assisted - methods Machine Learning metal artifact reduction Metals Neural Networks, Computer Pedicle Screws Prostheses and Implants Proton Therapy Reproducibility of Results Tomography, X-Ray Computed Visible Human Projects x-ray computed tomography |
title | A dual-stream deep convolutional network for reducing metal streak artifacts in CT images |
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